RNA–Protein interactions for RNA: ENST00000437863.2

PTPN20-210, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5

Gene PTPN20, Length 3,125 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-210ENST00000437863 ANP32BQ92688 251 aaKnown RBP9.47□□□□□ -0.89
PTPN20-210ENST00000437863 L3MBTL2Q969R5 705 aa9.47□□□□□ -0.89
PTPN20-210ENST00000437863 NUDCQ9Y266 331 aa9.47□□□□□ -0.89
PTPN20-210ENST00000437863 ZNF326Q5BKZ1 582 aaKnown RBP9.46□□□□□ -0.89
PTPN20-210ENST00000437863 SLKQ9H2G2 1235 aaPredicted RBP9.46□□□□□ -0.89
PTPN20-210ENST00000437863 TMEM51Q9NW97 253 aa9.46□□□□□ -0.89
PTPN20-210ENST00000437863 SMAP1Q8IYB5 467 aaPredicted RBP9.46□□□□□ -0.9
PTPN20-210ENST00000437863 ROCK2O75116 1388 aaKnown RBP9.45□□□□□ -0.9
PTPN20-210ENST00000437863 TMEM131LA2VDJ0 1609 aa9.45□□□□□ -0.9
PTPN20-210ENST00000437863 PPP4R3BQ5MIZ7 849 aa9.44□□□□□ -0.9
PTPN20-210ENST00000437863 TSPOAP1O95153 1857 aa9.44□□□□□ -0.9
PTPN20-210ENST00000437863 RIPK4P57078 832 aa9.44□□□□□ -0.9
PTPN20-210ENST00000437863 TRIM44Q96DX7 344 aaPredicted RBP9.44□□□□□ -0.9
PTPN20-210ENST00000437863 MYH16Q9H6N6 1097 aa9.43□□□□□ -0.9
PTPN20-210ENST00000437863 SMG6Q86US8 1419 aaKnown RBP9.43□□□□□ -0.9
PTPN20-210ENST00000437863 NCLP19338 710 aaKnown RBP9.42□□□□□ -0.9
PTPN20-210ENST00000437863 KTN1Q86UP2 1357 aaKnown RBP9.42□□□□□ -0.9
PTPN20-210ENST00000437863 RNF123Q5XPI4 1314 aa9.42□□□□□ -0.9
PTPN20-210ENST00000437863 NEXMIFQ5QGS0 1516 aa9.42□□□□□ -0.9
PTPN20-210ENST00000437863 ZBTB22O15209 634 aa9.42□□□□□ -0.9
PTPN20-210ENST00000437863 FTSJ3Q8IY81 847 aaKnown RBP9.42□□□□□ -0.9
PTPN20-210ENST00000437863 AFAP1Q8N556 730 aa9.42□□□□□ -0.9
PTPN20-210ENST00000437863 NPATQ14207 1427 aa9.42□□□□□ -0.9
PTPN20-210ENST00000437863 EIF4G2P78344 907 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTPN20-210ENST00000437863 SETD1AO15047 1707 aaKnown RBP9.41□□□□□ -0.9
PTPN20-210ENST00000437863 KNDC1Q76NI1 1749 aa9.41□□□□□ -0.9
PTPN20-210ENST00000437863 RPGRIP1LQ68CZ1 1315 aa9.41□□□□□ -0.9
PTPN20-210ENST00000437863 COL17A1Q9UMD9 1497 aaPredicted RBP9.41□□□□□ -0.9
PTPN20-210ENST00000437863 CHMP4AQ9BY43 222 aa9.41□□□□□ -0.9
PTPN20-210ENST00000437863 CLTCQ00610 1675 aaKnown RBP9.41□□□□□ -0.9
PTPN20-210ENST00000437863 CCDC7Q96M83 1385 aa9.41□□□□□ -0.9
PTPN20-210ENST00000437863 USP32Q8NFA0 1604 aa9.41□□□□□ -0.9
PTPN20-210ENST00000437863 E9PSI1 815 aa9.4□□□□□ -0.9
PTPN20-210ENST00000437863 SECISBP2LQ93073 1101 aaKnown RBP9.4□□□□□ -0.9
PTPN20-210ENST00000437863 MYOM1P52179 1685 aa9.4□□□□□ -0.9
PTPN20-210ENST00000437863 SBNO2Q9Y2G9 1366 aa9.4□□□□□ -0.9
PTPN20-210ENST00000437863 NBPF8Q3BBV2 869 aa9.4□□□□□ -0.9
PTPN20-210ENST00000437863 PRKRIP1Q9H875 184 aaPredicted RBP9.4□□□□□ -0.9
PTPN20-210ENST00000437863 DMTNQ08495 405 aa9.4□□□□□ -0.91
PTPN20-210ENST00000437863 TNNT2P45379 298 aaPredicted RBP9.39□□□□□ -0.91
PTPN20-210ENST00000437863 MYO5BQ9ULV0 1848 aa9.39□□□□□ -0.91
PTPN20-210ENST00000437863 FSD2A1L4K1 749 aa9.38□□□□□ -0.91
PTPN20-210ENST00000437863 BRD2P25440 801 aaKnown RBP9.38□□□□□ -0.91
PTPN20-210ENST00000437863 ADGRB1O14514 1584 aa9.38□□□□□ -0.91
PTPN20-210ENST00000437863 USP47Q96K76 1375 aa9.38□□□□□ -0.91
PTPN20-210ENST00000437863 ARHGEF28Q8N1W1 1705 aaKnown RBP9.38□□□□□ -0.91
PTPN20-210ENST00000437863 MAP7D2Q96T17 732 aa9.38□□□□□ -0.91
PTPN20-210ENST00000437863 R3HCC1Q9Y3T6 440 aaKnown RBP9.38□□□□□ -0.91
PTPN20-210ENST00000437863 INSRP06213 1382 aa9.38□□□□□ -0.91
PTPN20-210ENST00000437863 ERVK-7P63135 1459 aa9.38□□□□□ -0.91
PTPN20-210ENST00000437863 SCAF11Q99590 1463 aaKnown RBP9.38□□□□□ -0.91
PTPN20-210ENST00000437863 CDK11BP21127 795 aaKnown RBP9.38□□□□□ -0.91
PTPN20-210ENST00000437863 RRP1P56182 461 aaKnown RBP9.38□□□□□ -0.91
PTPN20-210ENST00000437863 NCBP3Q53F19 620 aaKnown RBP9.38□□□□□ -0.91
PTPN20-210ENST00000437863 PIK3C2GO75747 1445 aa9.37□□□□□ -0.91
PTPN20-210ENST00000437863 ZSCAN20P17040 1043 aaPredicted RBP9.37□□□□□ -0.91
PTPN20-210ENST00000437863 YEATS2Q9ULM3 1422 aa9.37□□□□□ -0.91
PTPN20-210ENST00000437863 HSPA5P11021 654 aaKnown RBP9.36□□□□□ -0.91
PTPN20-210ENST00000437863 DLC1Q96QB1 1528 aa9.36□□□□□ -0.91
PTPN20-210ENST00000437863 MRE11P49959 708 aa9.36□□□□□ -0.91
PTPN20-210ENST00000437863 DNTTIP2Q5QJE6 756 aaKnown RBP9.36□□□□□ -0.91
PTPN20-210ENST00000437863 UTP14CQ5TAP6 766 aaKnown RBP9.36□□□□□ -0.91
PTPN20-210ENST00000437863 SPRYD3Q8NCJ5 442 aa9.36□□□□□ -0.91
PTPN20-210ENST00000437863 CERS3Q8IU89 383 aa9.35□□□□□ -0.91
PTPN20-210ENST00000437863 GRPEL1Q9HAV7 217 aa9.35□□□□□ -0.91
PTPN20-210ENST00000437863 QRICH2Q9H0J4 1663 aa9.35□□□□□ -0.91
PTPN20-210ENST00000437863 PLIN1O60240 522 aa9.35□□□□□ -0.91
PTPN20-210ENST00000437863 UBR1Q8IWV7 1749 aa9.34□□□□□ -0.91
PTPN20-210ENST00000437863 ZNF142P52746 1687 aaPredicted RBP9.34□□□□□ -0.91
PTPN20-210ENST00000437863 UQCRHLA0A096LP55 91 aa9.34□□□□□ -0.92
PTPN20-210ENST00000437863 UQCRHP07919 91 aa9.34□□□□□ -0.92
PTPN20-210ENST00000437863 HAP1P54257 671 aaPredicted RBP9.33□□□□□ -0.92
PTPN20-210ENST00000437863 FAM161AQ3B820 660 aa9.33□□□□□ -0.92
PTPN20-210ENST00000437863 TMC1Q8TDI8 760 aa9.33□□□□□ -0.92
PTPN20-210ENST00000437863 PUS7Q96PZ0 661 aaKnown RBP9.33□□□□□ -0.92
PTPN20-210ENST00000437863 EIF3AQ14152 1382 aaKnown RBP9.33□□□□□ -0.92
PTPN20-210ENST00000437863 KIF3BO15066 747 aa9.33□□□□□ -0.92
PTPN20-210ENST00000437863 C8orf34Q49A92 452 aa9.33□□□□□ -0.92
PTPN20-210ENST00000437863 CGNQ9P2M7 1197 aaKnown RBP9.33□□□□□ -0.92
PTPN20-210ENST00000437863 FER1L4A9Z1Z3 1794 aa9.33□□□□□ -0.92
PTPN20-210ENST00000437863 IGSF3O75054 1194 aa9.32□□□□□ -0.92
PTPN20-210ENST00000437863 OFD1O75665 1012 aa9.32□□□□□ -0.92
PTPN20-210ENST00000437863 CBX1P83916 185 aa9.32□□□□□ -0.92
PTPN20-210ENST00000437863 TEX2Q8IWB9 1127 aa9.32□□□□□ -0.92
PTPN20-210ENST00000437863 RIMS1Q86UR5 1692 aaKnown RBP9.32□□□□□ -0.92
PTPN20-210ENST00000437863 CYB5RLQ6IPT4 315 aa9.32□□□□□ -0.92
PTPN20-210ENST00000437863 AEBP1Q8IUX7 1158 aa9.31□□□□□ -0.92
PTPN20-210ENST00000437863 SLC52A1Q9NWF4 448 aa9.31□□□□□ -0.92
PTPN20-210ENST00000437863 NPC1L1Q9UHC9 1359 aa9.31□□□□□ -0.92
PTPN20-210ENST00000437863 ANKRD26Q9UPS8 1709 aa9.31□□□□□ -0.92
PTPN20-210ENST00000437863 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.31□□□□□ -0.92
PTPN20-210ENST00000437863 RCAN3Q9UKA8 241 aa9.31□□□□□ -0.92
PTPN20-210ENST00000437863 DIP2AQ14689 1571 aa9.31□□□□□ -0.92
PTPN20-210ENST00000437863 FAM69CQ0P6D2 419 aa9.31□□□□□ -0.92
PTPN20-210ENST00000437863 NRXN3Q9Y4C0 1643 aa9.31□□□□□ -0.92
PTPN20-210ENST00000437863 C3P01024 1663 aa9.3□□□□□ -0.92
PTPN20-210ENST00000437863 TRAK2O60296 914 aa9.3□□□□□ -0.92
PTPN20-210ENST00000437863 MSNP26038 577 aaKnown RBP9.3□□□□□ -0.92
PTPN20-210ENST00000437863 KIF7Q2M1P5 1343 aa9.3□□□□□ -0.92
PTPN20-210ENST00000437863 ZBTB7CA1YPR0 619 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms