RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 NUDT7P0C024 238 aa13.67□□□□□ -0.22
NIF3L1-208ENST00000436412 ZNF687Q8N1G0 1237 aa13.67□□□□□ -0.22
NIF3L1-208ENST00000436412 RTN4Q9NQC3 1192 aaKnown RBP13.67□□□□□ -0.22
NIF3L1-208ENST00000436412 A2ML1A8K2U0 1454 aa13.67□□□□□ -0.22
NIF3L1-208ENST00000436412 INO80Q9ULG1 1556 aaPredicted RBP13.66□□□□□ -0.22
NIF3L1-208ENST00000436412 AMER1Q5JTC6 1135 aaPredicted RBP13.66□□□□□ -0.22
NIF3L1-208ENST00000436412 HSPA1LP34931 641 aa13.65□□□□□ -0.22
NIF3L1-208ENST00000436412 PTCD2Q8WV60 388 aaKnown RBP13.65□□□□□ -0.22
NIF3L1-208ENST00000436412 CCNB3Q8WWL7 1395 aa13.65□□□□□ -0.22
NIF3L1-208ENST00000436412 CPS1P31327 1500 aa13.64□□□□□ -0.23
NIF3L1-208ENST00000436412 ADGBQ8N7X0 1667 aa13.63□□□□□ -0.23
NIF3L1-208ENST00000436412 DNMT1P26358 1616 aaKnown RBP13.63□□□□□ -0.23
NIF3L1-208ENST00000436412 RTEL1-TNFRSF6BF6WH68 1400 aa13.62□□□□□ -0.23
NIF3L1-208ENST00000436412 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
NIF3L1-208ENST00000436412 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
NIF3L1-208ENST00000436412 LHX6Q9UPM6 363 aa13.61□□□□□ -0.23
NIF3L1-208ENST00000436412 MED1Q15648 1581 aaPredicted RBP13.61□□□□□ -0.23
NIF3L1-208ENST00000436412 DHX29Q7Z478 1369 aaKnown RBP13.6□□□□□ -0.23
NIF3L1-208ENST00000436412 TNRQ92752 1358 aa13.6□□□□□ -0.23
NIF3L1-208ENST00000436412 FAM135AQ9P2D6 1515 aa13.6□□□□□ -0.23
NIF3L1-208ENST00000436412 ANKLE2Q86XL3 938 aa13.6□□□□□ -0.23
NIF3L1-208ENST00000436412 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
NIF3L1-208ENST00000436412 THEMISQ8N1K5 641 aaPredicted RBP13.59□□□□□ -0.23
NIF3L1-208ENST00000436412 POLR1AO95602 1720 aaPredicted RBP13.59□□□□□ -0.23
NIF3L1-208ENST00000436412 PZPP20742 1482 aa13.57□□□□□ -0.24
NIF3L1-208ENST00000436412 MBD5Q9P267 1494 aa13.57□□□□□ -0.24
NIF3L1-208ENST00000436412 NEURL4Q96JN8 1562 aa13.57□□□□□ -0.24
NIF3L1-208ENST00000436412 RSPH4AQ5TD94 716 aa13.56□□□□□ -0.24
NIF3L1-208ENST00000436412 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
NIF3L1-208ENST00000436412 MED14O60244 1454 aa13.55□□□□□ -0.24
NIF3L1-208ENST00000436412 NLRP1Q9C000 1473 aa13.55□□□□□ -0.24
NIF3L1-208ENST00000436412 KIF3BO15066 747 aa13.55□□□□□ -0.24
NIF3L1-208ENST00000436412 PPP1R15BQ5SWA1 713 aa13.55□□□□□ -0.24
NIF3L1-208ENST00000436412 CADPS2Q86UW7 1296 aa13.55□□□□□ -0.24
NIF3L1-208ENST00000436412 ZNF644Q9H582 1327 aaPredicted RBP13.55□□□□□ -0.24
NIF3L1-208ENST00000436412 WASHC2CQ9Y4E1 1318 aa13.55□□□□□ -0.24
NIF3L1-208ENST00000436412 MIA2Q96PC5 1412 aa13.55□□□□□ -0.24
NIF3L1-208ENST00000436412 KDM5DQ9BY66 1539 aa13.54□□□□□ -0.24
NIF3L1-208ENST00000436412 PDE4AP27815 886 aa13.54□□□□□ -0.24
NIF3L1-208ENST00000436412 POTEEQ6S8J3 1075 aa13.54□□□□□ -0.24
NIF3L1-208ENST00000436412 OXER1Q8TDS5 423 aa13.54□□□□□ -0.24
NIF3L1-208ENST00000436412 BBXQ8WY36 941 aaPredicted RBP13.54□□□□□ -0.24
NIF3L1-208ENST00000436412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.54□□□□□ -0.24
NIF3L1-208ENST00000436412 VWDEQ8N2E2 1590 aa13.54□□□□□ -0.24
NIF3L1-208ENST00000436412 NPHP4O75161 1426 aaPredicted RBP13.53□□□□□ -0.24
NIF3L1-208ENST00000436412 DEPDC5O75140 1603 aa13.53□□□□□ -0.24
NIF3L1-208ENST00000436412 TIAM1Q13009 1591 aa13.52□□□□□ -0.25
NIF3L1-208ENST00000436412 UGGT1Q9NYU2 1555 aa13.52□□□□□ -0.25
NIF3L1-208ENST00000436412 CEP162Q5TB80 1403 aa13.51□□□□□ -0.25
NIF3L1-208ENST00000436412 MFSD10Q14728 455 aa13.51□□□□□ -0.25
NIF3L1-208ENST00000436412 EHBP1L1Q8N3D4 1523 aa13.5□□□□□ -0.25
NIF3L1-208ENST00000436412 CCDC141Q6ZP82 1450 aa13.5□□□□□ -0.25
NIF3L1-208ENST00000436412 LARP6Q9BRS8 491 aaKnown RBP13.5□□□□□ -0.25
NIF3L1-208ENST00000436412 ALKQ9UM73 1620 aa13.49□□□□□ -0.25
NIF3L1-208ENST00000436412 TSPY4P0CV99 314 aa13.47□□□□□ -0.25
NIF3L1-208ENST00000436412 TSPY10P0CW01 314 aa13.47□□□□□ -0.25
NIF3L1-208ENST00000436412 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
NIF3L1-208ENST00000436412 IQGAP1P46940 1657 aa13.47□□□□□ -0.25
NIF3L1-208ENST00000436412 LRRC7Q96NW7 1537 aa13.46□□□□□ -0.25
NIF3L1-208ENST00000436412 TBC1D12O60347 775 aa13.46□□□□□ -0.25
NIF3L1-208ENST00000436412 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
NIF3L1-208ENST00000436412 SYNMO15061 1565 aa13.45□□□□□ -0.26
NIF3L1-208ENST00000436412 CAMSAP2Q08AD1 1489 aa13.44□□□□□ -0.26
NIF3L1-208ENST00000436412 RNF17Q9BXT8 1623 aaKnown RBP13.44□□□□□ -0.26
NIF3L1-208ENST00000436412 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
NIF3L1-208ENST00000436412 PBX2P40425 430 aa13.43□□□□□ -0.26
NIF3L1-208ENST00000436412 LSM11P83369 360 aaKnown RBP eCLIP13.43□□□□□ -0.26
NIF3L1-208ENST00000436412 AXIN2Q9Y2T1 843 aa13.43□□□□□ -0.26
NIF3L1-208ENST00000436412 ARHGEF5Q12774 1597 aa13.42□□□□□ -0.26
NIF3L1-208ENST00000436412 STRCP1A6NGW2 1772 aa13.42□□□□□ -0.26
NIF3L1-208ENST00000436412 NCOA2Q15596 1464 aa13.42□□□□□ -0.26
NIF3L1-208ENST00000436412 ABCC3O15438 1527 aa13.41□□□□□ -0.26
NIF3L1-208ENST00000436412 ZC3H13Q5T200 1668 aaKnown RBP13.4□□□□□ -0.26
NIF3L1-208ENST00000436412 ERVK-7P63135 1459 aa13.4□□□□□ -0.26
NIF3L1-208ENST00000436412 ANKRD13DQ6ZTN6 518 aa13.39□□□□□ -0.27
NIF3L1-208ENST00000436412 EMILIN3Q9NT22 766 aa13.39□□□□□ -0.27
NIF3L1-208ENST00000436412 RGS17Q9UGC6 210 aaPredicted RBP13.39□□□□□ -0.27
NIF3L1-208ENST00000436412 SCAF11Q99590 1463 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-208ENST00000436412 FAM135BQ49AJ0 1406 aa13.38□□□□□ -0.27
NIF3L1-208ENST00000436412 TXNDC2Q86VQ3 553 aa13.37□□□□□ -0.27
NIF3L1-208ENST00000436412 ANO8Q9HCE9 1232 aaPredicted RBP13.37□□□□□ -0.27
NIF3L1-208ENST00000436412 EID1Q9Y6B2 187 aa13.37□□□□□ -0.27
NIF3L1-208ENST00000436412 EIF2AK4Q9P2K8 1649 aaKnown RBP13.37□□□□□ -0.27
NIF3L1-208ENST00000436412 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
NIF3L1-208ENST00000436412 SLIT1O75093 1534 aa13.36□□□□□ -0.27
NIF3L1-208ENST00000436412 LTKP29376 864 aa13.36□□□□□ -0.27
NIF3L1-208ENST00000436412 SPRYD3Q8NCJ5 442 aa13.36□□□□□ -0.27
NIF3L1-208ENST00000436412 CFAP65Q6ZU64 1925 aaKnown RBP13.36□□□□□ -0.27
NIF3L1-208ENST00000436412 MAST1Q9Y2H9 1570 aa13.36□□□□□ -0.27
NIF3L1-208ENST00000436412 UBR1Q8IWV7 1749 aa13.36□□□□□ -0.27
NIF3L1-208ENST00000436412 ARHGAP33O14559 1287 aa13.35□□□□□ -0.27
NIF3L1-208ENST00000436412 ARHGAP31Q2M1Z3 1444 aa13.34□□□□□ -0.27
NIF3L1-208ENST00000436412 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
NIF3L1-208ENST00000436412 EVI5O60447 810 aa13.32□□□□□ -0.28
NIF3L1-208ENST00000436412 PSEN2P49810 448 aa13.32□□□□□ -0.28
NIF3L1-208ENST00000436412 CAMK2BQ13554 666 aa13.32□□□□□ -0.28
NIF3L1-208ENST00000436412 DMRTA1Q5VZB9 504 aa13.32□□□□□ -0.28
NIF3L1-208ENST00000436412 RNF166Q96A37 237 aaPredicted RBP13.32□□□□□ -0.28
NIF3L1-208ENST00000436412 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.32□□□□□ -0.28
NIF3L1-208ENST00000436412 MROH1Q8NDA8 1641 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms