RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 NOS1P29475 1434 aa19.04■□□□□ 0.64
SCAP-206ENST00000428413 PMFBP1Q8TBY8 1022 aa19.04■□□□□ 0.64
SCAP-206ENST00000428413 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
SCAP-206ENST00000428413 MBD5Q9P267 1494 aa19.03■□□□□ 0.64
SCAP-206ENST00000428413 RARSP54136 660 aaKnown RBP19.02■□□□□ 0.64
SCAP-206ENST00000428413 FOXD4L6Q3SYB3 417 aaPredicted RBP19.02■□□□□ 0.64
SCAP-206ENST00000428413 FOXD4L3Q6VB84 417 aaPredicted RBP19.02■□□□□ 0.64
SCAP-206ENST00000428413 RNF123Q5XPI4 1314 aa19.01■□□□□ 0.63
SCAP-206ENST00000428413 ZRANB1Q9UGI0 708 aa19.01■□□□□ 0.63
SCAP-206ENST00000428413 PLA2R1Q13018 1463 aa19■□□□□ 0.63
SCAP-206ENST00000428413 CDK19Q9BWU1 502 aa19■□□□□ 0.63
SCAP-206ENST00000428413 NUP160Q12769 1436 aa19■□□□□ 0.63
SCAP-206ENST00000428413 RBM33Q96EV2 1170 aaKnown RBP19■□□□□ 0.63
SCAP-206ENST00000428413 MIS18AQ9NYP9 233 aa19■□□□□ 0.63
SCAP-206ENST00000428413 SSH1Q8WYL5 1049 aa18.99■□□□□ 0.63
SCAP-206ENST00000428413 RSPH6AQ9H0K4 717 aa18.99■□□□□ 0.63
SCAP-206ENST00000428413 C8orf34Q49A92 452 aa18.97■□□□□ 0.63
SCAP-206ENST00000428413 HSCBQ8IWL3 235 aa18.97■□□□□ 0.63
SCAP-206ENST00000428413 MAGI2Q86UL8 1455 aa18.97■□□□□ 0.63
SCAP-206ENST00000428413 UHRF1BP1Q6BDS2 1440 aa18.97■□□□□ 0.63
SCAP-206ENST00000428413 EMILIN1Q9Y6C2 1016 aa18.97■□□□□ 0.63
SCAP-206ENST00000428413 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
SCAP-206ENST00000428413 ERCC6L2Q5T890 1561 aa18.96■□□□□ 0.63
SCAP-206ENST00000428413 TMEM57Q8N5G2 664 aa18.96■□□□□ 0.63
SCAP-206ENST00000428413 FAM83GA6ND36 823 aa18.96■□□□□ 0.63
SCAP-206ENST00000428413 ADGRL1O94910 1474 aa18.95■□□□□ 0.62
SCAP-206ENST00000428413 IPO8O15397 1037 aaKnown RBP18.95■□□□□ 0.62
SCAP-206ENST00000428413 TMPOP42166 694 aaKnown RBP18.95■□□□□ 0.62
SCAP-206ENST00000428413 TAOK2Q9UL54 1235 aa18.95■□□□□ 0.62
SCAP-206ENST00000428413 ADGRL2O95490 1459 aa18.94■□□□□ 0.62
SCAP-206ENST00000428413 ZMYND15Q9H091 742 aa18.94■□□□□ 0.62
SCAP-206ENST00000428413 FANCAO15360 1455 aa18.94■□□□□ 0.62
SCAP-206ENST00000428413 PLCH2O75038 1416 aa18.94■□□□□ 0.62
SCAP-206ENST00000428413 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
SCAP-206ENST00000428413 KDM5CP41229 1560 aa18.93■□□□□ 0.62
SCAP-206ENST00000428413 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
SCAP-206ENST00000428413 UGGT1Q9NYU2 1555 aa18.92■□□□□ 0.62
SCAP-206ENST00000428413 NME9Q86XW9 330 aa18.92■□□□□ 0.62
SCAP-206ENST00000428413 SCAF11Q99590 1463 aaKnown RBP18.92■□□□□ 0.62
SCAP-206ENST00000428413 TRHP20396 242 aaPredicted RBP18.92■□□□□ 0.62
SCAP-206ENST00000428413 PDE3AQ14432 1141 aa18.91■□□□□ 0.62
SCAP-206ENST00000428413 C22orf23Q9BZE7 217 aa18.91■□□□□ 0.62
SCAP-206ENST00000428413 TRIM27P14373 513 aa18.9■□□□□ 0.62
SCAP-206ENST00000428413 ARHGEF12Q9NZN5 1544 aa18.9■□□□□ 0.62
SCAP-206ENST00000428413 COL17A1Q9UMD9 1497 aaPredicted RBP18.9■□□□□ 0.62
SCAP-206ENST00000428413 COG3Q96JB2 828 aa18.89■□□□□ 0.61
SCAP-206ENST00000428413 NGDNQ8NEJ9 315 aaKnown RBP18.89■□□□□ 0.61
SCAP-206ENST00000428413 MVPQ14764 893 aaKnown RBP18.88■□□□□ 0.61
SCAP-206ENST00000428413 C14orf93Q9H972 538 aaKnown RBP18.88■□□□□ 0.61
SCAP-206ENST00000428413 KRT24Q2M2I5 525 aa18.88■□□□□ 0.61
SCAP-206ENST00000428413 A0A0U1RQG5 324 aaPredicted RBP18.87■□□□□ 0.61
SCAP-206ENST00000428413 DDX19BQ9UMR2 479 aa18.87■□□□□ 0.61
SCAP-206ENST00000428413 NKTRP30414 1462 aaKnown RBP18.87■□□□□ 0.61
SCAP-206ENST00000428413 ATF7IPQ6VMQ6 1270 aa18.87■□□□□ 0.61
SCAP-206ENST00000428413 FYB1O15117 783 aa18.86■□□□□ 0.61
SCAP-206ENST00000428413 USP35Q9P2H5 1018 aa18.86■□□□□ 0.61
SCAP-206ENST00000428413 SULT6B1Q6IMI4 303 aa18.86■□□□□ 0.61
SCAP-206ENST00000428413 SAMD9LQ8IVG5 1584 aa18.86■□□□□ 0.61
SCAP-206ENST00000428413 MCM10Q7L590 875 aa18.85■□□□□ 0.61
SCAP-206ENST00000428413 RTF1Q92541 710 aaKnown RBP18.85■□□□□ 0.61
SCAP-206ENST00000428413 GPRASP1Q5JY77 1395 aa18.85■□□□□ 0.61
SCAP-206ENST00000428413 CEBPAP49715 358 aaPredicted RBP18.85■□□□□ 0.61
SCAP-206ENST00000428413 CD109Q6YHK3 1445 aa18.85■□□□□ 0.61
SCAP-206ENST00000428413 PHACTR3Q96KR7 559 aa18.85■□□□□ 0.61
SCAP-206ENST00000428413 NAP1L5Q96NT1 182 aaPredicted RBP18.84■□□□□ 0.61
SCAP-206ENST00000428413 AMPHP49418 695 aa18.84■□□□□ 0.61
SCAP-206ENST00000428413 TSPYL6Q8N831 410 aa18.84■□□□□ 0.61
SCAP-206ENST00000428413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.84■□□□□ 0.613e-6■■■□□ 15.3
SCAP-206ENST00000428413 EIF2S2P20042 333 aaKnown RBP18.82■□□□□ 0.6
SCAP-206ENST00000428413 PNNQ9H307 717 aaKnown RBP18.82■□□□□ 0.6
SCAP-206ENST00000428413 A0A0G2JS52 829 aa18.82■□□□□ 0.6
SCAP-206ENST00000428413 TTC37Q6PGP7 1564 aa18.81■□□□□ 0.6
SCAP-206ENST00000428413 TRIM6-TRIM34B2RNG4 842 aa18.81■□□□□ 0.6
SCAP-206ENST00000428413 KDM2BQ8NHM5 1336 aa18.81■□□□□ 0.6
SCAP-206ENST00000428413 TWISTNBQ3B726 338 aaPredicted RBP18.81■□□□□ 0.6
SCAP-206ENST00000428413 ARID3AQ99856 593 aa18.81■□□□□ 0.6
SCAP-206ENST00000428413 SMARCA5O60264 1052 aaPredicted RBP18.81■□□□□ 0.6
SCAP-206ENST00000428413 WDR63Q8IWG1 891 aa18.81■□□□□ 0.6
SCAP-206ENST00000428413 TBC1D2Q9BYX2 928 aa18.81■□□□□ 0.6
SCAP-206ENST00000428413 STAC3Q96MF2 364 aa18.8■□□□□ 0.6
SCAP-206ENST00000428413 ATAD2Q6PL18 1390 aa18.79■□□□□ 0.6
SCAP-206ENST00000428413 PLCB2Q00722 1185 aa18.79■□□□□ 0.6
SCAP-206ENST00000428413 HSP90AA2PQ14568 343 aaPredicted RBP18.79■□□□□ 0.6
SCAP-206ENST00000428413 RILPL2Q969X0 211 aa18.79■□□□□ 0.6
SCAP-206ENST00000428413 TRIM44Q96DX7 344 aaPredicted RBP18.79■□□□□ 0.6
SCAP-206ENST00000428413 SHANK2Q9UPX8 1470 aa18.79■□□□□ 0.6
SCAP-206ENST00000428413 ASXL2Q76L83 1435 aa18.79■□□□□ 0.6
SCAP-206ENST00000428413 CCDC9Q9Y3X0 531 aaKnown RBP18.79■□□□□ 0.6
SCAP-206ENST00000428413 RBM42Q9BTD8 480 aaKnown RBP18.78■□□□□ 0.6
SCAP-206ENST00000428413 ASXL1Q8IXJ9 1541 aa18.78■□□□□ 0.6
SCAP-206ENST00000428413 TSHZ3Q63HK5 1081 aa18.78■□□□□ 0.6
SCAP-206ENST00000428413 AEBP1Q8IUX7 1158 aa18.78■□□□□ 0.6
SCAP-206ENST00000428413 ABCA8O94911 1581 aa18.78■□□□□ 0.6
SCAP-206ENST00000428413 DUOX2Q9NRD8 1548 aa18.78■□□□□ 0.6
SCAP-206ENST00000428413 CDC42BPAQ5VT25 1732 aa18.77■□□□□ 0.6
SCAP-206ENST00000428413 F6X3S4 739 aa18.77■□□□□ 0.59
SCAP-206ENST00000428413 OS9Q13438 667 aaPredicted RBP18.77■□□□□ 0.59
SCAP-206ENST00000428413 WDR7Q9Y4E6 1490 aa18.76■□□□□ 0.59
SCAP-206ENST00000428413 GOLGA6L3A6NEY3 463 aa18.75■□□□□ 0.59
SCAP-206ENST00000428413 DTNBO60941 627 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms