RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 USP35Q9P2H5 1018 aa8.29□□□□□ -1.08
LINC00309-201ENST00000431020 EIF4G2P78344 907 aaKnown RBP eCLIP8.28□□□□□ -1.08
LINC00309-201ENST00000431020 CENPJQ9HC77 1338 aaPredicted RBP8.28□□□□□ -1.08
LINC00309-201ENST00000431020 SPATA31E1Q6ZUB1 1445 aa8.28□□□□□ -1.08
LINC00309-201ENST00000431020 VWDEQ8N2E2 1590 aa8.28□□□□□ -1.08
LINC00309-201ENST00000431020 SLC12A5Q9H2X9 1139 aa8.28□□□□□ -1.08
LINC00309-201ENST00000431020 CABP1Q9NZU7 370 aa8.28□□□□□ -1.08
LINC00309-201ENST00000431020 ACIN1Q9UKV3 1341 aaKnown RBP8.28□□□□□ -1.08
LINC00309-201ENST00000431020 FBLN1P23142 703 aa8.28□□□□□ -1.08
LINC00309-201ENST00000431020 PLEKHG1Q9ULL1 1385 aa8.27□□□□□ -1.08
LINC00309-201ENST00000431020 TRPM2O94759 1503 aa8.27□□□□□ -1.09
LINC00309-201ENST00000431020 LMTK2Q8IWU2 1503 aa8.27□□□□□ -1.09
LINC00309-201ENST00000431020 CADPS2Q86UW7 1296 aa8.27□□□□□ -1.09
LINC00309-201ENST00000431020 TULP1O00294 542 aaPredicted RBP8.27□□□□□ -1.09
LINC00309-201ENST00000431020 DDX10Q13206 875 aaKnown RBP8.27□□□□□ -1.09
LINC00309-201ENST00000431020 CCDC9Q9Y3X0 531 aaKnown RBP8.27□□□□□ -1.09
LINC00309-201ENST00000431020 KIF1BO60333 1816 aa8.26□□□□□ -1.09
LINC00309-201ENST00000431020 ADGRB3O60242 1522 aa8.26□□□□□ -1.09
LINC00309-201ENST00000431020 MEX3CQ5U5Q3 659 aaKnown RBP8.26□□□□□ -1.09
LINC00309-201ENST00000431020 ADAMTS13Q76LX8 1427 aa8.26□□□□□ -1.09
LINC00309-201ENST00000431020 PTPRUQ92729 1446 aa8.26□□□□□ -1.09
LINC00309-201ENST00000431020 ZC3H13Q5T200 1668 aaKnown RBP8.25□□□□□ -1.09
LINC00309-201ENST00000431020 MROH2AA6NES4 1674 aa8.25□□□□□ -1.09
LINC00309-201ENST00000431020 ZFYVE9O95405 1425 aa8.25□□□□□ -1.09
LINC00309-201ENST00000431020 UBR1Q8IWV7 1749 aa8.25□□□□□ -1.09
LINC00309-201ENST00000431020 TMEM131LA2VDJ0 1609 aa8.25□□□□□ -1.09
LINC00309-201ENST00000431020 ZC3H6P61129 1189 aaKnown RBP8.25□□□□□ -1.09
LINC00309-201ENST00000431020 PLCB2Q00722 1185 aa8.25□□□□□ -1.09
LINC00309-201ENST00000431020 NUDT16Q96DE0 195 aaKnown RBP8.25□□□□□ -1.09
LINC00309-201ENST00000431020 YTHDC2Q9H6S0 1430 aaKnown RBP8.24□□□□□ -1.09
LINC00309-201ENST00000431020 USP47Q96K76 1375 aa8.24□□□□□ -1.09
LINC00309-201ENST00000431020 LTV1Q96GA3 475 aaPredicted RBP8.24□□□□□ -1.09
LINC00309-201ENST00000431020 ABTB2Q8N961 1025 aa8.23□□□□□ -1.09
LINC00309-201ENST00000431020 STRCQ7RTU9 1775 aa8.23□□□□□ -1.09
LINC00309-201ENST00000431020 WASLO00401 505 aaPredicted RBP8.23□□□□□ -1.09
LINC00309-201ENST00000431020 CC2D1BQ5T0F9 858 aaKnown RBP8.23□□□□□ -1.09
LINC00309-201ENST00000431020 C8orf37Q96NL8 207 aa8.23□□□□□ -1.09
LINC00309-201ENST00000431020 PHF8Q9UPP1 1060 aa8.23□□□□□ -1.09
LINC00309-201ENST00000431020 BRINP3Q76B58 766 aa8.23□□□□□ -1.09
LINC00309-201ENST00000431020 ZRANB1Q9UGI0 708 aa8.23□□□□□ -1.09
LINC00309-201ENST00000431020 C11orf95C9JLR9 678 aaPredicted RBP8.22□□□□□ -1.09
LINC00309-201ENST00000431020 TMF1P82094 1093 aa8.22□□□□□ -1.09
LINC00309-201ENST00000431020 CHRNA2Q15822 529 aa8.22□□□□□ -1.09
LINC00309-201ENST00000431020 PRAG1Q86YV5 1406 aa8.22□□□□□ -1.09
LINC00309-201ENST00000431020 NLRP6P59044 892 aa8.21□□□□□ -1.09
LINC00309-201ENST00000431020 NEXMIFQ5QGS0 1516 aa8.21□□□□□ -1.09
LINC00309-201ENST00000431020 KRT28Q7Z3Y7 464 aa8.21□□□□□ -1.09
LINC00309-201ENST00000431020 EVC2Q86UK5 1308 aa8.21□□□□□ -1.09
LINC00309-201ENST00000431020 GGNBP2Q9H3C7 697 aa8.21□□□□□ -1.1
LINC00309-201ENST00000431020 STRN4Q9NRL3 753 aa8.21□□□□□ -1.1
LINC00309-201ENST00000431020 FKBP8Q14318 412 aa8.21□□□□□ -1.1
LINC00309-201ENST00000431020 KAT6BQ8WYB5 2073 aa8.2□□□□□ -1.1
LINC00309-201ENST00000431020 PIK3C2GO75747 1445 aa8.2□□□□□ -1.1
LINC00309-201ENST00000431020 PIAS4Q8N2W9 510 aaPredicted RBP8.2□□□□□ -1.1
LINC00309-201ENST00000431020 NGLY1Q96IV0 654 aa8.2□□□□□ -1.1
LINC00309-201ENST00000431020 CCDC61Q9Y6R9 512 aa8.2□□□□□ -1.1
LINC00309-201ENST00000431020 ALKQ9UM73 1620 aa8.2□□□□□ -1.1
LINC00309-201ENST00000431020 ACEP12821 1306 aa8.2□□□□□ -1.1
LINC00309-201ENST00000431020 IQGAP1P46940 1657 aa8.2□□□□□ -1.1
LINC00309-201ENST00000431020 PRR36Q9H6K5 1346 aa8.2□□□□□ -1.1
LINC00309-201ENST00000431020 FBXO41Q8TF61 875 aa8.19□□□□□ -1.1
LINC00309-201ENST00000431020 ARHGAP23Q9P227 1491 aa8.19□□□□□ -1.1
LINC00309-201ENST00000431020 NEURL4Q96JN8 1562 aa8.19□□□□□ -1.1
LINC00309-201ENST00000431020 LRPPRCP42704 1394 aaKnown RBP8.19□□□□□ -1.1
LINC00309-201ENST00000431020 CLSPNQ9HAW4 1339 aa8.18□□□□□ -1.1
LINC00309-201ENST00000431020 SLIT1O75093 1534 aa8.18□□□□□ -1.1
LINC00309-201ENST00000431020 GOLGB1Q14789 3259 aaKnown RBP8.18□□□□□ -1.1
LINC00309-201ENST00000431020 ZEB1P37275 1124 aaPredicted RBP8.18□□□□□ -1.1
LINC00309-201ENST00000431020 NME9Q86XW9 330 aa8.18□□□□□ -1.1
LINC00309-201ENST00000431020 PANK3Q9H999 370 aa8.18□□□□□ -1.1
LINC00309-201ENST00000431020 RNF216Q9NWF9 866 aaPredicted RBP8.18□□□□□ -1.1
LINC00309-201ENST00000431020 LRRC7Q96NW7 1537 aa8.18□□□□□ -1.1
LINC00309-201ENST00000431020 EP400Q96L91 3159 aa8.17□□□□□ -1.1
LINC00309-201ENST00000431020 CSB-PGBD3P0DP91 1061 aa8.17□□□□□ -1.1
LINC00309-201ENST00000431020 HDGFL2Q7Z4V5 671 aaPredicted RBP8.17□□□□□ -1.1
LINC00309-201ENST00000431020 EIF3AQ14152 1382 aaKnown RBP8.17□□□□□ -1.1
LINC00309-201ENST00000431020 ABCC11Q96J66 1382 aa8.17□□□□□ -1.1
LINC00309-201ENST00000431020 DISP3Q9P2K9 1392 aa8.16□□□□□ -1.1
LINC00309-201ENST00000431020 GPRASP1Q5JY77 1395 aa8.16□□□□□ -1.1
LINC00309-201ENST00000431020 RRS1Q15050 365 aaKnown RBP8.16□□□□□ -1.1
LINC00309-201ENST00000431020 PRDM11Q9NQV5 511 aa8.16□□□□□ -1.1
LINC00309-201ENST00000431020 FAM182BQ5T319 152 aa8.15□□□□□ -1.1
LINC00309-201ENST00000431020 STAC3Q96MF2 364 aa8.15□□□□□ -1.1
LINC00309-201ENST00000431020 EVA1CP58658 441 aa8.15□□□□□ -1.1
LINC00309-201ENST00000431020 TESK2Q96S53 571 aa8.15□□□□□ -1.1
LINC00309-201ENST00000431020 NPHP3Q7Z494 1330 aa8.15□□□□□ -1.11
LINC00309-201ENST00000431020 LRRC59Q96AG4 307 aaKnown RBP8.14□□□□□ -1.11
LINC00309-201ENST00000431020 KNSTRNQ9Y448 316 aa8.14□□□□□ -1.11
LINC00309-201ENST00000431020 SLC4A2P04920 1241 aa8.14□□□□□ -1.11
LINC00309-201ENST00000431020 TERF2IPQ9NYB0 399 aa8.14□□□□□ -1.11
LINC00309-201ENST00000431020 POLR1AO95602 1720 aaPredicted RBP8.14□□□□□ -1.11
LINC00309-201ENST00000431020 PODXL2Q9NZ53 605 aa8.14□□□□□ -1.11
LINC00309-201ENST00000431020 TAOK2Q9UL54 1235 aa8.14□□□□□ -1.11
LINC00309-201ENST00000431020 MED14O60244 1454 aa8.13□□□□□ -1.11
LINC00309-201ENST00000431020 SALL2Q9Y467 1007 aaPredicted RBP8.13□□□□□ -1.11
LINC00309-201ENST00000431020 KIF7Q2M1P5 1343 aa8.13□□□□□ -1.11
LINC00309-201ENST00000431020 KTN1Q86UP2 1357 aaKnown RBP8.13□□□□□ -1.11
LINC00309-201ENST00000431020 PPIP5K1Q6PFW1 1433 aa8.13□□□□□ -1.11
LINC00309-201ENST00000431020 PPLO60437 1756 aa8.13□□□□□ -1.11
LINC00309-201ENST00000431020 ZNF142P52746 1687 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms