RNA–Protein interactions for RNA: ENST00000442034.5

RAB3GAP1-203, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-203ENST00000442034 CABP2Q9NPB3 220 aa11.58□□□□□ -0.56
RAB3GAP1-203ENST00000442034 PIK3C2GO75747 1445 aa11.58□□□□□ -0.56
RAB3GAP1-203ENST00000442034 MSNP26038 577 aaKnown RBP11.58□□□□□ -0.56
RAB3GAP1-203ENST00000442034 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.58□□□□□ -0.56
RAB3GAP1-203ENST00000442034 LNPKQ9C0E8 428 aa11.58□□□□□ -0.56
RAB3GAP1-203ENST00000442034 EIF4G3O43432 1585 aaKnown RBP11.57□□□□□ -0.56
RAB3GAP1-203ENST00000442034 IGHDP01880 384 aa11.57□□□□□ -0.56
RAB3GAP1-203ENST00000442034 ZMYM4Q5VZL5 1548 aa11.57□□□□□ -0.56
RAB3GAP1-203ENST00000442034 PTMAP06454 111 aaKnown RBP11.57□□□□□ -0.56
RAB3GAP1-203ENST00000442034 FAM43AQ8N2R8 423 aa11.57□□□□□ -0.56
RAB3GAP1-203ENST00000442034 ANO8Q9HCE9 1232 aaPredicted RBP11.57□□□□□ -0.56
RAB3GAP1-203ENST00000442034 KDM2BQ8NHM5 1336 aa11.57□□□□□ -0.56
RAB3GAP1-203ENST00000442034 HDGFP51858 240 aaKnown RBP11.57□□□□□ -0.56
RAB3GAP1-203ENST00000442034 FOXD4L1Q9NU39 408 aa11.57□□□□□ -0.56
RAB3GAP1-203ENST00000442034 RPGRIP1LQ68CZ1 1315 aa11.56□□□□□ -0.56
RAB3GAP1-203ENST00000442034 ADGRF5Q8IZF2 1346 aa11.56□□□□□ -0.56
RAB3GAP1-203ENST00000442034 MCCP23508 829 aa11.56□□□□□ -0.56
RAB3GAP1-203ENST00000442034 TSR2Q969E8 191 aaKnown RBP11.56□□□□□ -0.56
RAB3GAP1-203ENST00000442034 APBB1O00213 710 aa11.56□□□□□ -0.56
RAB3GAP1-203ENST00000442034 ELL2O00472 640 aaPredicted RBP11.56□□□□□ -0.56
RAB3GAP1-203ENST00000442034 ATF7IPQ6VMQ6 1270 aa11.56□□□□□ -0.56
RAB3GAP1-203ENST00000442034 LRRIQ1Q96JM4 1722 aa11.55□□□□□ -0.56
RAB3GAP1-203ENST00000442034 NPC1L1Q9UHC9 1359 aa11.55□□□□□ -0.56
RAB3GAP1-203ENST00000442034 TRAK2O60296 914 aa11.55□□□□□ -0.56
RAB3GAP1-203ENST00000442034 PLCH2O75038 1416 aa11.55□□□□□ -0.56
RAB3GAP1-203ENST00000442034 ABCC10Q5T3U5 1492 aa11.55□□□□□ -0.56
RAB3GAP1-203ENST00000442034 MRE11P49959 708 aa11.55□□□□□ -0.56
RAB3GAP1-203ENST00000442034 API5Q9BZZ5 524 aaKnown RBP11.55□□□□□ -0.56
RAB3GAP1-203ENST00000442034 HMMRO75330 724 aa11.54□□□□□ -0.56
RAB3GAP1-203ENST00000442034 BCORL1Q5H9F3 1711 aa11.54□□□□□ -0.56
RAB3GAP1-203ENST00000442034 ARHGEF5Q12774 1597 aa11.54□□□□□ -0.56
RAB3GAP1-203ENST00000442034 RTF1Q92541 710 aaKnown RBP11.54□□□□□ -0.56
RAB3GAP1-203ENST00000442034 NOB1Q9ULX3 412 aaKnown RBP11.54□□□□□ -0.56
RAB3GAP1-203ENST00000442034 GNAI1P63096 354 aa11.53□□□□□ -0.56
RAB3GAP1-203ENST00000442034 ST18O60284 1047 aa11.53□□□□□ -0.56
RAB3GAP1-203ENST00000442034 MCM4P33991 863 aa11.53□□□□□ -0.56
RAB3GAP1-203ENST00000442034 DDX49Q9Y6V7 483 aaKnown RBP11.53□□□□□ -0.56
RAB3GAP1-203ENST00000442034 POLR3AO14802 1390 aaPredicted RBP11.52□□□□□ -0.56
RAB3GAP1-203ENST00000442034 TMPOP42166 694 aaKnown RBP11.52□□□□□ -0.57
RAB3GAP1-203ENST00000442034 CEP170Q5SW79 1584 aa11.51□□□□□ -0.57
RAB3GAP1-203ENST00000442034 GCC1Q96CN9 775 aa11.51□□□□□ -0.57
RAB3GAP1-203ENST00000442034 KDM5DQ9BY66 1539 aa11.51□□□□□ -0.57
RAB3GAP1-203ENST00000442034 TBC1D32Q96NH3 1257 aa11.51□□□□□ -0.57
RAB3GAP1-203ENST00000442034 TBC1D2Q9BYX2 928 aa11.51□□□□□ -0.57
RAB3GAP1-203ENST00000442034 SPINK5Q9NQ38 1064 aaPredicted RBP11.51□□□□□ -0.57
RAB3GAP1-203ENST00000442034 PLEKHG5O94827 1062 aa11.5□□□□□ -0.57
RAB3GAP1-203ENST00000442034 COG3Q96JB2 828 aa11.5□□□□□ -0.57
RAB3GAP1-203ENST00000442034 ISY1Q9ULR0 285 aaKnown RBP11.5□□□□□ -0.57
RAB3GAP1-203ENST00000442034 DNTTIP2Q5QJE6 756 aaKnown RBP11.5□□□□□ -0.57
RAB3GAP1-203ENST00000442034 ZNF428Q96B54 188 aa11.5□□□□□ -0.57
RAB3GAP1-203ENST00000442034 PCDHB15Q9Y5E8 787 aa11.49□□□□□ -0.57
RAB3GAP1-203ENST00000442034 SOX12O15370 315 aa11.49□□□□□ -0.57
RAB3GAP1-203ENST00000442034 CARD14Q9BXL6 1004 aa11.49□□□□□ -0.57
RAB3GAP1-203ENST00000442034 CDC45O75419 566 aa11.49□□□□□ -0.57
RAB3GAP1-203ENST00000442034 PRKAR2BP31323 418 aa11.49□□□□□ -0.57
RAB3GAP1-203ENST00000442034 CCDC27Q2M243 656 aa11.49□□□□□ -0.57
RAB3GAP1-203ENST00000442034 SSH1Q8WYL5 1049 aa11.49□□□□□ -0.57
RAB3GAP1-203ENST00000442034 C14orf93Q9H972 538 aaKnown RBP11.49□□□□□ -0.57
RAB3GAP1-203ENST00000442034 HMOX1P09601 288 aa11.49□□□□□ -0.57
RAB3GAP1-203ENST00000442034 STK31Q9BXU1 1019 aa11.49□□□□□ -0.57
RAB3GAP1-203ENST00000442034 TRAPPC8Q9Y2L5 1435 aa11.48□□□□□ -0.57
RAB3GAP1-203ENST00000442034 ABCC11Q96J66 1382 aa11.48□□□□□ -0.57
RAB3GAP1-203ENST00000442034 NSD2O96028 1365 aa11.48□□□□□ -0.57
RAB3GAP1-203ENST00000442034 REC8O95072 547 aa11.48□□□□□ -0.57
RAB3GAP1-203ENST00000442034 CHD1LQ86WJ1 897 aa11.48□□□□□ -0.57
RAB3GAP1-203ENST00000442034 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
RAB3GAP1-203ENST00000442034 ATAD2Q6PL18 1390 aa11.48□□□□□ -0.57
RAB3GAP1-203ENST00000442034 NUCB2P80303 420 aa11.48□□□□□ -0.57
RAB3GAP1-203ENST00000442034 TMEM57Q8N5G2 664 aa11.48□□□□□ -0.57
RAB3GAP1-203ENST00000442034 SLC52A1Q9NWF4 448 aa11.48□□□□□ -0.57
RAB3GAP1-203ENST00000442034 ABCA8O94911 1581 aa11.48□□□□□ -0.57
RAB3GAP1-203ENST00000442034 SYAP1Q96A49 352 aaPredicted RBP11.47□□□□□ -0.57
RAB3GAP1-203ENST00000442034 NOS1P29475 1434 aa11.47□□□□□ -0.57
RAB3GAP1-203ENST00000442034 SLC4A10Q6U841 1118 aa11.47□□□□□ -0.57
RAB3GAP1-203ENST00000442034 PRAM1Q96QH2 718 aa11.47□□□□□ -0.57
RAB3GAP1-203ENST00000442034 FCHSD2O94868 740 aa11.47□□□□□ -0.57
RAB3GAP1-203ENST00000442034 INTS3Q68E01 1043 aaKnown RBP11.47□□□□□ -0.57
RAB3GAP1-203ENST00000442034 ADGRL1O94910 1474 aa11.47□□□□□ -0.57
RAB3GAP1-203ENST00000442034 A0A0G2JS52 829 aa11.46□□□□□ -0.57
RAB3GAP1-203ENST00000442034 MAST1Q9Y2H9 1570 aa11.46□□□□□ -0.57
RAB3GAP1-203ENST00000442034 TRIM27P14373 513 aa11.46□□□□□ -0.58
RAB3GAP1-203ENST00000442034 ZNF521Q96K83 1311 aa11.46□□□□□ -0.58
RAB3GAP1-203ENST00000442034 POLR1AO95602 1720 aaPredicted RBP11.46□□□□□ -0.58
RAB3GAP1-203ENST00000442034 RTEL1-TNFRSF6BF6WH68 1400 aa11.46□□□□□ -0.58
RAB3GAP1-203ENST00000442034 MAGI2Q86UL8 1455 aa11.45□□□□□ -0.58
RAB3GAP1-203ENST00000442034 OS9Q13438 667 aaPredicted RBP11.45□□□□□ -0.58
RAB3GAP1-203ENST00000442034 HSP90AA2PQ14568 343 aaPredicted RBP11.45□□□□□ -0.58
RAB3GAP1-203ENST00000442034 ALDH1L2Q3SY69 923 aa11.45□□□□□ -0.58
RAB3GAP1-203ENST00000442034 FANCAO15360 1455 aa11.45□□□□□ -0.58
RAB3GAP1-203ENST00000442034 TRMT2AQ8IZ69 625 aaKnown RBP11.45□□□□□ -0.58
RAB3GAP1-203ENST00000442034 ADCY10Q96PN6 1610 aa11.45□□□□□ -0.58
RAB3GAP1-203ENST00000442034 TPRNQ4KMQ1 711 aa11.45□□□□□ -0.58
RAB3GAP1-203ENST00000442034 TRIM6-TRIM34B2RNG4 842 aa11.44□□□□□ -0.58
RAB3GAP1-203ENST00000442034 HDAC1Q13547 482 aaPredicted RBP11.44□□□□□ -0.58
RAB3GAP1-203ENST00000442034 TWISTNBQ3B726 338 aaPredicted RBP11.44□□□□□ -0.58
RAB3GAP1-203ENST00000442034 KIAA1211Q6ZU35 1233 aa11.44□□□□□ -0.58
RAB3GAP1-203ENST00000442034 CABP1Q9NZU7 370 aa11.44□□□□□ -0.58
RAB3GAP1-203ENST00000442034 SEC24BO95487 1268 aa11.44□□□□□ -0.58
RAB3GAP1-203ENST00000442034 RLBP1P12271 317 aa11.44□□□□□ -0.58
RAB3GAP1-203ENST00000442034 GRPEL1Q9HAV7 217 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms