RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 STRCP1A6NGW2 1772 aa18.68■□□□□ 0.58
RPE-208ENST00000436630 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.68■□□□□ 0.58
RPE-208ENST00000436630 DISP3Q9P2K9 1392 aa18.68■□□□□ 0.58
RPE-208ENST00000436630 PLEKHH1Q9ULM0 1364 aa18.68■□□□□ 0.58
RPE-208ENST00000436630 NALCNQ8IZF0 1738 aa18.67■□□□□ 0.58
RPE-208ENST00000436630 PUS7Q96PZ0 661 aaKnown RBP18.67■□□□□ 0.58
RPE-208ENST00000436630 KIF7Q2M1P5 1343 aa18.67■□□□□ 0.58
RPE-208ENST00000436630 CDC42BPGQ6DT37 1551 aa18.67■□□□□ 0.58
RPE-208ENST00000436630 NCOA3Q9Y6Q9 1424 aa18.66■□□□□ 0.58
RPE-208ENST00000436630 WASHC2AQ641Q2 1341 aa18.66■□□□□ 0.58
RPE-208ENST00000436630 ADGRL3Q9HAR2 1447 aa18.65■□□□□ 0.58
RPE-208ENST00000436630 WAPLQ7Z5K2 1190 aa18.64■□□□□ 0.57
RPE-208ENST00000436630 MYOM1P52179 1685 aa18.63■□□□□ 0.57
RPE-208ENST00000436630 SAFB2Q14151 953 aaKnown RBP eCLIP18.63■□□□□ 0.57
RPE-208ENST00000436630 MINK1Q8N4C8 1332 aaPredicted RBP18.63■□□□□ 0.57
RPE-208ENST00000436630 ATAD2Q6PL18 1390 aa18.63■□□□□ 0.57
RPE-208ENST00000436630 NINLQ9Y2I6 1382 aa18.63■□□□□ 0.57
RPE-208ENST00000436630 ITSN1Q15811 1721 aa18.63■□□□□ 0.57
RPE-208ENST00000436630 FMN2Q9NZ56 1722 aa18.61■□□□□ 0.57
RPE-208ENST00000436630 C11orf95C9JLR9 678 aaPredicted RBP18.61■□□□□ 0.57
RPE-208ENST00000436630 DCCP43146 1447 aa18.6■□□□□ 0.57
RPE-208ENST00000436630 TOPAZ1Q8N9V7 1692 aa18.59■□□□□ 0.57
RPE-208ENST00000436630 ANKARQ7Z5J8 1434 aa18.58■□□□□ 0.57
RPE-208ENST00000436630 WASLO00401 505 aaPredicted RBP18.58■□□□□ 0.56
RPE-208ENST00000436630 XIRP1Q702N8 1843 aaKnown RBP18.58■□□□□ 0.56
RPE-208ENST00000436630 PROSER2Q86WR7 435 aaPredicted RBP18.57■□□□□ 0.56
RPE-208ENST00000436630 LRRC7Q96NW7 1537 aa18.56■□□□□ 0.56
RPE-208ENST00000436630 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
RPE-208ENST00000436630 ATP7BP35670 1465 aa18.56■□□□□ 0.56
RPE-208ENST00000436630 TMEM94Q12767 1356 aa18.55■□□□□ 0.56
RPE-208ENST00000436630 ZNF335Q9H4Z2 1342 aaPredicted RBP18.55■□□□□ 0.56
RPE-208ENST00000436630 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
RPE-208ENST00000436630 CDK19Q9BWU1 502 aa18.55■□□□□ 0.56
RPE-208ENST00000436630 USP32Q8NFA0 1604 aa18.53■□□□□ 0.56
RPE-208ENST00000436630 C14orf37Q86TY3 774 aa18.53■□□□□ 0.56
RPE-208ENST00000436630 MSH6P52701 1360 aa18.52■□□□□ 0.55
RPE-208ENST00000436630 LTBP4Q8N2S1 1624 aa18.52■□□□□ 0.55
RPE-208ENST00000436630 DDX10Q13206 875 aaKnown RBP18.51■□□□□ 0.55
RPE-208ENST00000436630 CABP2Q9NPB3 220 aa18.51■□□□□ 0.55
RPE-208ENST00000436630 C19orf44Q9H6X5 657 aa18.5■□□□□ 0.55
RPE-208ENST00000436630 AKAP12Q02952 1782 aa18.5■□□□□ 0.55
RPE-208ENST00000436630 ANKRD36BQ8N2N9 1353 aa18.49■□□□□ 0.55
RPE-208ENST00000436630 KIF1AQ12756 1690 aa18.49■□□□□ 0.55
RPE-208ENST00000436630 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
RPE-208ENST00000436630 RGPD8O14715 1765 aaPredicted RBP18.48■□□□□ 0.55
RPE-208ENST00000436630 CCDC61Q9Y6R9 512 aa18.48■□□□□ 0.55
RPE-208ENST00000436630 MON2Q7Z3U7 1717 aa18.47■□□□□ 0.55
RPE-208ENST00000436630 DIEXFQ68CQ4 756 aaKnown RBP18.47■□□□□ 0.55
RPE-208ENST00000436630 CADPS2Q86UW7 1296 aa18.47■□□□□ 0.55
RPE-208ENST00000436630 NUDT16Q96DE0 195 aaKnown RBP18.47■□□□□ 0.55
RPE-208ENST00000436630 TMC1Q8TDI8 760 aa18.46■□□□□ 0.55
RPE-208ENST00000436630 TERF2IPQ9NYB0 399 aa18.46■□□□□ 0.55
RPE-208ENST00000436630 ATF3P18847 181 aa18.45■□□□□ 0.54
RPE-208ENST00000436630 PRR36Q9H6K5 1346 aa18.45■□□□□ 0.54
RPE-208ENST00000436630 IQSEC2Q5JU85 1478 aa18.44■□□□□ 0.54
RPE-208ENST00000436630 MST1RQ04912 1400 aa18.43■□□□□ 0.54
RPE-208ENST00000436630 HDGFL2Q7Z4V5 671 aaPredicted RBP18.43■□□□□ 0.54
RPE-208ENST00000436630 ILDR1Q86SU0 546 aaPredicted RBP18.43■□□□□ 0.54
RPE-208ENST00000436630 RBM33Q96EV2 1170 aaKnown RBP18.43■□□□□ 0.54
RPE-208ENST00000436630 PANK3Q9H999 370 aa18.43■□□□□ 0.54
RPE-208ENST00000436630 CD163L1Q9NR16 1453 aa18.43■□□□□ 0.54
RPE-208ENST00000436630 C1orf167Q5SNV9 1468 aa18.42■□□□□ 0.54
RPE-208ENST00000436630 PLEKHG3A1L390 1219 aa18.42■□□□□ 0.54
RPE-208ENST00000436630 SLC12A5Q9H2X9 1139 aa18.42■□□□□ 0.54
RPE-208ENST00000436630 NRKQ7Z2Y5 1582 aa18.42■□□□□ 0.54
RPE-208ENST00000436630 A0A1W2PP64 1363 aa18.42■□□□□ 0.54
RPE-208ENST00000436630 CPSF1Q10570 1443 aaKnown RBP18.41■□□□□ 0.54
RPE-208ENST00000436630 POLR3AO14802 1390 aaPredicted RBP18.41■□□□□ 0.54
RPE-208ENST00000436630 NPC1L1Q9UHC9 1359 aa18.41■□□□□ 0.54
RPE-208ENST00000436630 KIF20BQ96Q89 1820 aa18.4■□□□□ 0.54
RPE-208ENST00000436630 CABP1Q9NZU7 370 aa18.4■□□□□ 0.54
RPE-208ENST00000436630 EDC4Q6P2E9 1401 aaKnown RBP18.4■□□□□ 0.54
RPE-208ENST00000436630 NSD3Q9BZ95 1437 aa18.4■□□□□ 0.54
RPE-208ENST00000436630 BRD4O60885 1362 aaPredicted RBP18.39■□□□□ 0.53
RPE-208ENST00000436630 KTN1Q86UP2 1357 aaKnown RBP18.39■□□□□ 0.53
RPE-208ENST00000436630 ANKRD26Q9UPS8 1709 aa18.38■□□□□ 0.53
RPE-208ENST00000436630 ZNF692Q9BU19 519 aaPredicted RBP18.38■□□□□ 0.53
RPE-208ENST00000436630 KNSTRNQ9Y448 316 aa18.38■□□□□ 0.53
RPE-208ENST00000436630 NSD2O96028 1365 aa18.38■□□□□ 0.53
RPE-208ENST00000436630 NUTM2FA1L443 756 aa18.36■□□□□ 0.53
RPE-208ENST00000436630 PER1O15534 1290 aaPredicted RBP18.36■□□□□ 0.53
RPE-208ENST00000436630 USP6P35125 1406 aa18.36■□□□□ 0.53
RPE-208ENST00000436630 PHF8Q9UPP1 1060 aa18.36■□□□□ 0.53
RPE-208ENST00000436630 CGNL1Q0VF96 1302 aa18.35■□□□□ 0.53
RPE-208ENST00000436630 ANP32CO43423 234 aa18.35■□□□□ 0.53
RPE-208ENST00000436630 CERKQ8TCT0 537 aa18.35■□□□□ 0.53
RPE-208ENST00000436630 ACEP12821 1306 aa18.34■□□□□ 0.53
RPE-208ENST00000436630 FBXO41Q8TF61 875 aa18.34■□□□□ 0.53
RPE-208ENST00000436630 ESCO1Q5FWF5 840 aa18.33■□□□□ 0.52
RPE-208ENST00000436630 NGDNQ8NEJ9 315 aaKnown RBP18.33■□□□□ 0.52
RPE-208ENST00000436630 USP54Q70EL1 1684 aa18.32■□□□□ 0.52
RPE-208ENST00000436630 CARD14Q9BXL6 1004 aa18.32■□□□□ 0.52
RPE-208ENST00000436630 AMER1Q5JTC6 1135 aaPredicted RBP18.31■□□□□ 0.52
RPE-208ENST00000436630 SSH2Q76I76 1423 aa18.31■□□□□ 0.52
RPE-208ENST00000436630 NHSL1Q5SYE7 1610 aa18.31■□□□□ 0.52
RPE-208ENST00000436630 TTC21AQ8NDW8 1320 aa18.3■□□□□ 0.52
RPE-208ENST00000436630 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
RPE-208ENST00000436630 TRPM3Q9HCF6 1732 aaPredicted RBP18.29■□□□□ 0.52
RPE-208ENST00000436630 RALBP1Q15311 655 aa18.29■□□□□ 0.52
RPE-208ENST00000436630 PMFBP1Q8TBY8 1022 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms