RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 WAPLQ7Z5K2 1190 aa23.9■■□□□ 1.42
TOM1-207ENST00000439512 C1orf167Q5SNV9 1468 aa23.89■■□□□ 1.42
TOM1-207ENST00000439512 BRINP3Q76B58 766 aa23.88■■□□□ 1.41
TOM1-207ENST00000439512 PCGF6Q9BYE7 350 aa23.88■■□□□ 1.41
TOM1-207ENST00000439512 SIRT1Q96EB6 747 aa23.87■■□□□ 1.41
TOM1-207ENST00000439512 FMN2Q9NZ56 1722 aa23.87■■□□□ 1.41
TOM1-207ENST00000439512 ARHGEF28Q8N1W1 1705 aaKnown RBP23.85■■□□□ 1.41
TOM1-207ENST00000439512 L3MBTL2Q969R5 705 aa23.85■■□□□ 1.41
TOM1-207ENST00000439512 ADGRB2O60241 1585 aa23.84■■□□□ 1.41
TOM1-207ENST00000439512 SHPRHQ149N8 1683 aa23.82■■□□□ 1.4
TOM1-207ENST00000439512 DISP3Q9P2K9 1392 aa23.81■■□□□ 1.4
TOM1-207ENST00000439512 TRAK1Q9UPV9 953 aa23.81■■□□□ 1.4
TOM1-207ENST00000439512 SAFB2Q14151 953 aaKnown RBP eCLIP23.79■■□□□ 1.4
TOM1-207ENST00000439512 PRAM1Q96QH2 718 aa23.79■■□□□ 1.4
TOM1-207ENST00000439512 POGKQ9P215 609 aa23.79■■□□□ 1.4
TOM1-207ENST00000439512 TRPM1Q7Z4N2 1603 aa23.77■■□□□ 1.4
TOM1-207ENST00000439512 USP32Q8NFA0 1604 aa23.77■■□□□ 1.4
TOM1-207ENST00000439512 JCADQ9P266 1359 aa23.77■■□□□ 1.4
TOM1-207ENST00000439512 NBPF1Q3BBV0 1214 aa23.75■■□□□ 1.39
TOM1-207ENST00000439512 ORAI2Q96SN7 254 aa23.75■■□□□ 1.39
TOM1-207ENST00000439512 RGPD8O14715 1765 aaPredicted RBP23.74■■□□□ 1.39
TOM1-207ENST00000439512 NUTM2FA1L443 756 aa23.73■■□□□ 1.39
TOM1-207ENST00000439512 DDX17Q92841 729 aaKnown RBP23.72■■□□□ 1.39
TOM1-207ENST00000439512 LRP6O75581 1613 aa23.72■■□□□ 1.39
TOM1-207ENST00000439512 KIF1AQ12756 1690 aa23.72■■□□□ 1.39
TOM1-207ENST00000439512 PXDNQ92626 1479 aa23.7■■□□□ 1.38
TOM1-207ENST00000439512 ESCO1Q5FWF5 840 aa23.69■■□□□ 1.38
TOM1-207ENST00000439512 SOS2Q07890 1332 aaPredicted RBP23.68■■□□□ 1.38
TOM1-207ENST00000439512 HIRIP3Q9BW71 556 aaPredicted RBP23.67■■□□□ 1.38
TOM1-207ENST00000439512 ANKARQ7Z5J8 1434 aa23.67■■□□□ 1.38
TOM1-207ENST00000439512 TONSLQ96HA7 1378 aa23.66■■□□□ 1.38
TOM1-207ENST00000439512 MINK1Q8N4C8 1332 aaPredicted RBP23.66■■□□□ 1.38
TOM1-207ENST00000439512 TULP4Q9NRJ4 1543 aa23.66■■□□□ 1.38
TOM1-207ENST00000439512 ILDR2Q71H61 639 aa23.66■■□□□ 1.38
TOM1-207ENST00000439512 COL22A1Q8NFW1 1626 aaPredicted RBP23.66■■□□□ 1.38
TOM1-207ENST00000439512 PNPLA6Q8IY17 1366 aa23.65■■□□□ 1.38
TOM1-207ENST00000439512 SPATA31A6Q5VVP1 1343 aa23.64■■□□□ 1.38
TOM1-207ENST00000439512 NBPF8Q3BBV2 869 aa23.64■■□□□ 1.37
TOM1-207ENST00000439512 RGS17Q9UGC6 210 aaPredicted RBP23.62■■□□□ 1.37
TOM1-207ENST00000439512 QRICH2Q9H0J4 1663 aa23.61■■□□□ 1.37
TOM1-207ENST00000439512 LRRC59Q96AG4 307 aaKnown RBP23.61■■□□□ 1.37
TOM1-207ENST00000439512 GPRASP1Q5JY77 1395 aa23.61■■□□□ 1.37
TOM1-207ENST00000439512 ATP7BP35670 1465 aa23.61■■□□□ 1.37
TOM1-207ENST00000439512 TOPAZ1Q8N9V7 1692 aa23.6■■□□□ 1.37
TOM1-207ENST00000439512 PRR36Q9H6K5 1346 aa23.6■■□□□ 1.37
TOM1-207ENST00000439512 FOXO3O43524 673 aa23.6■■□□□ 1.37
TOM1-207ENST00000439512 NPHP3Q7Z494 1330 aa23.59■■□□□ 1.37
TOM1-207ENST00000439512 WASLO00401 505 aaPredicted RBP23.58■■□□□ 1.37
TOM1-207ENST00000439512 RALGAPBQ86X10 1494 aa23.57■■□□□ 1.36
TOM1-207ENST00000439512 ITSN1Q15811 1721 aa23.57■■□□□ 1.36
TOM1-207ENST00000439512 TRPM3Q9HCF6 1732 aaPredicted RBP23.56■■□□□ 1.36
TOM1-207ENST00000439512 ROCK2O75116 1388 aaKnown RBP23.56■■□□□ 1.36
TOM1-207ENST00000439512 EIF3AQ14152 1382 aaKnown RBP23.56■■□□□ 1.36
TOM1-207ENST00000439512 XPCQ01831 940 aaPredicted RBP23.56■■□□□ 1.36
TOM1-207ENST00000439512 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
TOM1-207ENST00000439512 PHF8Q9UPP1 1060 aa23.55■■□□□ 1.36
TOM1-207ENST00000439512 CCER1Q8TC90 406 aaPredicted RBP23.53■■□□□ 1.36
TOM1-207ENST00000439512 CDK19Q9BWU1 502 aa23.53■■□□□ 1.36
TOM1-207ENST00000439512 CENPJQ9HC77 1338 aaPredicted RBP23.53■■□□□ 1.36
TOM1-207ENST00000439512 NUTM2BA6NNL0 878 aaPredicted RBP23.52■■□□□ 1.36
TOM1-207ENST00000439512 NUTM2EB1AL46 878 aaPredicted RBP23.52■■□□□ 1.36
TOM1-207ENST00000439512 NUTM2AQ8IVF1 878 aaPredicted RBP23.52■■□□□ 1.36
TOM1-207ENST00000439512 PMFBP1Q8TBY8 1022 aa23.52■■□□□ 1.36
TOM1-207ENST00000439512 CLSPNQ9HAW4 1339 aa23.51■■□□□ 1.35
TOM1-207ENST00000439512 KRT28Q7Z3Y7 464 aa23.5■■□□□ 1.35
TOM1-207ENST00000439512 ALS2Q96Q42 1657 aa23.5■■□□□ 1.35
TOM1-207ENST00000439512 ABCA3Q99758 1704 aa23.5■■□□□ 1.35
TOM1-207ENST00000439512 NUDT16Q96DE0 195 aaKnown RBP23.49■■□□□ 1.35
TOM1-207ENST00000439512 CARD11Q9BXL7 1154 aa23.49■■□□□ 1.35
TOM1-207ENST00000439512 MARF1Q9Y4F3 1742 aaKnown RBP23.48■■□□□ 1.35
TOM1-207ENST00000439512 PSME1Q06323 249 aa23.48■■□□□ 1.35
TOM1-207ENST00000439512 SPATA31A3Q5VYP0 1347 aa23.48■■□□□ 1.35
TOM1-207ENST00000439512 TNS3Q68CZ2 1445 aa23.48■■□□□ 1.35
TOM1-207ENST00000439512 MEX3CQ5U5Q3 659 aaKnown RBP23.47■■□□□ 1.35
TOM1-207ENST00000439512 SBNO1A3KN83 1393 aa23.47■■□□□ 1.35
TOM1-207ENST00000439512 CRYBG1Q9Y4K1 1723 aa23.45■■□□□ 1.34
TOM1-207ENST00000439512 POTEAQ6S8J7 498 aa23.45■■□□□ 1.34
TOM1-207ENST00000439512 SRPK2P78362 688 aaKnown RBP23.44■■□□□ 1.34
TOM1-207ENST00000439512 TIMELESSQ9UNS1 1208 aa23.44■■□□□ 1.34
TOM1-207ENST00000439512 NGDNQ8NEJ9 315 aaKnown RBP23.43■■□□□ 1.34
TOM1-207ENST00000439512 POLR3AO14802 1390 aaPredicted RBP23.42■■□□□ 1.34
TOM1-207ENST00000439512 SBNO2Q9Y2G9 1366 aa23.42■■□□□ 1.34
TOM1-207ENST00000439512 CABP2Q9NPB3 220 aa23.42■■□□□ 1.34
TOM1-207ENST00000439512 CCDC61Q9Y6R9 512 aa23.42■■□□□ 1.34
TOM1-207ENST00000439512 ADAMTS2O95450 1211 aa23.39■■□□□ 1.33
TOM1-207ENST00000439512 LMOD2Q6P5Q4 547 aa23.39■■□□□ 1.33
TOM1-207ENST00000439512 EVC2Q86UK5 1308 aa23.38■■□□□ 1.33
TOM1-207ENST00000439512 PLEKHG3A1L390 1219 aa23.37■■□□□ 1.33
TOM1-207ENST00000439512 ARHGEF10O15013 1369 aa23.37■■□□□ 1.33
TOM1-207ENST00000439512 AFF2P51816 1311 aa23.36■■□□□ 1.33
TOM1-207ENST00000439512 PPIP5K1Q6PFW1 1433 aa23.36■■□□□ 1.33
TOM1-207ENST00000439512 PLEKHG5O94827 1062 aa23.36■■□□□ 1.33
TOM1-207ENST00000439512 SOCS7O14512 581 aa23.35■■□□□ 1.33
TOM1-207ENST00000439512 C8orf37Q96NL8 207 aa23.35■■□□□ 1.33
TOM1-207ENST00000439512 PAK3O75914 559 aaPredicted RBP23.34■■□□□ 1.33
TOM1-207ENST00000439512 ACEP12821 1306 aa23.33■■□□□ 1.33
TOM1-207ENST00000439512 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.33■■□□□ 1.33
TOM1-207ENST00000439512 ZNF772Q68DY9 489 aaPredicted RBP23.33■■□□□ 1.33
TOM1-207ENST00000439512 PHRF1Q9P1Y6 1649 aaKnown RBP23.33■■□□□ 1.32
TOM1-207ENST00000439512 NGLY1Q96IV0 654 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms