RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 DIAPH1O60610 1272 aaKnown RBP15.72■□□□□ 0.11
CLDN4-203ENST00000435050 SPHKAPQ2M3C7 1700 aa15.71■□□□□ 0.11
CLDN4-203ENST00000435050 PAK3O75914 559 aaPredicted RBP15.71■□□□□ 0.11
CLDN4-203ENST00000435050 ELL2O00472 640 aaPredicted RBP15.71■□□□□ 0.1
CLDN4-203ENST00000435050 NGDNQ8NEJ9 315 aaKnown RBP15.7■□□□□ 0.1
CLDN4-203ENST00000435050 PLEKHH1Q9ULM0 1364 aa15.7■□□□□ 0.1
CLDN4-203ENST00000435050 KIDINS220Q9ULH0 1771 aa15.7■□□□□ 0.1
CLDN4-203ENST00000435050 ZBTB47Q9UFB7 747 aaPredicted RBP15.7■□□□□ 0.1
CLDN4-203ENST00000435050 COG3Q96JB2 828 aa15.7■□□□□ 0.1
CLDN4-203ENST00000435050 MYH16Q9H6N6 1097 aa15.69■□□□□ 0.1
CLDN4-203ENST00000435050 DUSP27Q5VZP5 1158 aa15.69■□□□□ 0.1
CLDN4-203ENST00000435050 PANK1Q8TE04 598 aa15.69■□□□□ 0.1
CLDN4-203ENST00000435050 RIPK4P57078 832 aa15.69■□□□□ 0.1
CLDN4-203ENST00000435050 SLFN5Q08AF3 891 aa15.69■□□□□ 0.1
CLDN4-203ENST00000435050 PMFBP1Q8TBY8 1022 aa15.68■□□□□ 0.1
CLDN4-203ENST00000435050 NCKAP5LQ9HCH0 1330 aa15.68■□□□□ 0.1
CLDN4-203ENST00000435050 WWC1Q8IX03 1113 aa15.68■□□□□ 0.1
CLDN4-203ENST00000435050 TSR2Q969E8 191 aaKnown RBP15.68■□□□□ 0.1
CLDN4-203ENST00000435050 SMC4Q9NTJ3 1288 aa15.68■□□□□ 0.1
CLDN4-203ENST00000435050 CEP152O94986 1710 aa15.68■□□□□ 0.1
CLDN4-203ENST00000435050 ERVK-7P63135 1459 aa15.68■□□□□ 0.1
CLDN4-203ENST00000435050 ABCC3O15438 1527 aa15.68■□□□□ 0.1
CLDN4-203ENST00000435050 SPINK5Q9NQ38 1064 aaPredicted RBP15.68■□□□□ 0.1
CLDN4-203ENST00000435050 TCERG1O14776 1098 aaKnown RBP15.68■□□□□ 0.1
CLDN4-203ENST00000435050 CFAP74Q9C0B2 1584 aa15.67■□□□□ 0.1
CLDN4-203ENST00000435050 MADDQ8WXG6 1647 aa15.67■□□□□ 0.1
CLDN4-203ENST00000435050 RNF17Q9BXT8 1623 aaKnown RBP15.67■□□□□ 0.1
CLDN4-203ENST00000435050 ATAD2Q6PL18 1390 aa15.67■□□□□ 0.1
CLDN4-203ENST00000435050 ANP32EQ9BTT0 268 aa15.66■□□□□ 0.1
CLDN4-203ENST00000435050 RRS1Q15050 365 aaKnown RBP15.66■□□□□ 0.1
CLDN4-203ENST00000435050 NUTM2GQ5VZR2 741 aa15.66■□□□□ 0.1
CLDN4-203ENST00000435050 PPRC1Q5VV67 1664 aaKnown RBP15.66■□□□□ 0.1
CLDN4-203ENST00000435050 NME9Q86XW9 330 aa15.65■□□□□ 0.1
CLDN4-203ENST00000435050 PNNQ9H307 717 aaKnown RBP15.65■□□□□ 0.1
CLDN4-203ENST00000435050 KIF1BO60333 1816 aa15.65■□□□□ 0.1
CLDN4-203ENST00000435050 NUDT16Q96DE0 195 aaKnown RBP15.65■□□□□ 0.1
CLDN4-203ENST00000435050 RBM33Q96EV2 1170 aaKnown RBP15.65■□□□□ 0.1
CLDN4-203ENST00000435050 DMRT2Q9Y5R5 561 aa15.65■□□□□ 0.1
CLDN4-203ENST00000435050 ZMYM3Q14202 1370 aa15.65■□□□□ 0.1
CLDN4-203ENST00000435050 FYB1O15117 783 aa15.65■□□□□ 0.1
CLDN4-203ENST00000435050 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
CLDN4-203ENST00000435050 PRKAR2BP31323 418 aa15.64■□□□□ 0.09
CLDN4-203ENST00000435050 LTV1Q96GA3 475 aaPredicted RBP15.64■□□□□ 0.09
CLDN4-203ENST00000435050 MYOM2P54296 1465 aa15.64■□□□□ 0.09
CLDN4-203ENST00000435050 RIMS2Q9UQ26 1411 aa15.64■□□□□ 0.09
CLDN4-203ENST00000435050 ZRANB1Q9UGI0 708 aa15.64■□□□□ 0.09
CLDN4-203ENST00000435050 PIK3C2GO75747 1445 aa15.64■□□□□ 0.09
CLDN4-203ENST00000435050 A0A1W2PP64 1363 aa15.63■□□□□ 0.09
CLDN4-203ENST00000435050 ITPRIPQ8IWB1 547 aa15.62■□□□□ 0.09
CLDN4-203ENST00000435050 EMILIN1Q9Y6C2 1016 aa15.62■□□□□ 0.09
CLDN4-203ENST00000435050 YTHDC2Q9H6S0 1430 aaKnown RBP15.62■□□□□ 0.09
CLDN4-203ENST00000435050 MAP3K4Q9Y6R4 1608 aa15.62■□□□□ 0.09
CLDN4-203ENST00000435050 PPP6R1Q9UPN7 881 aa15.62■□□□□ 0.09
CLDN4-203ENST00000435050 ANKRD36BQ8N2N9 1353 aa15.62■□□□□ 0.09
CLDN4-203ENST00000435050 WASLO00401 505 aaPredicted RBP15.61■□□□□ 0.09
CLDN4-203ENST00000435050 ABCA6Q8N139 1617 aa15.61■□□□□ 0.09
CLDN4-203ENST00000435050 CCDC61Q9Y6R9 512 aa15.61■□□□□ 0.09
CLDN4-203ENST00000435050 TNRQ92752 1358 aa15.61■□□□□ 0.09
CLDN4-203ENST00000435050 PDE4AP27815 886 aa15.61■□□□□ 0.09
CLDN4-203ENST00000435050 EXOSC9Q06265 439 aaKnown RBP15.6■□□□□ 0.09
CLDN4-203ENST00000435050 THUMPD2Q9BTF0 503 aaKnown RBP15.6■□□□□ 0.09
CLDN4-203ENST00000435050 AMPHP49418 695 aa15.59■□□□□ 0.09
CLDN4-203ENST00000435050 NOP58Q9Y2X3 529 aaKnown RBP15.59■□□□□ 0.09
CLDN4-203ENST00000435050 POLR1AO95602 1720 aaPredicted RBP15.58■□□□□ 0.08
CLDN4-203ENST00000435050 NGEFQ8N5V2 710 aa15.57■□□□□ 0.08
CLDN4-203ENST00000435050 TMPOP42166 694 aaKnown RBP15.57■□□□□ 0.08
CLDN4-203ENST00000435050 DIP2CQ9Y2E4 1556 aa15.57■□□□□ 0.08
CLDN4-203ENST00000435050 KDM5AP29375 1690 aaKnown RBP15.57■□□□□ 0.08
CLDN4-203ENST00000435050 CENPQQ7L2Z9 268 aaPredicted RBP15.56■□□□□ 0.08
CLDN4-203ENST00000435050 FRMPD1Q5SYB0 1578 aa15.56■□□□□ 0.08
CLDN4-203ENST00000435050 RIMBP3CA6NJZ7 1639 aa15.56■□□□□ 0.08
CLDN4-203ENST00000435050 RIMBP3BA6NNM3 1639 aa15.56■□□□□ 0.08
CLDN4-203ENST00000435050 RIMBP3Q9UFD9 1639 aa15.56■□□□□ 0.08
CLDN4-203ENST00000435050 AMOTL2Q9Y2J4 779 aa15.56■□□□□ 0.08
CLDN4-203ENST00000435050 NPC1L1Q9UHC9 1359 aa15.56■□□□□ 0.08
CLDN4-203ENST00000435050 THEMISQ8N1K5 641 aaPredicted RBP15.56■□□□□ 0.08
CLDN4-203ENST00000435050 MROH1Q8NDA8 1641 aa15.55■□□□□ 0.08
CLDN4-203ENST00000435050 BLMP54132 1417 aaPredicted RBP15.55■□□□□ 0.08
CLDN4-203ENST00000435050 SBNO2Q9Y2G9 1366 aa15.55■□□□□ 0.08
CLDN4-203ENST00000435050 POLR3AO14802 1390 aaPredicted RBP15.55■□□□□ 0.08
CLDN4-203ENST00000435050 ADGRB3O60242 1522 aa15.55■□□□□ 0.08
CLDN4-203ENST00000435050 ZKSCAN2Q63HK3 967 aa15.54■□□□□ 0.08
CLDN4-203ENST00000435050 RNF123Q5XPI4 1314 aa15.54■□□□□ 0.08
CLDN4-203ENST00000435050 VWDEQ8N2E2 1590 aa15.54■□□□□ 0.08
CLDN4-203ENST00000435050 SYNMO15061 1565 aa15.54■□□□□ 0.08
CLDN4-203ENST00000435050 DEPDC5O75140 1603 aa15.53■□□□□ 0.08
CLDN4-203ENST00000435050 LMTK2Q8IWU2 1503 aa15.53■□□□□ 0.08
CLDN4-203ENST00000435050 TNNQ9UQP3 1299 aa15.53■□□□□ 0.08
CLDN4-203ENST00000435050 NLRP6P59044 892 aa15.53■□□□□ 0.08
CLDN4-203ENST00000435050 WDR63Q8IWG1 891 aa15.53■□□□□ 0.08
CLDN4-203ENST00000435050 LTKP29376 864 aa15.52■□□□□ 0.07
CLDN4-203ENST00000435050 DCTN1Q14203 1278 aa15.52■□□□□ 0.07
CLDN4-203ENST00000435050 SULT6B1Q6IMI4 303 aa15.52■□□□□ 0.07
CLDN4-203ENST00000435050 RTF1Q92541 710 aaKnown RBP15.52■□□□□ 0.07
CLDN4-203ENST00000435050 NKTRP30414 1462 aaKnown RBP15.52■□□□□ 0.07
CLDN4-203ENST00000435050 UPF2Q9HAU5 1272 aaKnown RBP15.51■□□□□ 0.07
CLDN4-203ENST00000435050 RARSP54136 660 aaKnown RBP15.51■□□□□ 0.07
CLDN4-203ENST00000435050 DZIP1LQ8IYY4 767 aaKnown RBP15.51■□□□□ 0.07
CLDN4-203ENST00000435050 FANCIQ9NVI1 1328 aa15.51■□□□□ 0.07
CLDN4-203ENST00000435050 METP08581 1390 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms