RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 POGZQ7Z3K3 1410 aa20.16■□□□□ 0.82
SCARF1-203ENST00000434376 POLR1AO95602 1720 aaPredicted RBP20.16■□□□□ 0.82
SCARF1-203ENST00000434376 SLC24A1O60721 1099 aa20.15■□□□□ 0.82
SCARF1-203ENST00000434376 RBM33Q96EV2 1170 aaKnown RBP20.14■□□□□ 0.82
SCARF1-203ENST00000434376 ASXL1Q8IXJ9 1541 aa20.14■□□□□ 0.81
SCARF1-203ENST00000434376 SLC26A8Q96RN1 970 aa20.13■□□□□ 0.81
SCARF1-203ENST00000434376 MADDQ8WXG6 1647 aa20.13■□□□□ 0.81
SCARF1-203ENST00000434376 TRHP20396 242 aaPredicted RBP20.12■□□□□ 0.81
SCARF1-203ENST00000434376 EIF2AK4Q9P2K8 1649 aaKnown RBP20.12■□□□□ 0.81
SCARF1-203ENST00000434376 MAPK8IP3Q9UPT6 1336 aa20.12■□□□□ 0.81
SCARF1-203ENST00000434376 DAXXQ9UER7 740 aaPredicted RBP20.12■□□□□ 0.81
SCARF1-203ENST00000434376 STAC3Q96MF2 364 aa20.11■□□□□ 0.81
SCARF1-203ENST00000434376 E9PSI1 815 aa20.11■□□□□ 0.81
SCARF1-203ENST00000434376 EIF5BO60841 1220 aaKnown RBP20.11■□□□□ 0.81
SCARF1-203ENST00000434376 CEP152O94986 1710 aa20.11■□□□□ 0.81
SCARF1-203ENST00000434376 SPHKAPQ2M3C7 1700 aa20.11■□□□□ 0.81
SCARF1-203ENST00000434376 RRS1Q15050 365 aaKnown RBP20.1■□□□□ 0.81
SCARF1-203ENST00000434376 RUNDC1Q96C34 613 aa20.1■□□□□ 0.81
SCARF1-203ENST00000434376 KIDINS220Q9ULH0 1771 aa20.09■□□□□ 0.81
SCARF1-203ENST00000434376 ZBTB7CA1YPR0 619 aa20.09■□□□□ 0.81
SCARF1-203ENST00000434376 TSPOAP1O95153 1857 aa20.08■□□□□ 0.81
SCARF1-203ENST00000434376 HDGFL2Q7Z4V5 671 aaPredicted RBP20.08■□□□□ 0.8
SCARF1-203ENST00000434376 IGHDP01880 384 aa20.07■□□□□ 0.8
SCARF1-203ENST00000434376 FTSJ3Q8IY81 847 aaKnown RBP20.07■□□□□ 0.8
SCARF1-203ENST00000434376 SLC52A1Q9NWF4 448 aa20.07■□□□□ 0.8
SCARF1-203ENST00000434376 TERF2IPQ9NYB0 399 aa20.07■□□□□ 0.8
SCARF1-203ENST00000434376 ABCA9Q8IUA7 1624 aa20.07■□□□□ 0.8
SCARF1-203ENST00000434376 PPRC1Q5VV67 1664 aaKnown RBP20.07■□□□□ 0.8
SCARF1-203ENST00000434376 FYB1O15117 783 aa20.07■□□□□ 0.8
SCARF1-203ENST00000434376 RLBP1P12271 317 aa20.06■□□□□ 0.8
SCARF1-203ENST00000434376 NUTM2GQ5VZR2 741 aa20.06■□□□□ 0.8
SCARF1-203ENST00000434376 C14orf37Q86TY3 774 aa20.06■□□□□ 0.8
SCARF1-203ENST00000434376 EMILIN1Q9Y6C2 1016 aa20.06■□□□□ 0.8
SCARF1-203ENST00000434376 RIPK4P57078 832 aa20.06■□□□□ 0.8
SCARF1-203ENST00000434376 NME9Q86XW9 330 aa20.06■□□□□ 0.8
SCARF1-203ENST00000434376 SMC4Q9NTJ3 1288 aa20.05■□□□□ 0.8
SCARF1-203ENST00000434376 EXOSC9Q06265 439 aaKnown RBP20.05■□□□□ 0.8
SCARF1-203ENST00000434376 BLMP54132 1417 aaPredicted RBP20.05■□□□□ 0.8
SCARF1-203ENST00000434376 TET3O43151 1660 aa20.05■□□□□ 0.8
SCARF1-203ENST00000434376 INO80Q9ULG1 1556 aaPredicted RBP20.04■□□□□ 0.8
SCARF1-203ENST00000434376 EFCAB6Q5THR3 1501 aa20.04■□□□□ 0.8
SCARF1-203ENST00000434376 SPRYD3Q8NCJ5 442 aa20.04■□□□□ 0.8
SCARF1-203ENST00000434376 ABCA6Q8N139 1617 aa20.03■□□□□ 0.8
SCARF1-203ENST00000434376 A0A1W2PP64 1363 aa20.03■□□□□ 0.8
SCARF1-203ENST00000434376 RNF17Q9BXT8 1623 aaKnown RBP20.03■□□□□ 0.8
SCARF1-203ENST00000434376 PMFBP1Q8TBY8 1022 aa20.03■□□□□ 0.8
SCARF1-203ENST00000434376 BACH2Q9BYV9 841 aa20.03■□□□□ 0.8
SCARF1-203ENST00000434376 DCTN1Q14203 1278 aa20.02■□□□□ 0.8
SCARF1-203ENST00000434376 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.79
SCARF1-203ENST00000434376 PRKAR2BP31323 418 aa20.01■□□□□ 0.79
SCARF1-203ENST00000434376 BRPF3Q9ULD4 1205 aa20■□□□□ 0.79
SCARF1-203ENST00000434376 MROH1Q8NDA8 1641 aa20■□□□□ 0.79
SCARF1-203ENST00000434376 DIAPH1O60610 1272 aaKnown RBP20■□□□□ 0.79
SCARF1-203ENST00000434376 ZNF521Q96K83 1311 aa20■□□□□ 0.79
SCARF1-203ENST00000434376 MROH2AA6NES4 1674 aa19.99■□□□□ 0.79
SCARF1-203ENST00000434376 RPGRIP1LQ68CZ1 1315 aa19.99■□□□□ 0.79
SCARF1-203ENST00000434376 PIK3C2GO75747 1445 aa19.99■□□□□ 0.79
SCARF1-203ENST00000434376 MAP3K4Q9Y6R4 1608 aa19.98■□□□□ 0.79
SCARF1-203ENST00000434376 RARSP54136 660 aaKnown RBP19.98■□□□□ 0.79
SCARF1-203ENST00000434376 KIF1BO60333 1816 aa19.97■□□□□ 0.79
SCARF1-203ENST00000434376 FAM83GA6ND36 823 aa19.96■□□□□ 0.79
SCARF1-203ENST00000434376 ABCC3O15438 1527 aa19.96■□□□□ 0.79
SCARF1-203ENST00000434376 ZMYM4Q5VZL5 1548 aa19.96■□□□□ 0.79
SCARF1-203ENST00000434376 CENPQQ7L2Z9 268 aaPredicted RBP19.96■□□□□ 0.79
SCARF1-203ENST00000434376 ARXQ96QS3 562 aa19.96■□□□□ 0.79
SCARF1-203ENST00000434376 FRMPD1Q5SYB0 1578 aa19.96■□□□□ 0.79
SCARF1-203ENST00000434376 TMPOP42166 694 aaKnown RBP19.96■□□□□ 0.79
SCARF1-203ENST00000434376 C1orf115Q9H7X2 142 aa19.96■□□□□ 0.79
SCARF1-203ENST00000434376 MLH3Q9UHC1 1453 aa19.95■□□□□ 0.78
SCARF1-203ENST00000434376 LTV1Q96GA3 475 aaPredicted RBP19.95■□□□□ 0.78
SCARF1-203ENST00000434376 PHACTR3Q96KR7 559 aa19.95■□□□□ 0.78
SCARF1-203ENST00000434376 APBB1O00213 710 aa19.94■□□□□ 0.78
SCARF1-203ENST00000434376 PCDHB15Q9Y5E8 787 aa19.94■□□□□ 0.78
SCARF1-203ENST00000434376 NKTRP30414 1462 aaKnown RBP19.93■□□□□ 0.78
SCARF1-203ENST00000434376 HECW2Q9P2P5 1572 aa19.92■□□□□ 0.78
SCARF1-203ENST00000434376 MYH16Q9H6N6 1097 aa19.92■□□□□ 0.78
SCARF1-203ENST00000434376 ARAP3Q8WWN8 1544 aa19.92■□□□□ 0.78
SCARF1-203ENST00000434376 KDM5AP29375 1690 aaKnown RBP19.92■□□□□ 0.78
SCARF1-203ENST00000434376 SSH1Q8WYL5 1049 aa19.91■□□□□ 0.78
SCARF1-203ENST00000434376 NUDT16Q96DE0 195 aaKnown RBP19.91■□□□□ 0.78
SCARF1-203ENST00000434376 IQGAP1P46940 1657 aa19.91■□□□□ 0.78
SCARF1-203ENST00000434376 ANKRD36BQ8N2N9 1353 aa19.9■□□□□ 0.78
SCARF1-203ENST00000434376 SEC24BO95487 1268 aa19.9■□□□□ 0.78
SCARF1-203ENST00000434376 SLKQ9H2G2 1235 aaPredicted RBP19.9■□□□□ 0.78
SCARF1-203ENST00000434376 MIS18AQ9NYP9 233 aa19.9■□□□□ 0.78
SCARF1-203ENST00000434376 NOB1Q9ULX3 412 aaKnown RBP19.9■□□□□ 0.78
SCARF1-203ENST00000434376 LMOD2Q6P5Q4 547 aa19.89■□□□□ 0.77
SCARF1-203ENST00000434376 MYOM2P54296 1465 aa19.89■□□□□ 0.77
SCARF1-203ENST00000434376 NECTIN2Q92692 538 aa19.89■□□□□ 0.77
SCARF1-203ENST00000434376 YTHDC2Q9H6S0 1430 aaKnown RBP19.89■□□□□ 0.77
SCARF1-203ENST00000434376 SYNMO15061 1565 aa19.89■□□□□ 0.77
SCARF1-203ENST00000434376 AEBP1Q8IUX7 1158 aa19.88■□□□□ 0.77
SCARF1-203ENST00000434376 POLKQ9UBT6 870 aa19.88■□□□□ 0.77
SCARF1-203ENST00000434376 POLR3AO14802 1390 aaPredicted RBP19.88■□□□□ 0.77
SCARF1-203ENST00000434376 KRT24Q2M2I5 525 aa19.87■□□□□ 0.77
SCARF1-203ENST00000434376 COG3Q96JB2 828 aa19.87■□□□□ 0.77
SCARF1-203ENST00000434376 VWDEQ8N2E2 1590 aa19.87■□□□□ 0.77
SCARF1-203ENST00000434376 DEPDC5O75140 1603 aa19.86■□□□□ 0.77
SCARF1-203ENST00000434376 FAM161AQ3B820 660 aa19.86■□□□□ 0.77
SCARF1-203ENST00000434376 ZNF428Q96B54 188 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms