RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.86■□□□□ 0.93
TMEM40-204ENST00000435218 POLR3GLQ9BT43 218 aa20.85■□□□□ 0.93
TMEM40-204ENST00000435218 ROBO2Q9HCK4 1378 aa20.85■□□□□ 0.93
TMEM40-204ENST00000435218 PLEKHH1Q9ULM0 1364 aa20.84■□□□□ 0.93
TMEM40-204ENST00000435218 MIER1Q8N108 512 aa20.83■□□□□ 0.93
TMEM40-204ENST00000435218 AMOTL2Q9Y2J4 779 aa20.83■□□□□ 0.92
TMEM40-204ENST00000435218 WAPLQ7Z5K2 1190 aa20.81■□□□□ 0.92
TMEM40-204ENST00000435218 NCKAP5LQ9HCH0 1330 aa20.8■□□□□ 0.92
TMEM40-204ENST00000435218 SAFB2Q14151 953 aaKnown RBP eCLIP20.79■□□□□ 0.92
TMEM40-204ENST00000435218 NINLQ9Y2I6 1382 aa20.79■□□□□ 0.92
TMEM40-204ENST00000435218 MINK1Q8N4C8 1332 aaPredicted RBP20.79■□□□□ 0.92
TMEM40-204ENST00000435218 ATAD2Q6PL18 1390 aa20.78■□□□□ 0.92
TMEM40-204ENST00000435218 ANP32CO43423 234 aa20.78■□□□□ 0.92
TMEM40-204ENST00000435218 NALCNQ8IZF0 1738 aa20.76■□□□□ 0.91
TMEM40-204ENST00000435218 USP32Q8NFA0 1604 aa20.76■□□□□ 0.91
TMEM40-204ENST00000435218 TOPAZ1Q8N9V7 1692 aa20.76■□□□□ 0.91
TMEM40-204ENST00000435218 PER1O15534 1290 aaPredicted RBP20.76■□□□□ 0.91
TMEM40-204ENST00000435218 ITSN1Q15811 1721 aa20.75■□□□□ 0.91
TMEM40-204ENST00000435218 NKTRP30414 1462 aaKnown RBP20.75■□□□□ 0.91
TMEM40-204ENST00000435218 STRCP1A6NGW2 1772 aa20.74■□□□□ 0.91
TMEM40-204ENST00000435218 HSPA2P54652 639 aa20.74■□□□□ 0.91
TMEM40-204ENST00000435218 PANK3Q9H999 370 aa20.74■□□□□ 0.91
TMEM40-204ENST00000435218 KCNA6P17658 529 aa20.73■□□□□ 0.91
TMEM40-204ENST00000435218 CDK19Q9BWU1 502 aa20.73■□□□□ 0.91
TMEM40-204ENST00000435218 KTN1Q86UP2 1357 aaKnown RBP20.73■□□□□ 0.91
TMEM40-204ENST00000435218 FMN2Q9NZ56 1722 aa20.73■□□□□ 0.91
TMEM40-204ENST00000435218 WASLO00401 505 aaPredicted RBP20.73■□□□□ 0.91
TMEM40-204ENST00000435218 SRPK2P78362 688 aaKnown RBP20.72■□□□□ 0.91
TMEM40-204ENST00000435218 CABP2Q9NPB3 220 aa20.72■□□□□ 0.91
TMEM40-204ENST00000435218 CDC42BPGQ6DT37 1551 aa20.72■□□□□ 0.91
TMEM40-204ENST00000435218 AKAP12Q02952 1782 aa20.71■□□□□ 0.91
TMEM40-204ENST00000435218 PRKRIP1Q9H875 184 aaPredicted RBP20.71■□□□□ 0.91
TMEM40-204ENST00000435218 ATP7BP35670 1465 aa20.71■□□□□ 0.91
TMEM40-204ENST00000435218 ANKRD36BQ8N2N9 1353 aa20.7■□□□□ 0.9
TMEM40-204ENST00000435218 NPC1L1Q9UHC9 1359 aa20.7■□□□□ 0.9
TMEM40-204ENST00000435218 RGPD8O14715 1765 aaPredicted RBP20.7■□□□□ 0.9
TMEM40-204ENST00000435218 CCER2I3L3R5 266 aa20.68■□□□□ 0.9
TMEM40-204ENST00000435218 MON2Q7Z3U7 1717 aa20.68■□□□□ 0.9
TMEM40-204ENST00000435218 CD163L1Q9NR16 1453 aa20.68■□□□□ 0.9
TMEM40-204ENST00000435218 SLC12A5Q9H2X9 1139 aa20.67■□□□□ 0.9
TMEM40-204ENST00000435218 ADGRL3Q9HAR2 1447 aa20.66■□□□□ 0.9
TMEM40-204ENST00000435218 ANKRD26Q9UPS8 1709 aa20.66■□□□□ 0.9
TMEM40-204ENST00000435218 PARD3Q8TEW0 1356 aa20.65■□□□□ 0.9
TMEM40-204ENST00000435218 TMC1Q8TDI8 760 aa20.64■□□□□ 0.9
TMEM40-204ENST00000435218 KNSTRNQ9Y448 316 aa20.64■□□□□ 0.9
TMEM40-204ENST00000435218 ANKARQ7Z5J8 1434 aa20.64■□□□□ 0.89
TMEM40-204ENST00000435218 XIRP1Q702N8 1843 aaKnown RBP20.64■□□□□ 0.89
TMEM40-204ENST00000435218 KIF20BQ96Q89 1820 aa20.64■□□□□ 0.89
TMEM40-204ENST00000435218 NCOA3Q9Y6Q9 1424 aa20.63■□□□□ 0.89
TMEM40-204ENST00000435218 RALBP1Q15311 655 aa20.63■□□□□ 0.89
TMEM40-204ENST00000435218 AMER1Q5JTC6 1135 aaPredicted RBP20.63■□□□□ 0.89
TMEM40-204ENST00000435218 CARD14Q9BXL6 1004 aa20.63■□□□□ 0.89
TMEM40-204ENST00000435218 PPIP5K1Q6PFW1 1433 aa20.62■□□□□ 0.89
TMEM40-204ENST00000435218 A0A1W2PP64 1363 aa20.62■□□□□ 0.89
TMEM40-204ENST00000435218 NUDT16Q96DE0 195 aaKnown RBP20.62■□□□□ 0.89
TMEM40-204ENST00000435218 CCDC61Q9Y6R9 512 aa20.62■□□□□ 0.89
TMEM40-204ENST00000435218 NSD3Q9BZ95 1437 aa20.62■□□□□ 0.89
TMEM40-204ENST00000435218 CPSF1Q10570 1443 aaKnown RBP20.61■□□□□ 0.89
TMEM40-204ENST00000435218 TERF2IPQ9NYB0 399 aa20.61■□□□□ 0.89
TMEM40-204ENST00000435218 PRR36Q9H6K5 1346 aa20.6■□□□□ 0.89
TMEM40-204ENST00000435218 NRKQ7Z2Y5 1582 aa20.59■□□□□ 0.89
TMEM40-204ENST00000435218 CABP1Q9NZU7 370 aa20.58■□□□□ 0.89
TMEM40-204ENST00000435218 DMRT2Q9Y5R5 561 aa20.58■□□□□ 0.88
TMEM40-204ENST00000435218 NSD2O96028 1365 aa20.58■□□□□ 0.88
TMEM40-204ENST00000435218 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
TMEM40-204ENST00000435218 HDGFL2Q7Z4V5 671 aaPredicted RBP20.57■□□□□ 0.88
TMEM40-204ENST00000435218 PLEKHG3A1L390 1219 aa20.56■□□□□ 0.88
TMEM40-204ENST00000435218 DCCP43146 1447 aa20.56■□□□□ 0.88
TMEM40-204ENST00000435218 MYBBP1AQ9BQG0 1328 aaKnown RBP20.56■□□□□ 0.88
TMEM40-204ENST00000435218 PROSER2Q86WR7 435 aaPredicted RBP20.54■□□□□ 0.88
TMEM40-204ENST00000435218 EDC4Q6P2E9 1401 aaKnown RBP20.54■□□□□ 0.88
TMEM40-204ENST00000435218 CGNL1Q0VF96 1302 aa20.54■□□□□ 0.88
TMEM40-204ENST00000435218 CC2D1BQ5T0F9 858 aaKnown RBP20.53■□□□□ 0.88
TMEM40-204ENST00000435218 POLR3AO14802 1390 aaPredicted RBP20.52■□□□□ 0.88
TMEM40-204ENST00000435218 ZNF692Q9BU19 519 aaPredicted RBP20.52■□□□□ 0.87
TMEM40-204ENST00000435218 BRD4O60885 1362 aaPredicted RBP20.51■□□□□ 0.87
TMEM40-204ENST00000435218 TMEM94Q12767 1356 aa20.51■□□□□ 0.87
TMEM40-204ENST00000435218 LRRC7Q96NW7 1537 aa20.5■□□□□ 0.87
TMEM40-204ENST00000435218 KIF1AQ12756 1690 aa20.5■□□□□ 0.87
TMEM40-204ENST00000435218 C19orf44Q9H6X5 657 aa20.49■□□□□ 0.87
TMEM40-204ENST00000435218 NLRP13Q86W25 1043 aa20.48■□□□□ 0.87
TMEM40-204ENST00000435218 USP6P35125 1406 aa20.47■□□□□ 0.87
TMEM40-204ENST00000435218 USP54Q70EL1 1684 aa20.47■□□□□ 0.87
TMEM40-204ENST00000435218 ACEP12821 1306 aa20.47■□□□□ 0.87
TMEM40-204ENST00000435218 RBM33Q96EV2 1170 aaKnown RBP20.47■□□□□ 0.87
TMEM40-204ENST00000435218 SSH2Q76I76 1423 aa20.46■□□□□ 0.87
TMEM40-204ENST00000435218 ZNF335Q9H4Z2 1342 aaPredicted RBP20.46■□□□□ 0.87
TMEM40-204ENST00000435218 C14orf37Q86TY3 774 aa20.46■□□□□ 0.87
TMEM40-204ENST00000435218 NUTM2FA1L443 756 aa20.45■□□□□ 0.86
TMEM40-204ENST00000435218 CNGB1Q14028 1251 aaPredicted RBP20.45■□□□□ 0.86
TMEM40-204ENST00000435218 MRS2Q9HD23 443 aa20.45■□□□□ 0.86
TMEM40-204ENST00000435218 CCDC184Q52MB2 194 aa20.44■□□□□ 0.86
TMEM40-204ENST00000435218 FYB1O15117 783 aa20.43■□□□□ 0.86
TMEM40-204ENST00000435218 C1orf167Q5SNV9 1468 aa20.43■□□□□ 0.86
TMEM40-204ENST00000435218 MST1RQ04912 1400 aa20.43■□□□□ 0.86
TMEM40-204ENST00000435218 PPP2R1AP30153 589 aa20.43■□□□□ 0.86
TMEM40-204ENST00000435218 MSH6P52701 1360 aa20.42■□□□□ 0.86
TMEM40-204ENST00000435218 MAP2P11137 1827 aaKnown RBP20.41■□□□□ 0.86
TMEM40-204ENST00000435218 PIK3C2AO00443 1686 aa20.4■□□□□ 0.86
TMEM40-204ENST00000435218 CADPS2Q86UW7 1296 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms