RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 SLC24A3Q9HC58 644 aa13.94□□□□□ -0.18
LSMEM1-202ENST00000439068 WASHC2CQ9Y4E1 1318 aa13.93□□□□□ -0.18
LSMEM1-202ENST00000439068 KIF3BO15066 747 aa13.93□□□□□ -0.18
LSMEM1-202ENST00000439068 TCOF1Q13428 1488 aaKnown RBP13.93□□□□□ -0.18
LSMEM1-202ENST00000439068 MAP3K9P80192 1104 aa13.92□□□□□ -0.18
LSMEM1-202ENST00000439068 DHX29Q7Z478 1369 aaKnown RBP13.92□□□□□ -0.18
LSMEM1-202ENST00000439068 HSPA1LP34931 641 aa13.91□□□□□ -0.18
LSMEM1-202ENST00000439068 SP7Q8TDD2 431 aaPredicted RBP13.91□□□□□ -0.18
LSMEM1-202ENST00000439068 A2ML1A8K2U0 1454 aa13.91□□□□□ -0.18
LSMEM1-202ENST00000439068 CEP170BQ9Y4F5 1589 aaPredicted RBP13.91□□□□□ -0.18
LSMEM1-202ENST00000439068 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
LSMEM1-202ENST00000439068 ZNF644Q9H582 1327 aaPredicted RBP13.9□□□□□ -0.18
LSMEM1-202ENST00000439068 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.18
LSMEM1-202ENST00000439068 ZMYND10O75800 440 aa13.9□□□□□ -0.18
LSMEM1-202ENST00000439068 TSPY4P0CV99 314 aa13.9□□□□□ -0.18
LSMEM1-202ENST00000439068 TSPY10P0CW01 314 aa13.9□□□□□ -0.18
LSMEM1-202ENST00000439068 TNRQ92752 1358 aa13.9□□□□□ -0.18
LSMEM1-202ENST00000439068 FBXO31Q5XUX0 539 aaPredicted RBP13.89□□□□□ -0.19
LSMEM1-202ENST00000439068 OXER1Q8TDS5 423 aa13.89□□□□□ -0.19
LSMEM1-202ENST00000439068 PLXNC1O60486 1568 aa13.88□□□□□ -0.19
LSMEM1-202ENST00000439068 MYO3AQ8NEV4 1616 aa13.87□□□□□ -0.19
LSMEM1-202ENST00000439068 GRXCR2A6NFK2 248 aa13.87□□□□□ -0.19
LSMEM1-202ENST00000439068 CPS1P31327 1500 aa13.86□□□□□ -0.19
LSMEM1-202ENST00000439068 ZNF142P52746 1687 aaPredicted RBP13.86□□□□□ -0.19
LSMEM1-202ENST00000439068 C3orf67Q6ZVT6 689 aa13.86□□□□□ -0.19
LSMEM1-202ENST00000439068 GPIHBP1Q8IV16 184 aa13.86□□□□□ -0.19
LSMEM1-202ENST00000439068 INO80Q9ULG1 1556 aaPredicted RBP13.86□□□□□ -0.19
LSMEM1-202ENST00000439068 SHANK2Q9UPX8 1470 aa13.86□□□□□ -0.19
LSMEM1-202ENST00000439068 BARGINQ6ZT62 677 aa13.85□□□□□ -0.19
LSMEM1-202ENST00000439068 ADGBQ8N7X0 1667 aa13.85□□□□□ -0.19
LSMEM1-202ENST00000439068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.84□□□□□ -0.19
LSMEM1-202ENST00000439068 MIA2Q96PC5 1412 aa13.84□□□□□ -0.19
LSMEM1-202ENST00000439068 BRPF1P55201 1214 aaPredicted RBP13.84□□□□□ -0.19
LSMEM1-202ENST00000439068 DNMT1P26358 1616 aaKnown RBP13.83□□□□□ -0.2
LSMEM1-202ENST00000439068 MBD5Q9P267 1494 aa13.83□□□□□ -0.2
LSMEM1-202ENST00000439068 FAM135AQ9P2D6 1515 aa13.82□□□□□ -0.2
LSMEM1-202ENST00000439068 PZPP20742 1482 aa13.81□□□□□ -0.2
LSMEM1-202ENST00000439068 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
LSMEM1-202ENST00000439068 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
LSMEM1-202ENST00000439068 DDX12PQ92771 950 aa13.8□□□□□ -0.2
LSMEM1-202ENST00000439068 NPHP4O75161 1426 aaPredicted RBP13.8□□□□□ -0.2
LSMEM1-202ENST00000439068 CCDC141Q6ZP82 1450 aa13.79□□□□□ -0.2
LSMEM1-202ENST00000439068 KDM5DQ9BY66 1539 aa13.79□□□□□ -0.2
LSMEM1-202ENST00000439068 UGGT1Q9NYU2 1555 aa13.78□□□□□ -0.2
LSMEM1-202ENST00000439068 EVI5O60447 810 aa13.77□□□□□ -0.21
LSMEM1-202ENST00000439068 OSBPP22059 807 aa13.77□□□□□ -0.21
LSMEM1-202ENST00000439068 NEUROD2Q15784 382 aa13.77□□□□□ -0.21
LSMEM1-202ENST00000439068 EHBP1L1Q8N3D4 1523 aa13.77□□□□□ -0.21
LSMEM1-202ENST00000439068 MED1Q15648 1581 aaPredicted RBP13.76□□□□□ -0.21
LSMEM1-202ENST00000439068 MED14O60244 1454 aa13.76□□□□□ -0.21
LSMEM1-202ENST00000439068 KRI1Q8N9T8 703 aaKnown RBP13.76□□□□□ -0.21
LSMEM1-202ENST00000439068 TIAM1Q13009 1591 aa13.75□□□□□ -0.21
LSMEM1-202ENST00000439068 GPR37O15354 613 aa13.75□□□□□ -0.21
LSMEM1-202ENST00000439068 TBC1D12O60347 775 aa13.75□□□□□ -0.21
LSMEM1-202ENST00000439068 PRIM1P49642 420 aaKnown RBP13.75□□□□□ -0.21
LSMEM1-202ENST00000439068 EID1Q9Y6B2 187 aa13.75□□□□□ -0.21
LSMEM1-202ENST00000439068 NUTM2FA1L443 756 aa13.74□□□□□ -0.21
LSMEM1-202ENST00000439068 PTCD2Q8WV60 388 aaKnown RBP13.74□□□□□ -0.21
LSMEM1-202ENST00000439068 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.74□□□□□ -0.21
LSMEM1-202ENST00000439068 POLR1AO95602 1720 aaPredicted RBP13.73□□□□□ -0.21
LSMEM1-202ENST00000439068 PTGER2P43116 358 aa13.73□□□□□ -0.21
LSMEM1-202ENST00000439068 TXNDC2Q86VQ3 553 aa13.73□□□□□ -0.21
LSMEM1-202ENST00000439068 NEURL4Q96JN8 1562 aa13.73□□□□□ -0.21
LSMEM1-202ENST00000439068 CAMSAP2Q08AD1 1489 aa13.73□□□□□ -0.21
LSMEM1-202ENST00000439068 NCOA2Q15596 1464 aa13.72□□□□□ -0.21
LSMEM1-202ENST00000439068 DEPDC5O75140 1603 aa13.72□□□□□ -0.21
LSMEM1-202ENST00000439068 TMEM132AQ24JP5 1023 aa13.71□□□□□ -0.21
LSMEM1-202ENST00000439068 VWDEQ8N2E2 1590 aa13.71□□□□□ -0.22
LSMEM1-202ENST00000439068 POTEJP0CG39 1038 aa13.7□□□□□ -0.22
LSMEM1-202ENST00000439068 AK7Q96M32 723 aa13.7□□□□□ -0.22
LSMEM1-202ENST00000439068 LRRC7Q96NW7 1537 aa13.69□□□□□ -0.22
LSMEM1-202ENST00000439068 SLC34A2O95436 690 aa13.68□□□□□ -0.22
LSMEM1-202ENST00000439068 ARHGEF5Q12774 1597 aa13.66□□□□□ -0.22
LSMEM1-202ENST00000439068 IQGAP1P46940 1657 aa13.66□□□□□ -0.22
LSMEM1-202ENST00000439068 LTKP29376 864 aa13.66□□□□□ -0.22
LSMEM1-202ENST00000439068 ANO8Q9HCE9 1232 aaPredicted RBP13.66□□□□□ -0.22
LSMEM1-202ENST00000439068 POTEB2H3BUK9 544 aa13.65□□□□□ -0.22
LSMEM1-202ENST00000439068 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
LSMEM1-202ENST00000439068 SCAF11Q99590 1463 aaKnown RBP13.65□□□□□ -0.22
LSMEM1-202ENST00000439068 GPBP1L1Q9HC44 474 aaPredicted RBP13.64□□□□□ -0.23
LSMEM1-202ENST00000439068 PCDHGA4Q9Y5G9 962 aa13.64□□□□□ -0.23
LSMEM1-202ENST00000439068 GTF3C3Q9Y5Q9 886 aa13.64□□□□□ -0.23
LSMEM1-202ENST00000439068 ABCC3O15438 1527 aa13.64□□□□□ -0.23
LSMEM1-202ENST00000439068 KANK1Q14678 1352 aa13.63□□□□□ -0.23
LSMEM1-202ENST00000439068 TRIM66O15016 1216 aa13.63□□□□□ -0.23
LSMEM1-202ENST00000439068 PROSER2Q86WR7 435 aaPredicted RBP13.63□□□□□ -0.23
LSMEM1-202ENST00000439068 MYOM3Q5VTT5 1437 aa13.63□□□□□ -0.23
LSMEM1-202ENST00000439068 KCNA6P17658 529 aa13.62□□□□□ -0.23
LSMEM1-202ENST00000439068 FECHP22830 423 aa13.62□□□□□ -0.23
LSMEM1-202ENST00000439068 RRP7BPQ9NSQ0 103 aa13.62□□□□□ -0.23
LSMEM1-202ENST00000439068 FAM135BQ49AJ0 1406 aa13.62□□□□□ -0.23
LSMEM1-202ENST00000439068 RNF17Q9BXT8 1623 aaKnown RBP13.61□□□□□ -0.23
LSMEM1-202ENST00000439068 RGS17Q9UGC6 210 aaPredicted RBP13.61□□□□□ -0.23
LSMEM1-202ENST00000439068 SYNMO15061 1565 aa13.61□□□□□ -0.23
LSMEM1-202ENST00000439068 ZC3H13Q5T200 1668 aaKnown RBP13.6□□□□□ -0.23
LSMEM1-202ENST00000439068 HDGFP51858 240 aaKnown RBP13.6□□□□□ -0.23
LSMEM1-202ENST00000439068 ARHGAP31Q2M1Z3 1444 aa13.6□□□□□ -0.23
LSMEM1-202ENST00000439068 ALKQ9UM73 1620 aa13.6□□□□□ -0.23
LSMEM1-202ENST00000439068 LRRC9Q6ZRR7 1453 aa13.6□□□□□ -0.23
LSMEM1-202ENST00000439068 ZNF316A6NFI3 1004 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms