RNA–Protein interactions for RNA: ENST00000442447.5

RBM39-215, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-215ENST00000442447 DDX17Q92841 729 aaKnown RBP23.58■■□□□ 1.37
RBM39-215ENST00000442447 STAC3Q96MF2 364 aa23.57■■□□□ 1.36
RBM39-215ENST00000442447 ADGRB1O14514 1584 aa23.57■■□□□ 1.36
RBM39-215ENST00000442447 SIRT1Q96EB6 747 aa23.56■■□□□ 1.36
RBM39-215ENST00000442447 ORAI2Q96SN7 254 aa23.56■■□□□ 1.36
RBM39-215ENST00000442447 PRAM1Q96QH2 718 aa23.53■■□□□ 1.36
RBM39-215ENST00000442447 SHPRHQ149N8 1683 aa23.53■■□□□ 1.36
RBM39-215ENST00000442447 DLC1Q96QB1 1528 aa23.52■■□□□ 1.36
RBM39-215ENST00000442447 NUTM2FA1L443 756 aa23.51■■□□□ 1.35
RBM39-215ENST00000442447 SAFB2Q14151 953 aaKnown RBP eCLIP23.51■■□□□ 1.35
RBM39-215ENST00000442447 TRAK1Q9UPV9 953 aa23.51■■□□□ 1.35
RBM39-215ENST00000442447 SPATA31A6Q5VVP1 1343 aa23.51■■□□□ 1.35
RBM39-215ENST00000442447 ESCO1Q5FWF5 840 aa23.5■■□□□ 1.35
RBM39-215ENST00000442447 RGS17Q9UGC6 210 aaPredicted RBP23.5■■□□□ 1.35
RBM39-215ENST00000442447 LRP6O75581 1613 aa23.49■■□□□ 1.35
RBM39-215ENST00000442447 TRIM26Q12899 539 aaPredicted RBP23.49■■□□□ 1.35
RBM39-215ENST00000442447 LRRC59Q96AG4 307 aaKnown RBP23.49■■□□□ 1.35
RBM39-215ENST00000442447 POGKQ9P215 609 aa23.49■■□□□ 1.35
RBM39-215ENST00000442447 FMN2Q9NZ56 1722 aa23.48■■□□□ 1.35
RBM39-215ENST00000442447 SIN3AQ96ST3 1273 aa23.46■■□□□ 1.35
RBM39-215ENST00000442447 SOS2Q07890 1332 aaPredicted RBP23.45■■□□□ 1.34
RBM39-215ENST00000442447 SOCS7O14512 581 aa23.45■■□□□ 1.34
RBM39-215ENST00000442447 PNPLA6Q8IY17 1366 aa23.44■■□□□ 1.34
RBM39-215ENST00000442447 NUTM2BA6NNL0 878 aaPredicted RBP23.44■■□□□ 1.34
RBM39-215ENST00000442447 NUTM2EB1AL46 878 aaPredicted RBP23.44■■□□□ 1.34
RBM39-215ENST00000442447 MEX3CQ5U5Q3 659 aaKnown RBP23.44■■□□□ 1.34
RBM39-215ENST00000442447 NUTM2AQ8IVF1 878 aaPredicted RBP23.44■■□□□ 1.34
RBM39-215ENST00000442447 NPHP3Q7Z494 1330 aa23.42■■□□□ 1.34
RBM39-215ENST00000442447 NEUROD1Q13562 356 aa23.42■■□□□ 1.34
RBM39-215ENST00000442447 FOXO3O43524 673 aa23.41■■□□□ 1.34
RBM39-215ENST00000442447 ADGRB2O60241 1585 aa23.4■■□□□ 1.34
RBM39-215ENST00000442447 KIAA1210Q9ULL0 1709 aa23.4■■□□□ 1.34
RBM39-215ENST00000442447 L3MBTL2Q969R5 705 aa23.4■■□□□ 1.34
RBM39-215ENST00000442447 HIRIP3Q9BW71 556 aaPredicted RBP23.4■■□□□ 1.34
RBM39-215ENST00000442447 MINK1Q8N4C8 1332 aaPredicted RBP23.39■■□□□ 1.34
RBM39-215ENST00000442447 PXDNQ92626 1479 aa23.39■■□□□ 1.34
RBM39-215ENST00000442447 XPCQ01831 940 aaPredicted RBP23.39■■□□□ 1.33
RBM39-215ENST00000442447 POTEAQ6S8J7 498 aa23.39■■□□□ 1.33
RBM39-215ENST00000442447 ARHGEF28Q8N1W1 1705 aaKnown RBP23.39■■□□□ 1.33
RBM39-215ENST00000442447 KIF1AQ12756 1690 aa23.38■■□□□ 1.33
RBM39-215ENST00000442447 NBPF1Q3BBV0 1214 aa23.37■■□□□ 1.33
RBM39-215ENST00000442447 RGPD8O14715 1765 aaPredicted RBP23.36■■□□□ 1.33
RBM39-215ENST00000442447 ANKARQ7Z5J8 1434 aa23.34■■□□□ 1.33
RBM39-215ENST00000442447 PHF8Q9UPP1 1060 aa23.34■■□□□ 1.33
RBM39-215ENST00000442447 USP32Q8NFA0 1604 aa23.33■■□□□ 1.33
RBM39-215ENST00000442447 WASLO00401 505 aaPredicted RBP23.31■■□□□ 1.32
RBM39-215ENST00000442447 COL22A1Q8NFW1 1626 aaPredicted RBP23.3■■□□□ 1.32
RBM39-215ENST00000442447 EIF3AQ14152 1382 aaKnown RBP23.3■■□□□ 1.32
RBM39-215ENST00000442447 TULP4Q9NRJ4 1543 aa23.3■■□□□ 1.32
RBM39-215ENST00000442447 PRR36Q9H6K5 1346 aa23.3■■□□□ 1.32
RBM39-215ENST00000442447 ADAMTS2O95450 1211 aa23.29■■□□□ 1.32
RBM39-215ENST00000442447 ZNF772Q68DY9 489 aaPredicted RBP23.29■■□□□ 1.32
RBM39-215ENST00000442447 KRT28Q7Z3Y7 464 aa23.29■■□□□ 1.32
RBM39-215ENST00000442447 C8orf37Q96NL8 207 aa23.29■■□□□ 1.32
RBM39-215ENST00000442447 PMFBP1Q8TBY8 1022 aa23.28■■□□□ 1.32
RBM39-215ENST00000442447 AFF2P51816 1311 aa23.28■■□□□ 1.32
RBM39-215ENST00000442447 SPATA31A3Q5VYP0 1347 aa23.27■■□□□ 1.32
RBM39-215ENST00000442447 TRPM1Q7Z4N2 1603 aa23.26■■□□□ 1.31
RBM39-215ENST00000442447 PSME1Q06323 249 aa23.24■■□□□ 1.31
RBM39-215ENST00000442447 TNS3Q68CZ2 1445 aa23.24■■□□□ 1.31
RBM39-215ENST00000442447 ATP7BP35670 1465 aa23.23■■□□□ 1.31
RBM39-215ENST00000442447 NGLY1Q96IV0 654 aa23.22■■□□□ 1.31
RBM39-215ENST00000442447 CDK19Q9BWU1 502 aa23.22■■□□□ 1.31
RBM39-215ENST00000442447 CENPJQ9HC77 1338 aaPredicted RBP23.22■■□□□ 1.31
RBM39-215ENST00000442447 SBNO1A3KN83 1393 aa23.21■■□□□ 1.31
RBM39-215ENST00000442447 ROCK2O75116 1388 aaKnown RBP23.21■■□□□ 1.31
RBM39-215ENST00000442447 TONSLQ96HA7 1378 aa23.2■■□□□ 1.3
RBM39-215ENST00000442447 NBPF8Q3BBV2 869 aa23.2■■□□□ 1.3
RBM39-215ENST00000442447 NUDT16Q96DE0 195 aaKnown RBP23.2■■□□□ 1.3
RBM39-215ENST00000442447 GPRASP1Q5JY77 1395 aa23.18■■□□□ 1.3
RBM39-215ENST00000442447 LMOD2Q6P5Q4 547 aa23.18■■□□□ 1.3
RBM39-215ENST00000442447 ITSN1Q15811 1721 aa23.18■■□□□ 1.3
RBM39-215ENST00000442447 QRICH2Q9H0J4 1663 aa23.18■■□□□ 1.3
RBM39-215ENST00000442447 NGDNQ8NEJ9 315 aaKnown RBP23.17■■□□□ 1.3
RBM39-215ENST00000442447 PLEKHG5O94827 1062 aa23.16■■□□□ 1.3
RBM39-215ENST00000442447 RXRBP28702 533 aa23.16■■□□□ 1.3
RBM39-215ENST00000442447 TRPM3Q9HCF6 1732 aaPredicted RBP23.16■■□□□ 1.3
RBM39-215ENST00000442447 ARHGEF10O15013 1369 aa23.15■■□□□ 1.3
RBM39-215ENST00000442447 MARF1Q9Y4F3 1742 aaKnown RBP23.14■■□□□ 1.3
RBM39-215ENST00000442447 TOPAZ1Q8N9V7 1692 aa23.14■■□□□ 1.29
RBM39-215ENST00000442447 CABLES1Q8TDN4 633 aa23.14■■□□□ 1.29
RBM39-215ENST00000442447 QTRT2Q9H974 415 aaKnown RBP23.14■■□□□ 1.29
RBM39-215ENST00000442447 USP21Q9UK80 565 aa23.14■■□□□ 1.29
RBM39-215ENST00000442447 SRPK2P78362 688 aaKnown RBP23.13■■□□□ 1.29
RBM39-215ENST00000442447 FNBP4Q8N3X1 1017 aaPredicted RBP23.13■■□□□ 1.29
RBM39-215ENST00000442447 HAP1P54257 671 aaPredicted RBP23.12■■□□□ 1.29
RBM39-215ENST00000442447 CCDC61Q9Y6R9 512 aa23.12■■□□□ 1.29
RBM39-215ENST00000442447 CABP2Q9NPB3 220 aa23.11■■□□□ 1.29
RBM39-215ENST00000442447 ALS2Q96Q42 1657 aa23.1■■□□□ 1.29
RBM39-215ENST00000442447 ABCA3Q99758 1704 aa23.1■■□□□ 1.29
RBM39-215ENST00000442447 RALGAPBQ86X10 1494 aa23.1■■□□□ 1.29
RBM39-215ENST00000442447 PAK3O75914 559 aaPredicted RBP23.09■■□□□ 1.29
RBM39-215ENST00000442447 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
RBM39-215ENST00000442447 ACEP12821 1306 aa23.08■■□□□ 1.29
RBM39-215ENST00000442447 RBM6P78332 1123 aaKnown RBP23.08■■□□□ 1.29
RBM39-215ENST00000442447 CARD11Q9BXL7 1154 aa23.08■■□□□ 1.29
RBM39-215ENST00000442447 POLR3AO14802 1390 aaPredicted RBP23.08■■□□□ 1.29
RBM39-215ENST00000442447 BCL9LQ86UU0 1499 aa23.08■■□□□ 1.29
RBM39-215ENST00000442447 CDK12Q9NYV4 1490 aaPredicted RBP23.08■■□□□ 1.29
RBM39-215ENST00000442447 PPIP5K1Q6PFW1 1433 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms