RNA–Protein interactions for RNA: ENST00000433619.2

FAM3A-211, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-211ENST00000433619 POGKQ9P215 609 aa27.74■■■□□ 2.03
FAM3A-211ENST00000433619 PHLPP1O60346 1717 aa27.74■■■□□ 2.03
FAM3A-211ENST00000433619 CDC42BPGQ6DT37 1551 aa27.73■■■□□ 2.03
FAM3A-211ENST00000433619 AHDC1Q5TGY3 1603 aaPredicted RBP27.73■■■□□ 2.03
FAM3A-211ENST00000433619 KIAA1210Q9ULL0 1709 aa27.72■■■□□ 2.03
FAM3A-211ENST00000433619 PCGF6Q9BYE7 350 aa27.72■■■□□ 2.03
FAM3A-211ENST00000433619 NBPF1Q3BBV0 1214 aa27.71■■■□□ 2.03
FAM3A-211ENST00000433619 ORAI2Q96SN7 254 aa27.71■■■□□ 2.03
FAM3A-211ENST00000433619 DISP3Q9P2K9 1392 aa27.7■■■□□ 2.02
FAM3A-211ENST00000433619 SAFB2Q14151 953 aaKnown RBP eCLIP27.69■■■□□ 2.02
FAM3A-211ENST00000433619 COL16A1Q07092 1604 aaPredicted RBP27.69■■■□□ 2.02
FAM3A-211ENST00000433619 JCADQ9P266 1359 aa27.66■■■□□ 2.02
FAM3A-211ENST00000433619 ESCO1Q5FWF5 840 aa27.65■■■□□ 2.02
FAM3A-211ENST00000433619 NHSL1Q5SYE7 1610 aa27.64■■■□□ 2.02
FAM3A-211ENST00000433619 DDX17Q92841 729 aaKnown RBP27.64■■■□□ 2.02
FAM3A-211ENST00000433619 MED1Q15648 1581 aaPredicted RBP27.64■■■□□ 2.01
FAM3A-211ENST00000433619 NUTM2FA1L443 756 aa27.63■■■□□ 2.01
FAM3A-211ENST00000433619 LRRC59Q96AG4 307 aaKnown RBP27.62■■■□□ 2.01
FAM3A-211ENST00000433619 FMN2Q9NZ56 1722 aa27.61■■■□□ 2.01
FAM3A-211ENST00000433619 SOS2Q07890 1332 aaPredicted RBP27.59■■■□□ 2.01
FAM3A-211ENST00000433619 MINK1Q8N4C8 1332 aaPredicted RBP27.59■■■□□ 2.01
FAM3A-211ENST00000433619 TONSLQ96HA7 1378 aa27.59■■■□□ 2.01
FAM3A-211ENST00000433619 HIRIP3Q9BW71 556 aaPredicted RBP27.58■■■□□ 2.01
FAM3A-211ENST00000433619 ARHGEF28Q8N1W1 1705 aaKnown RBP27.58■■■□□ 2.01
FAM3A-211ENST00000433619 ADGRB2O60241 1585 aa27.57■■■□□ 2
FAM3A-211ENST00000433619 NBPF8Q3BBV2 869 aa27.57■■■□□ 2
FAM3A-211ENST00000433619 WASLO00401 505 aaPredicted RBP27.56■■■□□ 2
FAM3A-211ENST00000433619 SPATA31A6Q5VVP1 1343 aa27.56■■■□□ 2
FAM3A-211ENST00000433619 NPHP3Q7Z494 1330 aa27.56■■■□□ 2
FAM3A-211ENST00000433619 FOXO3O43524 673 aa27.55■■■□□ 2
FAM3A-211ENST00000433619 TRPM1Q7Z4N2 1603 aa27.55■■■□□ 2
FAM3A-211ENST00000433619 SHPRHQ149N8 1683 aa27.52■■■□□ 2
FAM3A-211ENST00000433619 ANKARQ7Z5J8 1434 aa27.52■■■□□ 2
FAM3A-211ENST00000433619 CLSPNQ9HAW4 1339 aa27.52■■■□□ 2
FAM3A-211ENST00000433619 PHF8Q9UPP1 1060 aa27.52■■■□□ 2
FAM3A-211ENST00000433619 ROCK2O75116 1388 aaKnown RBP27.5■■□□□ 1.99
FAM3A-211ENST00000433619 EIF3AQ14152 1382 aaKnown RBP27.5■■□□□ 1.99
FAM3A-211ENST00000433619 PHF23Q9BUL5 403 aaPredicted RBP27.5■■□□□ 1.99
FAM3A-211ENST00000433619 RGPD8O14715 1765 aaPredicted RBP27.5■■□□□ 1.99
FAM3A-211ENST00000433619 CENPJQ9HC77 1338 aaPredicted RBP27.48■■□□□ 1.99
FAM3A-211ENST00000433619 PNPLA6Q8IY17 1366 aa27.48■■□□□ 1.99
FAM3A-211ENST00000433619 PXDNQ92626 1479 aa27.47■■□□□ 1.99
FAM3A-211ENST00000433619 CDK19Q9BWU1 502 aa27.47■■□□□ 1.99
FAM3A-211ENST00000433619 GPRASP1Q5JY77 1395 aa27.47■■□□□ 1.99
FAM3A-211ENST00000433619 KIF1AQ12756 1690 aa27.46■■□□□ 1.99
FAM3A-211ENST00000433619 PRR36Q9H6K5 1346 aa27.46■■□□□ 1.99
FAM3A-211ENST00000433619 USP32Q8NFA0 1604 aa27.46■■□□□ 1.99
FAM3A-211ENST00000433619 ILDR2Q71H61 639 aa27.45■■□□□ 1.98
FAM3A-211ENST00000433619 TULP4Q9NRJ4 1543 aa27.45■■□□□ 1.98
FAM3A-211ENST00000433619 XPCQ01831 940 aaPredicted RBP27.44■■□□□ 1.98
FAM3A-211ENST00000433619 KRT28Q7Z3Y7 464 aa27.44■■□□□ 1.98
FAM3A-211ENST00000433619 RGS17Q9UGC6 210 aaPredicted RBP27.44■■□□□ 1.98
FAM3A-211ENST00000433619 NUDT16Q96DE0 195 aaKnown RBP27.43■■□□□ 1.98
FAM3A-211ENST00000433619 TIMELESSQ9UNS1 1208 aa27.43■■□□□ 1.98
FAM3A-211ENST00000433619 LRP6O75581 1613 aa27.42■■□□□ 1.98
FAM3A-211ENST00000433619 PMFBP1Q8TBY8 1022 aa27.42■■□□□ 1.98
FAM3A-211ENST00000433619 NUTM2BA6NNL0 878 aaPredicted RBP27.41■■□□□ 1.98
FAM3A-211ENST00000433619 NUTM2EB1AL46 878 aaPredicted RBP27.41■■□□□ 1.98
FAM3A-211ENST00000433619 PSME1Q06323 249 aa27.41■■□□□ 1.98
FAM3A-211ENST00000433619 NUTM2AQ8IVF1 878 aaPredicted RBP27.41■■□□□ 1.98
FAM3A-211ENST00000433619 CARD11Q9BXL7 1154 aa27.39■■□□□ 1.98
FAM3A-211ENST00000433619 SPATA31A3Q5VYP0 1347 aa27.39■■□□□ 1.97
FAM3A-211ENST00000433619 RALGAPBQ86X10 1494 aa27.38■■□□□ 1.97
FAM3A-211ENST00000433619 MEX3CQ5U5Q3 659 aaKnown RBP27.37■■□□□ 1.97
FAM3A-211ENST00000433619 CCDC61Q9Y6R9 512 aa27.37■■□□□ 1.97
FAM3A-211ENST00000433619 ATP7BP35670 1465 aa27.36■■□□□ 1.97
FAM3A-211ENST00000433619 CCER1Q8TC90 406 aaPredicted RBP27.35■■□□□ 1.97
FAM3A-211ENST00000433619 QRICH2Q9H0J4 1663 aa27.35■■□□□ 1.97
FAM3A-211ENST00000433619 SBNO1A3KN83 1393 aa27.35■■□□□ 1.97
FAM3A-211ENST00000433619 NGDNQ8NEJ9 315 aaKnown RBP27.34■■□□□ 1.97
FAM3A-211ENST00000433619 COL22A1Q8NFW1 1626 aaPredicted RBP27.34■■□□□ 1.97
FAM3A-211ENST00000433619 PLEKHG3A1L390 1219 aa27.33■■□□□ 1.97
FAM3A-211ENST00000433619 SRPK2P78362 688 aaKnown RBP27.33■■□□□ 1.97
FAM3A-211ENST00000433619 CABP2Q9NPB3 220 aa27.31■■□□□ 1.96
FAM3A-211ENST00000433619 EVC2Q86UK5 1308 aa27.31■■□□□ 1.96
FAM3A-211ENST00000433619 ITSN1Q15811 1721 aa27.3■■□□□ 1.96
FAM3A-211ENST00000433619 POTEAQ6S8J7 498 aa27.29■■□□□ 1.96
FAM3A-211ENST00000433619 TNS3Q68CZ2 1445 aa27.28■■□□□ 1.96
FAM3A-211ENST00000433619 POLR3AO14802 1390 aaPredicted RBP27.27■■□□□ 1.96
FAM3A-211ENST00000433619 ADAMTS2O95450 1211 aa27.27■■□□□ 1.96
FAM3A-211ENST00000433619 ZNF772Q68DY9 489 aaPredicted RBP27.27■■□□□ 1.96
FAM3A-211ENST00000433619 SBNO2Q9Y2G9 1366 aa27.26■■□□□ 1.95
FAM3A-211ENST00000433619 ACEP12821 1306 aa27.26■■□□□ 1.95
FAM3A-211ENST00000433619 ARHGEF10O15013 1369 aa27.25■■□□□ 1.95
FAM3A-211ENST00000433619 C8orf37Q96NL8 207 aa27.25■■□□□ 1.95
FAM3A-211ENST00000433619 TOPAZ1Q8N9V7 1692 aa27.24■■□□□ 1.95
FAM3A-211ENST00000433619 LMOD2Q6P5Q4 547 aa27.23■■□□□ 1.95
FAM3A-211ENST00000433619 NGLY1Q96IV0 654 aa27.23■■□□□ 1.95
FAM3A-211ENST00000433619 TRPM3Q9HCF6 1732 aaPredicted RBP27.23■■□□□ 1.95
FAM3A-211ENST00000433619 AFF2P51816 1311 aa27.22■■□□□ 1.95
FAM3A-211ENST00000433619 PPIP5K1Q6PFW1 1433 aa27.22■■□□□ 1.95
FAM3A-211ENST00000433619 CABP1Q9NZU7 370 aa27.21■■□□□ 1.95
FAM3A-211ENST00000433619 PAK3O75914 559 aaPredicted RBP27.19■■□□□ 1.94
FAM3A-211ENST00000433619 FNBP4Q8N3X1 1017 aaPredicted RBP27.19■■□□□ 1.94
FAM3A-211ENST00000433619 CABLES1Q8TDN4 633 aa27.18■■□□□ 1.94
FAM3A-211ENST00000433619 ST20-MTHFSA0A0A6YYL1 179 aa27.17■■□□□ 1.94
FAM3A-211ENST00000433619 SOCS7O14512 581 aa27.17■■□□□ 1.94
FAM3A-211ENST00000433619 ALS2Q96Q42 1657 aa27.17■■□□□ 1.94
FAM3A-211ENST00000433619 SLC24A1O60721 1099 aa27.16■■□□□ 1.94
FAM3A-211ENST00000433619 PUS7Q96PZ0 661 aaKnown RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms