RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CUX1P39880 1505 aa6.12□□□□□ -1.43
HERC1-201ENST00000443617 TBC1D9Q6ZT07 1266 aa6.12□□□□□ -1.43
HERC1-201ENST00000443617 KDM5BQ9UGL1 1544 aa6.12□□□□□ -1.43
HERC1-201ENST00000443617 TIGD1Q96MW7 591 aa6.12□□□□□ -1.43
HERC1-201ENST00000443617 FAM184AQ8NB25 1140 aa6.12□□□□□ -1.43
HERC1-201ENST00000443617 C17orf53Q8N3J3 647 aaPredicted RBP6.12□□□□□ -1.43
HERC1-201ENST00000443617 ERBINQ96RT1 1412 aa6.12□□□□□ -1.43
HERC1-201ENST00000443617 NKTRP30414 1462 aaKnown RBP6.12□□□□□ -1.43
HERC1-201ENST00000443617 OGFRQ9NZT2 677 aa6.12□□□□□ -1.43
HERC1-201ENST00000443617 IPO4Q8TEX9 1081 aaKnown RBP6.12□□□□□ -1.43
HERC1-201ENST00000443617 MAPK8IP2Q13387 824 aaPredicted RBP6.11□□□□□ -1.43
HERC1-201ENST00000443617 FAM177BA6PVY3 158 aa6.11□□□□□ -1.43
HERC1-201ENST00000443617 ZMYM3Q14202 1370 aa6.11□□□□□ -1.43
HERC1-201ENST00000443617 ABCC5O15440 1437 aa6.11□□□□□ -1.43
HERC1-201ENST00000443617 MCCP23508 829 aa6.11□□□□□ -1.43
HERC1-201ENST00000443617 FEZ1Q99689 392 aa6.11□□□□□ -1.43
HERC1-201ENST00000443617 BMP2KLQ5H9B9 411 aa6.11□□□□□ -1.43
HERC1-201ENST00000443617 LMBRD1Q9NUN5 540 aa6.11□□□□□ -1.43
HERC1-201ENST00000443617 CADPSQ9ULU8 1353 aa6.11□□□□□ -1.43
HERC1-201ENST00000443617 SSH1Q8WYL5 1049 aa6.11□□□□□ -1.43
HERC1-201ENST00000443617 ZNF692Q9BU19 519 aaPredicted RBP6.11□□□□□ -1.43
HERC1-201ENST00000443617 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.11□□□□□ -1.439e-13■■□□□ 12.5
HERC1-201ENST00000443617 GTF2E1P29083 439 aaPredicted RBP6.11□□□□□ -1.43
HERC1-201ENST00000443617 U2SURPO15042 1029 aaKnown RBP6.1□□□□□ -1.43
HERC1-201ENST00000443617 ADCY5O95622 1261 aa6.1□□□□□ -1.43
HERC1-201ENST00000443617 ZNF830Q96NB3 372 aaPredicted RBP6.1□□□□□ -1.43
HERC1-201ENST00000443617 DMRT2Q9Y5R5 561 aa6.1□□□□□ -1.43
HERC1-201ENST00000443617 TEX14Q8IWB6 1497 aa6.1□□□□□ -1.43
HERC1-201ENST00000443617 ZSCAN20P17040 1043 aaPredicted RBP6.1□□□□□ -1.43
HERC1-201ENST00000443617 TAF7LQ5H9L4 462 aa6.1□□□□□ -1.43
HERC1-201ENST00000443617 GAS2L2Q8NHY3 880 aa6.1□□□□□ -1.43
HERC1-201ENST00000443617 IFT57Q9NWB7 429 aa6.1□□□□□ -1.43
HERC1-201ENST00000443617 UVSSAQ2YD98 709 aa6.1□□□□□ -1.43
HERC1-201ENST00000443617 LRSAM1Q6UWE0 723 aa6.09□□□□□ -1.43
HERC1-201ENST00000443617 VGLL3A8MV65 326 aa6.09□□□□□ -1.43
HERC1-201ENST00000443617 ATF7IPQ6VMQ6 1270 aa6.09□□□□□ -1.43
HERC1-201ENST00000443617 TDRD9Q8NDG6 1382 aaKnown RBP6.09□□□□□ -1.43
HERC1-201ENST00000443617 TRIM27P14373 513 aa6.09□□□□□ -1.43
HERC1-201ENST00000443617 DISP3Q9P2K9 1392 aa6.09□□□□□ -1.43
HERC1-201ENST00000443617 IGSF3O75054 1194 aa6.09□□□□□ -1.43
HERC1-201ENST00000443617 DDIT3P35638 169 aa6.09□□□□□ -1.43
HERC1-201ENST00000443617 CLEC17AQ6ZS10 378 aa6.09□□□□□ -1.43
HERC1-201ENST00000443617 PLCD3Q8N3E9 789 aa6.09□□□□□ -1.43
HERC1-201ENST00000443617 RBM42Q9BTD8 480 aaKnown RBP6.09□□□□□ -1.44
HERC1-201ENST00000443617 ATP2B3Q16720 1220 aa6.09□□□□□ -1.44
HERC1-201ENST00000443617 FOXD4L6Q3SYB3 417 aaPredicted RBP6.08□□□□□ -1.44
HERC1-201ENST00000443617 FOXD4L3Q6VB84 417 aaPredicted RBP6.08□□□□□ -1.44
HERC1-201ENST00000443617 TMEM57Q8N5G2 664 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 SPTLC3Q9NUV7 552 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 CALCOCO1Q9P1Z2 691 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 TSPYL1Q9H0U9 437 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 GOLGA6L4A6NEF3 574 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 TEX35Q5T0J7 233 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 ANKRD50Q9ULJ7 1429 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 APBB1O00213 710 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 INTS3Q68E01 1043 aaKnown RBP6.08□□□□□ -1.44
HERC1-201ENST00000443617 ZNF592Q92610 1267 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 CCDC183Q5T5S1 534 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 CCDC112Q8NEF3 446 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 ATP6V1DQ9Y5K8 247 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 KRT222Q8N1A0 295 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 NEK4P51957 841 aa6.08□□□□□ -1.44
HERC1-201ENST00000443617 GABPB1Q06547 395 aaPredicted RBP6.07□□□□□ -1.44
HERC1-201ENST00000443617 TSR2Q969E8 191 aaKnown RBP6.07□□□□□ -1.44
HERC1-201ENST00000443617 SPC24Q8NBT2 197 aa6.07□□□□□ -1.44
HERC1-201ENST00000443617 PIBF1Q8WXW3 757 aa6.07□□□□□ -1.44
HERC1-201ENST00000443617 GCC1Q96CN9 775 aa6.07□□□□□ -1.44
HERC1-201ENST00000443617 DAPK1P53355 1430 aa6.07□□□□□ -1.44
HERC1-201ENST00000443617 NOL8Q76FK4 1167 aaKnown RBP6.07□□□□□ -1.44
HERC1-201ENST00000443617 DNAJC2Q99543 621 aaKnown RBP6.07□□□□□ -1.44
HERC1-201ENST00000443617 HNRNPMP52272 730 aaKnown RBP eCLIP6.07□□□□□ -1.443e-6■■■■□ 21.8
HERC1-201ENST00000443617 TTC12Q9H892 705 aaPredicted RBP6.07□□□□□ -1.44
HERC1-201ENST00000443617 ZBTB40Q9NUA8 1239 aa6.07□□□□□ -1.44
HERC1-201ENST00000443617 RSPH4AQ5TD94 716 aa6.07□□□□□ -1.44
HERC1-201ENST00000443617 CCDC144AA2RUR9 1427 aa6.07□□□□□ -1.44
HERC1-201ENST00000443617 ERICH4A6NGS2 130 aa6.07□□□□□ -1.44
HERC1-201ENST00000443617 GPRASP1Q5JY77 1395 aa6.07□□□□□ -1.44
HERC1-201ENST00000443617 UHRF1BP1Q6BDS2 1440 aa6.07□□□□□ -1.44
HERC1-201ENST00000443617 USP26Q9BXU7 913 aa6.07□□□□□ -1.44
HERC1-201ENST00000443617 GPT2Q8TD30 523 aa6.07□□□□□ -1.44
HERC1-201ENST00000443617 MCM2P49736 904 aa6.06□□□□□ -1.44
HERC1-201ENST00000443617 TPD52L1Q16890 204 aaPredicted RBP6.06□□□□□ -1.44
HERC1-201ENST00000443617 PDLIM2Q96JY6 352 aa6.06□□□□□ -1.44
HERC1-201ENST00000443617 GPS2Q13227 327 aa6.06□□□□□ -1.44
HERC1-201ENST00000443617 EXOSC9Q06265 439 aaKnown RBP6.06□□□□□ -1.44
HERC1-201ENST00000443617 RALGAPBQ86X10 1494 aa6.06□□□□□ -1.44
HERC1-201ENST00000443617 MTHFSP49914 203 aa6.06□□□□□ -1.44
HERC1-201ENST00000443617 IBTKQ9P2D0 1353 aaPredicted RBP6.06□□□□□ -1.44
HERC1-201ENST00000443617 IRX3P78415 501 aaPredicted RBP6.05□□□□□ -1.44
HERC1-201ENST00000443617 TNNQ9UQP3 1299 aa6.05□□□□□ -1.44
HERC1-201ENST00000443617 CD2BP2O95400 341 aaKnown RBP6.05□□□□□ -1.44
HERC1-201ENST00000443617 BCL2L12Q9HB09 334 aa6.05□□□□□ -1.44
HERC1-201ENST00000443617 FBLN2P98095 1184 aa6.05□□□□□ -1.44
HERC1-201ENST00000443617 CCDC27Q2M243 656 aa6.05□□□□□ -1.44
HERC1-201ENST00000443617 C1orf115Q9H7X2 142 aa6.05□□□□□ -1.44
HERC1-201ENST00000443617 TRIM5Q9C035 493 aa6.05□□□□□ -1.44
HERC1-201ENST00000443617 EFCAB5A4FU69 1503 aa6.05□□□□□ -1.44
HERC1-201ENST00000443617 CCDC192P0DO97 292 aa6.05□□□□□ -1.44
HERC1-201ENST00000443617 USP25Q9UHP3 1055 aa6.05□□□□□ -1.44
HERC1-201ENST00000443617 USP48Q86UV5 1035 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms