RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 MLH3Q9UHC1 1453 aa5.69□□□□□ -1.5
HMGB1P37-201ENST00000439613 ANKRD30BQ9BXX2 1392 aa5.68□□□□□ -1.5
HMGB1P37-201ENST00000439613 KDM5CP41229 1560 aa5.68□□□□□ -1.5
HMGB1P37-201ENST00000439613 IQGAP3Q86VI3 1631 aa5.68□□□□□ -1.5
HMGB1P37-201ENST00000439613 EIF2AK4Q9P2K8 1649 aaKnown RBP5.68□□□□□ -1.5
HMGB1P37-201ENST00000439613 SNPHO15079 494 aa5.68□□□□□ -1.5
HMGB1P37-201ENST00000439613 TBC1D12O60347 775 aa5.68□□□□□ -1.5
HMGB1P37-201ENST00000439613 SLC34A2O95436 690 aa5.68□□□□□ -1.5
HMGB1P37-201ENST00000439613 UPF1Q92900 1129 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P37-201ENST00000439613 ARIH1Q9Y4X5 557 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P37-201ENST00000439613 KANK1Q14678 1352 aa5.67□□□□□ -1.5
HMGB1P37-201ENST00000439613 DHX29Q7Z478 1369 aaKnown RBP5.67□□□□□ -1.5
HMGB1P37-201ENST00000439613 KIDINS220Q9ULH0 1771 aa5.67□□□□□ -1.5
HMGB1P37-201ENST00000439613 KIF13AQ9H1H9 1805 aa5.67□□□□□ -1.5
HMGB1P37-201ENST00000439613 MAGI2Q86UL8 1455 aa5.67□□□□□ -1.5
HMGB1P37-201ENST00000439613 ZNF316A6NFI3 1004 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P37-201ENST00000439613 PPP1R15AO75807 674 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P37-201ENST00000439613 MAP3K9P80192 1104 aa5.67□□□□□ -1.5
HMGB1P37-201ENST00000439613 DOK7Q18PE1 504 aa5.67□□□□□ -1.5
HMGB1P37-201ENST00000439613 PTCD2Q8WV60 388 aaKnown RBP5.67□□□□□ -1.5
HMGB1P37-201ENST00000439613 FAM135AQ9P2D6 1515 aa5.67□□□□□ -1.5
HMGB1P37-201ENST00000439613 HECW2Q9P2P5 1572 aa5.67□□□□□ -1.5
HMGB1P37-201ENST00000439613 DEPDC5O75140 1603 aa5.66□□□□□ -1.5
HMGB1P37-201ENST00000439613 TSPOAP1O95153 1857 aa5.66□□□□□ -1.5
HMGB1P37-201ENST00000439613 RPRD2Q5VT52 1461 aaKnown RBP5.66□□□□□ -1.5
HMGB1P37-201ENST00000439613 RICTORQ6R327 1708 aa5.66□□□□□ -1.5
HMGB1P37-201ENST00000439613 DPYSL4O14531 572 aa5.66□□□□□ -1.5
HMGB1P37-201ENST00000439613 HOXB3P14651 431 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P37-201ENST00000439613 OXER1Q8TDS5 423 aa5.66□□□□□ -1.5
HMGB1P37-201ENST00000439613 BCORL1Q5H9F3 1711 aa5.65□□□□□ -1.5
HMGB1P37-201ENST00000439613 A2MP01023 1474 aa5.65□□□□□ -1.5
HMGB1P37-201ENST00000439613 RIMBP2O15034 1052 aa5.65□□□□□ -1.5
HMGB1P37-201ENST00000439613 SEMA3EO15041 775 aa5.65□□□□□ -1.5
HMGB1P37-201ENST00000439613 ZNF710Q8N1W2 664 aa5.65□□□□□ -1.5
HMGB1P37-201ENST00000439613 PPRC1Q5VV67 1664 aaKnown RBP5.65□□□□□ -1.51
HMGB1P37-201ENST00000439613 ZMYM4Q5VZL5 1548 aa5.64□□□□□ -1.51
HMGB1P37-201ENST00000439613 RNF17Q9BXT8 1623 aaKnown RBP5.64□□□□□ -1.51
HMGB1P37-201ENST00000439613 TET3O43151 1660 aa5.64□□□□□ -1.51
HMGB1P37-201ENST00000439613 KIF3BO15066 747 aa5.64□□□□□ -1.51
HMGB1P37-201ENST00000439613 PRKCSHP14314 528 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P37-201ENST00000439613 ZSWIM6Q9HCJ5 1215 aa5.64□□□□□ -1.51
HMGB1P37-201ENST00000439613 PCDHGA4Q9Y5G9 962 aa5.64□□□□□ -1.51
HMGB1P37-201ENST00000439613 ATP10AO60312 1499 aa5.64□□□□□ -1.51
HMGB1P37-201ENST00000439613 PRDM15P57071 1507 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P37-201ENST00000439613 ABCA6Q8N139 1617 aa5.63□□□□□ -1.51
HMGB1P37-201ENST00000439613 SPDYE16A6NNV3 312 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P37-201ENST00000439613 RAPGEF3O95398 923 aa5.63□□□□□ -1.51
HMGB1P37-201ENST00000439613 L3MBTL2Q969R5 705 aa5.63□□□□□ -1.51
HMGB1P37-201ENST00000439613 CCDC144AA2RUR9 1427 aa5.63□□□□□ -1.51
HMGB1P37-201ENST00000439613 VWDEQ8N2E2 1590 aa5.63□□□□□ -1.51
HMGB1P37-201ENST00000439613 EVI5O60447 810 aa5.62□□□□□ -1.51
HMGB1P37-201ENST00000439613 ARSIQ5FYB1 569 aa5.62□□□□□ -1.51
HMGB1P37-201ENST00000439613 GPR153Q6NV75 609 aa5.62□□□□□ -1.51
HMGB1P37-201ENST00000439613 STAC3Q96MF2 364 aa5.62□□□□□ -1.51
HMGB1P37-201ENST00000439613 LMTK2Q8IWU2 1503 aa5.62□□□□□ -1.51
HMGB1P37-201ENST00000439613 DIP2CQ9Y2E4 1556 aa5.62□□□□□ -1.51
HMGB1P37-201ENST00000439613 E9PCH4 1651 aa5.62□□□□□ -1.51
HMGB1P37-201ENST00000439613 MLLT3P42568 568 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P37-201ENST00000439613 PDIA6Q15084 440 aa5.61□□□□□ -1.51
HMGB1P37-201ENST00000439613 SPHKAPQ2M3C7 1700 aa5.61□□□□□ -1.51
HMGB1P37-201ENST00000439613 TPRNQ4KMQ1 711 aa5.61□□□□□ -1.51
HMGB1P37-201ENST00000439613 FRMPD1Q5SYB0 1578 aa5.61□□□□□ -1.51
HMGB1P37-201ENST00000439613 DIEXFQ68CQ4 756 aaKnown RBP5.61□□□□□ -1.51
HMGB1P37-201ENST00000439613 MROH1Q8NDA8 1641 aa5.61□□□□□ -1.51
HMGB1P37-201ENST00000439613 ANO8Q9HCE9 1232 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P37-201ENST00000439613 REREQ9P2R6 1566 aa5.61□□□□□ -1.51
HMGB1P37-201ENST00000439613 ZC3H13Q5T200 1668 aaKnown RBP5.6□□□□□ -1.51
HMGB1P37-201ENST00000439613 PLA2R1Q13018 1463 aa5.6□□□□□ -1.51
HMGB1P37-201ENST00000439613 PTPRTO14522 1441 aa5.6□□□□□ -1.51
HMGB1P37-201ENST00000439613 WASHC2CQ9Y4E1 1318 aa5.6□□□□□ -1.51
HMGB1P37-201ENST00000439613 KHSRPQ92945 711 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB1P37-201ENST00000439613 TRPM2O94759 1503 aa5.59□□□□□ -1.51
HMGB1P37-201ENST00000439613 AGLP35573 1532 aa5.59□□□□□ -1.51
HMGB1P37-201ENST00000439613 EFCAB6Q5THR3 1501 aa5.59□□□□□ -1.51
HMGB1P37-201ENST00000439613 UHRF1BP1Q6BDS2 1440 aa5.59□□□□□ -1.51
HMGB1P37-201ENST00000439613 NUDT7P0C024 238 aa5.59□□□□□ -1.51
HMGB1P37-201ENST00000439613 HOXB1P14653 301 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P37-201ENST00000439613 GGT6Q6P531 493 aa5.59□□□□□ -1.51
HMGB1P37-201ENST00000439613 FAM163AQ96GL9 167 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P37-201ENST00000439613 CEP152O94986 1710 aa5.59□□□□□ -1.51
HMGB1P37-201ENST00000439613 NEURL4Q96JN8 1562 aa5.59□□□□□ -1.52
HMGB1P37-201ENST00000439613 YEATS2Q9ULM3 1422 aa5.58□□□□□ -1.52
HMGB1P37-201ENST00000439613 KIF1BO60333 1816 aa5.58□□□□□ -1.52
HMGB1P37-201ENST00000439613 KDM4FA0A1W2PPD8 638 aa5.58□□□□□ -1.52
HMGB1P37-201ENST00000439613 TESPA1A2RU30 521 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P37-201ENST00000439613 ST18O60284 1047 aa5.58□□□□□ -1.52
HMGB1P37-201ENST00000439613 PTGER2P43116 358 aa5.58□□□□□ -1.52
HMGB1P37-201ENST00000439613 EIF4G2P78344 907 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB1P37-201ENST00000439613 SMYD5Q6GMV2 418 aa5.58□□□□□ -1.52
HMGB1P37-201ENST00000439613 DCAF11Q8TEB1 546 aa5.58□□□□□ -1.52
HMGB1P37-201ENST00000439613 CFAP65Q6ZU64 1925 aaKnown RBP5.58□□□□□ -1.52
HMGB1P37-201ENST00000439613 ABCC3O15438 1527 aa5.58□□□□□ -1.52
HMGB1P37-201ENST00000439613 ARHGAP31Q2M1Z3 1444 aa5.57□□□□□ -1.52
HMGB1P37-201ENST00000439613 CNTLNQ9NXG0 1405 aa5.57□□□□□ -1.52
HMGB1P37-201ENST00000439613 CAMSAP1Q5T5Y3 1602 aa5.57□□□□□ -1.52
HMGB1P37-201ENST00000439613 GRXCR2A6NFK2 248 aa5.57□□□□□ -1.52
HMGB1P37-201ENST00000439613 LMOD2Q6P5Q4 547 aa5.57□□□□□ -1.52
HMGB1P37-201ENST00000439613 ARHGEF40Q8TER5 1519 aa5.57□□□□□ -1.52
HMGB1P37-201ENST00000439613 SPATA31E1Q6ZUB1 1445 aa5.57□□□□□ -1.52
HMGB1P37-201ENST00000439613 NBPF8Q3BBV2 869 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms