RNA–Protein interactions for RNA: ENST00000436280.5

GPN1-204, Transcript of GPN-loop GTPase 1, humanhuman

TSL 2

Gene GPN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-204ENST00000436280 SIRT1Q96EB6 747 aa20.43■□□□□ 0.86
GPN1-204ENST00000436280 KDM2AQ9Y2K7 1162 aa20.42■□□□□ 0.86
GPN1-204ENST00000436280 NHSL1Q5SYE7 1610 aa20.42■□□□□ 0.86
GPN1-204ENST00000436280 LRRC59Q96AG4 307 aaKnown RBP20.4■□□□□ 0.86
GPN1-204ENST00000436280 SHPRHQ149N8 1683 aa20.39■□□□□ 0.86
GPN1-204ENST00000436280 PLEKHH1Q9ULM0 1364 aa20.38■□□□□ 0.85
GPN1-204ENST00000436280 ORAI2Q96SN7 254 aa20.38■□□□□ 0.85
GPN1-204ENST00000436280 ESCO1Q5FWF5 840 aa20.36■□□□□ 0.85
GPN1-204ENST00000436280 MEX3CQ5U5Q3 659 aaKnown RBP20.36■□□□□ 0.85
GPN1-204ENST00000436280 DDX17Q92841 729 aaKnown RBP20.36■□□□□ 0.85
GPN1-204ENST00000436280 RGS17Q9UGC6 210 aaPredicted RBP20.35■□□□□ 0.85
GPN1-204ENST00000436280 DLC1Q96QB1 1528 aa20.35■□□□□ 0.85
GPN1-204ENST00000436280 ADGRB1O14514 1584 aa20.34■□□□□ 0.85
GPN1-204ENST00000436280 PRAM1Q96QH2 718 aa20.34■□□□□ 0.85
GPN1-204ENST00000436280 POGKQ9P215 609 aa20.34■□□□□ 0.85
GPN1-204ENST00000436280 SOS2Q07890 1332 aaPredicted RBP20.32■□□□□ 0.84
GPN1-204ENST00000436280 NPHP3Q7Z494 1330 aa20.32■□□□□ 0.84
GPN1-204ENST00000436280 LRP6O75581 1613 aa20.32■□□□□ 0.84
GPN1-204ENST00000436280 NUTM2FA1L443 756 aa20.31■□□□□ 0.84
GPN1-204ENST00000436280 TRAK1Q9UPV9 953 aa20.31■□□□□ 0.84
GPN1-204ENST00000436280 NUTM2BA6NNL0 878 aaPredicted RBP20.3■□□□□ 0.84
GPN1-204ENST00000436280 NUTM2EB1AL46 878 aaPredicted RBP20.3■□□□□ 0.84
GPN1-204ENST00000436280 SAFB2Q14151 953 aaKnown RBP eCLIP20.3■□□□□ 0.84
GPN1-204ENST00000436280 NUTM2AQ8IVF1 878 aaPredicted RBP20.3■□□□□ 0.84
GPN1-204ENST00000436280 PNPLA6Q8IY17 1366 aa20.3■□□□□ 0.84
GPN1-204ENST00000436280 FMN2Q9NZ56 1722 aa20.3■□□□□ 0.84
GPN1-204ENST00000436280 FOXO3O43524 673 aa20.27■□□□□ 0.84
GPN1-204ENST00000436280 ZNF772Q68DY9 489 aaPredicted RBP20.27■□□□□ 0.84
GPN1-204ENST00000436280 RGPD8O14715 1765 aaPredicted RBP20.26■□□□□ 0.83
GPN1-204ENST00000436280 POTEAQ6S8J7 498 aa20.26■□□□□ 0.83
GPN1-204ENST00000436280 KIF1AQ12756 1690 aa20.25■□□□□ 0.83
GPN1-204ENST00000436280 ADGRB2O60241 1585 aa20.25■□□□□ 0.83
GPN1-204ENST00000436280 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
GPN1-204ENST00000436280 PXDNQ92626 1479 aa20.24■□□□□ 0.83
GPN1-204ENST00000436280 EIF3AQ14152 1382 aaKnown RBP20.23■□□□□ 0.83
GPN1-204ENST00000436280 ANKARQ7Z5J8 1434 aa20.23■□□□□ 0.83
GPN1-204ENST00000436280 KIAA1210Q9ULL0 1709 aa20.23■□□□□ 0.83
GPN1-204ENST00000436280 PHF8Q9UPP1 1060 aa20.22■□□□□ 0.83
GPN1-204ENST00000436280 MINK1Q8N4C8 1332 aaPredicted RBP20.22■□□□□ 0.83
GPN1-204ENST00000436280 XPCQ01831 940 aaPredicted RBP20.21■□□□□ 0.83
GPN1-204ENST00000436280 HIRIP3Q9BW71 556 aaPredicted RBP20.21■□□□□ 0.83
GPN1-204ENST00000436280 ARHGEF28Q8N1W1 1705 aaKnown RBP20.19■□□□□ 0.82
GPN1-204ENST00000436280 L3MBTL2Q969R5 705 aa20.19■□□□□ 0.82
GPN1-204ENST00000436280 C8orf37Q96NL8 207 aa20.19■□□□□ 0.82
GPN1-204ENST00000436280 SIN3AQ96ST3 1273 aa20.19■□□□□ 0.82
GPN1-204ENST00000436280 COL22A1Q8NFW1 1626 aaPredicted RBP20.19■□□□□ 0.82
GPN1-204ENST00000436280 WASLO00401 505 aaPredicted RBP20.18■□□□□ 0.82
GPN1-204ENST00000436280 PSME1Q06323 249 aa20.18■□□□□ 0.82
GPN1-204ENST00000436280 NEUROD1Q13562 356 aa20.18■□□□□ 0.82
GPN1-204ENST00000436280 AFF2P51816 1311 aa20.18■□□□□ 0.82
GPN1-204ENST00000436280 ADAMTS2O95450 1211 aa20.17■□□□□ 0.82
GPN1-204ENST00000436280 KRT28Q7Z3Y7 464 aa20.17■□□□□ 0.82
GPN1-204ENST00000436280 TULP4Q9NRJ4 1543 aa20.16■□□□□ 0.82
GPN1-204ENST00000436280 NBPF1Q3BBV0 1214 aa20.15■□□□□ 0.82
GPN1-204ENST00000436280 NGLY1Q96IV0 654 aa20.15■□□□□ 0.82
GPN1-204ENST00000436280 SPATA31A3Q5VYP0 1347 aa20.15■□□□□ 0.82
GPN1-204ENST00000436280 USP32Q8NFA0 1604 aa20.14■□□□□ 0.81
GPN1-204ENST00000436280 PMFBP1Q8TBY8 1022 aa20.13■□□□□ 0.81
GPN1-204ENST00000436280 TNS3Q68CZ2 1445 aa20.12■□□□□ 0.81
GPN1-204ENST00000436280 SBNO1A3KN83 1393 aa20.12■□□□□ 0.81
GPN1-204ENST00000436280 RXRBP28702 533 aa20.12■□□□□ 0.81
GPN1-204ENST00000436280 MARF1Q9Y4F3 1742 aaKnown RBP20.11■□□□□ 0.81
GPN1-204ENST00000436280 GPRASP1Q5JY77 1395 aa20.1■□□□□ 0.81
GPN1-204ENST00000436280 PRR36Q9H6K5 1346 aa20.1■□□□□ 0.81
GPN1-204ENST00000436280 ARHGEF10O15013 1369 aa20.09■□□□□ 0.81
GPN1-204ENST00000436280 CENPJQ9HC77 1338 aaPredicted RBP20.08■□□□□ 0.81
GPN1-204ENST00000436280 NGDNQ8NEJ9 315 aaKnown RBP20.08■□□□□ 0.81
GPN1-204ENST00000436280 NUDT16Q96DE0 195 aaKnown RBP20.08■□□□□ 0.81
GPN1-204ENST00000436280 CDK19Q9BWU1 502 aa20.08■□□□□ 0.81
GPN1-204ENST00000436280 QTRT2Q9H974 415 aaKnown RBP20.08■□□□□ 0.81
GPN1-204ENST00000436280 USP21Q9UK80 565 aa20.08■□□□□ 0.81
GPN1-204ENST00000436280 HAP1P54257 671 aaPredicted RBP20.07■□□□□ 0.8
GPN1-204ENST00000436280 LMOD2Q6P5Q4 547 aa20.07■□□□□ 0.8
GPN1-204ENST00000436280 FNBP4Q8N3X1 1017 aaPredicted RBP20.07■□□□□ 0.8
GPN1-204ENST00000436280 ROCK2O75116 1388 aaKnown RBP20.07■□□□□ 0.8
GPN1-204ENST00000436280 ATP7BP35670 1465 aa20.06■□□□□ 0.8
GPN1-204ENST00000436280 CDK12Q9NYV4 1490 aaPredicted RBP20.06■□□□□ 0.8
GPN1-204ENST00000436280 RBM6P78332 1123 aaKnown RBP20.06■□□□□ 0.8
GPN1-204ENST00000436280 ITSN1Q15811 1721 aa20.06■□□□□ 0.8
GPN1-204ENST00000436280 TRPM1Q7Z4N2 1603 aa20.05■□□□□ 0.8
GPN1-204ENST00000436280 TRPC5Q9UL62 973 aaPredicted RBP20.05■□□□□ 0.8
GPN1-204ENST00000436280 TONSLQ96HA7 1378 aa20.05■□□□□ 0.8
GPN1-204ENST00000436280 CCDC61Q9Y6R9 512 aa20.04■□□□□ 0.8
GPN1-204ENST00000436280 ABCA3Q99758 1704 aa20.02■□□□□ 0.8
GPN1-204ENST00000436280 SRPK2P78362 688 aaKnown RBP20.02■□□□□ 0.8
GPN1-204ENST00000436280 TRPM3Q9HCF6 1732 aaPredicted RBP20■□□□□ 0.79
GPN1-204ENST00000436280 PAK3O75914 559 aaPredicted RBP20■□□□□ 0.79
GPN1-204ENST00000436280 CABLES1Q8TDN4 633 aa20■□□□□ 0.79
GPN1-204ENST00000436280 QRICH2Q9H0J4 1663 aa20■□□□□ 0.79
GPN1-204ENST00000436280 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
GPN1-204ENST00000436280 ATRNO75882 1429 aa19.99■□□□□ 0.79
GPN1-204ENST00000436280 BCL9LQ86UU0 1499 aa19.99■□□□□ 0.79
GPN1-204ENST00000436280 POLR3AO14802 1390 aaPredicted RBP19.98■□□□□ 0.79
GPN1-204ENST00000436280 TOPAZ1Q8N9V7 1692 aa19.98■□□□□ 0.79
GPN1-204ENST00000436280 PLEKHG3A1L390 1219 aa19.98■□□□□ 0.79
GPN1-204ENST00000436280 NBPF8Q3BBV2 869 aa19.98■□□□□ 0.79
GPN1-204ENST00000436280 ACEP12821 1306 aa19.97■□□□□ 0.79
GPN1-204ENST00000436280 EVC2Q86UK5 1308 aa19.97■□□□□ 0.79
GPN1-204ENST00000436280 ALS2Q96Q42 1657 aa19.97■□□□□ 0.79
GPN1-204ENST00000436280 RGS12O14924 1447 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms