RNA–Protein interactions for RNA: ENST00000439368.6

ARHGEF4-208, Transcript of Rho guanine nucleotide exchange factor 4, human

TSL 5

Gene ARHGEF4, Length 901 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF4-208	ENST00000439368	ORAI2	Q96SN7	254 aa		32.55	■■■□□ 2.8
ARHGEF4-208	ENST00000439368	CDC42BPG	Q6DT37	1551 aa		32.53	■■■□□ 2.8
ARHGEF4-208	ENST00000439368	SIRT1	Q96EB6	747 aa		32.53	■■■□□ 2.8
ARHGEF4-208	ENST00000439368	STAC3	Q96MF2	364 aa		32.53	■■■□□ 2.8
ARHGEF4-208	ENST00000439368	RGS17	Q9UGC6	210 aa	Predicted RBP	32.5	■■■□□ 2.79
ARHGEF4-208	ENST00000439368	SPATA31A6	Q5VVP1	1343 aa		32.5	■■■□□ 2.79
ARHGEF4-208	ENST00000439368	SOCS7	O14512	581 aa		32.49	■■■□□ 2.79
ARHGEF4-208	ENST00000439368	SHPRH	Q149N8	1683 aa		32.49	■■■□□ 2.79
ARHGEF4-208	ENST00000439368	NUTM2F	A1L443	756 aa		32.48	■■■□□ 2.79
ARHGEF4-208	ENST00000439368	ADGRB1	O14514	1584 aa		32.47	■■■□□ 2.79
ARHGEF4-208	ENST00000439368	ESCO1	Q5FWF5	840 aa		32.47	■■■□□ 2.79
ARHGEF4-208	ENST00000439368	LRRC59	Q96AG4	307 aa	Known RBP	32.47	■■■□□ 2.79
ARHGEF4-208	ENST00000439368	PRAM1	Q96QH2	718 aa		32.47	■■■□□ 2.79
ARHGEF4-208	ENST00000439368	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.46	■■■□□ 2.79
ARHGEF4-208	ENST00000439368	TRAK1	Q9UPV9	953 aa		32.44	■■■□□ 2.78
ARHGEF4-208	ENST00000439368	LRP6	O75581	1613 aa		32.44	■■■□□ 2.78
ARHGEF4-208	ENST00000439368	POGK	Q9P215	609 aa		32.43	■■■□□ 2.78
ARHGEF4-208	ENST00000439368	DLC1	Q96QB1	1528 aa		32.41	■■■□□ 2.78
ARHGEF4-208	ENST00000439368	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.41	■■■□□ 2.78
ARHGEF4-208	ENST00000439368	NUTM2E	B1AL46	878 aa	Predicted RBP	32.41	■■■□□ 2.78
ARHGEF4-208	ENST00000439368	MEX3C	Q5U5Q3	659 aa	Known RBP	32.41	■■■□□ 2.78
ARHGEF4-208	ENST00000439368	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.41	■■■□□ 2.78
ARHGEF4-208	ENST00000439368	FMN2	Q9NZ56	1722 aa		32.4	■■■□□ 2.78
ARHGEF4-208	ENST00000439368	SOS2	Q07890	1332 aa	Predicted RBP	32.38	■■■□□ 2.77
ARHGEF4-208	ENST00000439368	PNPLA6	Q8IY17	1366 aa		32.36	■■■□□ 2.77
ARHGEF4-208	ENST00000439368	NPHP3	Q7Z494	1330 aa		32.35	■■■□□ 2.77
ARHGEF4-208	ENST00000439368	POTEA	Q6S8J7	498 aa		32.35	■■■□□ 2.77
ARHGEF4-208	ENST00000439368	SIN3A	Q96ST3	1273 aa		32.35	■■■□□ 2.77
ARHGEF4-208	ENST00000439368	FOXO3	O43524	673 aa		32.34	■■■□□ 2.77
ARHGEF4-208	ENST00000439368	TRIM26	Q12899	539 aa	Predicted RBP	32.34	■■■□□ 2.77
ARHGEF4-208	ENST00000439368	XPC	Q01831	940 aa	Predicted RBP	32.31	■■■□□ 2.76
ARHGEF4-208	ENST00000439368	NEUROD1	Q13562	356 aa		32.3	■■■□□ 2.76
ARHGEF4-208	ENST00000439368	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.3	■■■□□ 2.76
ARHGEF4-208	ENST00000439368	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.29	■■■□□ 2.76
ARHGEF4-208	ENST00000439368	RGPD8	O14715	1765 aa	Predicted RBP	32.28	■■■□□ 2.76
ARHGEF4-208	ENST00000439368	L3MBTL2	Q969R5	705 aa		32.27	■■■□□ 2.76
ARHGEF4-208	ENST00000439368	PXDN	Q92626	1479 aa		32.27	■■■□□ 2.76
ARHGEF4-208	ENST00000439368	KIAA1210	Q9ULL0	1709 aa		32.26	■■■□□ 2.75
ARHGEF4-208	ENST00000439368	ADGRB2	O60241	1585 aa		32.25	■■■□□ 2.75
ARHGEF4-208	ENST00000439368	KIF1A	Q12756	1690 aa		32.24	■■■□□ 2.75
ARHGEF4-208	ENST00000439368	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.24	■■■□□ 2.75
ARHGEF4-208	ENST00000439368	NBPF1	Q3BBV0	1214 aa		32.24	■■■□□ 2.75
ARHGEF4-208	ENST00000439368	PHF8	Q9UPP1	1060 aa		32.24	■■■□□ 2.75
ARHGEF4-208	ENST00000439368	ZNF772	Q68DY9	489 aa	Predicted RBP	32.22	■■■□□ 2.75
ARHGEF4-208	ENST00000439368	ADAMTS2	O95450	1211 aa		32.2	■■■□□ 2.75
ARHGEF4-208	ENST00000439368	KRT28	Q7Z3Y7	464 aa		32.19	■■■□□ 2.74
ARHGEF4-208	ENST00000439368	C8orf37	Q96NL8	207 aa		32.19	■■■□□ 2.74
ARHGEF4-208	ENST00000439368	USP32	Q8NFA0	1604 aa		32.18	■■■□□ 2.74
ARHGEF4-208	ENST00000439368	ANKAR	Q7Z5J8	1434 aa		32.18	■■■□□ 2.74
ARHGEF4-208	ENST00000439368	WASL	O00401	505 aa	Predicted RBP	32.18	■■■□□ 2.74
ARHGEF4-208	ENST00000439368	AFF2	P51816	1311 aa		32.18	■■■□□ 2.74
ARHGEF4-208	ENST00000439368	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.16	■■■□□ 2.74
ARHGEF4-208	ENST00000439368	PMFBP1	Q8TBY8	1022 aa		32.16	■■■□□ 2.74
ARHGEF4-208	ENST00000439368	EIF3A	Q14152	1382 aa	Known RBP	32.15	■■■□□ 2.74
ARHGEF4-208	ENST00000439368	SPATA31A3	Q5VYP0	1347 aa		32.13	■■■□□ 2.73
ARHGEF4-208	ENST00000439368	PRR36	Q9H6K5	1346 aa		32.13	■■■□□ 2.73
ARHGEF4-208	ENST00000439368	TULP4	Q9NRJ4	1543 aa		32.12	■■■□□ 2.73
ARHGEF4-208	ENST00000439368	PSME1	Q06323	249 aa		32.12	■■■□□ 2.73
ARHGEF4-208	ENST00000439368	NGLY1	Q96IV0	654 aa		32.11	■■■□□ 2.73
ARHGEF4-208	ENST00000439368	CDK19	Q9BWU1	502 aa		32.06	■■■□□ 2.72
ARHGEF4-208	ENST00000439368	TNS3	Q68CZ2	1445 aa		32.05	■■■□□ 2.72
ARHGEF4-208	ENST00000439368	TRPM1	Q7Z4N2	1603 aa		32.04	■■■□□ 2.72
ARHGEF4-208	ENST00000439368	RXRB	P28702	533 aa		32.04	■■■□□ 2.72
ARHGEF4-208	ENST00000439368	LMOD2	Q6P5Q4	547 aa		32.04	■■■□□ 2.72
ARHGEF4-208	ENST00000439368	NUDT16	Q96DE0	195 aa	Known RBP	32.04	■■■□□ 2.72
ARHGEF4-208	ENST00000439368	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.03	■■■□□ 2.72
ARHGEF4-208	ENST00000439368	SBNO1	A3KN83	1393 aa		32.03	■■■□□ 2.72
ARHGEF4-208	ENST00000439368	QTRT2	Q9H974	415 aa	Known RBP	32.02	■■■□□ 2.72
ARHGEF4-208	ENST00000439368	PLEKHG5	O94827	1062 aa		32.01	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	NGDN	Q8NEJ9	315 aa	Known RBP	32.01	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	ATP7B	P35670	1465 aa		32.01	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	GPRASP1	Q5JY77	1395 aa		32	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	ROCK2	O75116	1388 aa	Known RBP	31.99	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	NBPF8	Q3BBV2	869 aa		31.99	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	USP21	Q9UK80	565 aa		31.99	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	ITSN1	Q15811	1721 aa		31.97	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	MARF1	Q9Y4F3	1742 aa	Known RBP	31.97	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	TONSL	Q96HA7	1378 aa		31.97	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	HAP1	P54257	671 aa	Predicted RBP	31.97	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.97	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	CABLES1	Q8TDN4	633 aa		31.97	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	ARHGEF10	O15013	1369 aa		31.96	■■■□□ 2.71
ARHGEF4-208	ENST00000439368	QRICH2	Q9H0J4	1663 aa		31.95	■■■□□ 2.7
ARHGEF4-208	ENST00000439368	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.95	■■■□□ 2.7
ARHGEF4-208	ENST00000439368	SRPK2	P78362	688 aa	Known RBP	31.93	■■■□□ 2.7
ARHGEF4-208	ENST00000439368	RBM6	P78332	1123 aa	Known RBP	31.92	■■■□□ 2.7
ARHGEF4-208	ENST00000439368	CCDC61	Q9Y6R9	512 aa		31.92	■■■□□ 2.7
ARHGEF4-208	ENST00000439368	PAK3	O75914	559 aa	Predicted RBP	31.91	■■■□□ 2.7
ARHGEF4-208	ENST00000439368	CABP2	Q9NPB3	220 aa		31.9	■■■□□ 2.7
ARHGEF4-208	ENST00000439368	TRPC5	Q9UL62	973 aa	Predicted RBP	31.9	■■■□□ 2.7
ARHGEF4-208	ENST00000439368	TOPAZ1	Q8N9V7	1692 aa		31.89	■■■□□ 2.7
ARHGEF4-208	ENST00000439368	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.88	■■■□□ 2.69
ARHGEF4-208	ENST00000439368	ALS2	Q96Q42	1657 aa		31.87	■■■□□ 2.69
ARHGEF4-208	ENST00000439368	ACE	P12821	1306 aa		31.87	■■■□□ 2.69
ARHGEF4-208	ENST00000439368	BCL9L	Q86UU0	1499 aa		31.86	■■■□□ 2.69
ARHGEF4-208	ENST00000439368	ABCA3	Q99758	1704 aa		31.86	■■■□□ 2.69
ARHGEF4-208	ENST00000439368	PLEKHG3	A1L390	1219 aa		31.85	■■■□□ 2.69
ARHGEF4-208	ENST00000439368	ATRN	O75882	1429 aa		31.84	■■■□□ 2.69
ARHGEF4-208	ENST00000439368	POLR3A	O14802	1390 aa	Predicted RBP	31.83	■■■□□ 2.69
ARHGEF4-208	ENST00000439368	CARD11	Q9BXL7	1154 aa		31.82	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms