RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 DCAF11Q8TEB1 546 aa28.08■■■□□ 2.09
COL9A2-204ENST00000427563 DDX17Q92841 729 aaKnown RBP28.08■■■□□ 2.09
COL9A2-204ENST00000427563 RGS17Q9UGC6 210 aaPredicted RBP28.07■■■□□ 2.08
COL9A2-204ENST00000427563 KDM2AQ9Y2K7 1162 aa28.07■■■□□ 2.08
COL9A2-204ENST00000427563 ORAI2Q96SN7 254 aa28.05■■■□□ 2.08
COL9A2-204ENST00000427563 LRP6O75581 1613 aa28.04■■■□□ 2.08
COL9A2-204ENST00000427563 FMN2Q9NZ56 1722 aa28.03■■■□□ 2.08
COL9A2-204ENST00000427563 SIRT1Q96EB6 747 aa28.02■■■□□ 2.08
COL9A2-204ENST00000427563 PHF23Q9BUL5 403 aaPredicted RBP28.02■■■□□ 2.08
COL9A2-204ENST00000427563 DLC1Q96QB1 1528 aa28.01■■■□□ 2.07
COL9A2-204ENST00000427563 STAC3Q96MF2 364 aa27.96■■■□□ 2.07
COL9A2-204ENST00000427563 RGPD8O14715 1765 aaPredicted RBP27.96■■■□□ 2.07
COL9A2-204ENST00000427563 PRAM1Q96QH2 718 aa27.95■■■□□ 2.06
COL9A2-204ENST00000427563 SPATA31A6Q5VVP1 1343 aa27.94■■■□□ 2.06
COL9A2-204ENST00000427563 NUTM2FA1L443 756 aa27.93■■■□□ 2.06
COL9A2-204ENST00000427563 SOS2Q07890 1332 aaPredicted RBP27.92■■■□□ 2.06
COL9A2-204ENST00000427563 PNPLA6Q8IY17 1366 aa27.92■■■□□ 2.06
COL9A2-204ENST00000427563 ARHGEF28Q8N1W1 1705 aaKnown RBP27.92■■■□□ 2.06
COL9A2-204ENST00000427563 SAFB2Q14151 953 aaKnown RBP eCLIP27.91■■■□□ 2.06
COL9A2-204ENST00000427563 TRAK1Q9UPV9 953 aa27.91■■■□□ 2.06
COL9A2-204ENST00000427563 KIAA1210Q9ULL0 1709 aa27.91■■■□□ 2.06
COL9A2-204ENST00000427563 ADGRB2O60241 1585 aa27.9■■■□□ 2.06
COL9A2-204ENST00000427563 ESCO1Q5FWF5 840 aa27.9■■■□□ 2.06
COL9A2-204ENST00000427563 PXDNQ92626 1479 aa27.89■■■□□ 2.06
COL9A2-204ENST00000427563 POTEAQ6S8J7 498 aa27.89■■■□□ 2.06
COL9A2-204ENST00000427563 LRRC59Q96AG4 307 aaKnown RBP27.89■■■□□ 2.06
COL9A2-204ENST00000427563 SIN3AQ96ST3 1273 aa27.89■■■□□ 2.06
COL9A2-204ENST00000427563 USP32Q8NFA0 1604 aa27.89■■■□□ 2.05
COL9A2-204ENST00000427563 KIF1AQ12756 1690 aa27.84■■■□□ 2.05
COL9A2-204ENST00000427563 POGKQ9P215 609 aa27.84■■■□□ 2.05
COL9A2-204ENST00000427563 COL22A1Q8NFW1 1626 aaPredicted RBP27.83■■■□□ 2.05
COL9A2-204ENST00000427563 NUTM2BA6NNL0 878 aaPredicted RBP27.83■■■□□ 2.05
COL9A2-204ENST00000427563 NUTM2EB1AL46 878 aaPredicted RBP27.83■■■□□ 2.05
COL9A2-204ENST00000427563 NUTM2AQ8IVF1 878 aaPredicted RBP27.83■■■□□ 2.05
COL9A2-204ENST00000427563 FOXO3O43524 673 aa27.82■■■□□ 2.04
COL9A2-204ENST00000427563 TRIM26Q12899 539 aaPredicted RBP27.82■■■□□ 2.04
COL9A2-204ENST00000427563 XPCQ01831 940 aaPredicted RBP27.81■■■□□ 2.04
COL9A2-204ENST00000427563 NBPF1Q3BBV0 1214 aa27.81■■■□□ 2.04
COL9A2-204ENST00000427563 L3MBTL2Q969R5 705 aa27.81■■■□□ 2.04
COL9A2-204ENST00000427563 NPHP3Q7Z494 1330 aa27.81■■■□□ 2.04
COL9A2-204ENST00000427563 HIRIP3Q9BW71 556 aaPredicted RBP27.8■■■□□ 2.04
COL9A2-204ENST00000427563 MINK1Q8N4C8 1332 aaPredicted RBP27.79■■■□□ 2.04
COL9A2-204ENST00000427563 MEX3CQ5U5Q3 659 aaKnown RBP27.77■■■□□ 2.04
COL9A2-204ENST00000427563 ANKARQ7Z5J8 1434 aa27.75■■■□□ 2.03
COL9A2-204ENST00000427563 PRR36Q9H6K5 1346 aa27.75■■■□□ 2.03
COL9A2-204ENST00000427563 NEUROD1Q13562 356 aa27.75■■■□□ 2.03
COL9A2-204ENST00000427563 TRPM1Q7Z4N2 1603 aa27.74■■■□□ 2.03
COL9A2-204ENST00000427563 TULP4Q9NRJ4 1543 aa27.73■■■□□ 2.03
COL9A2-204ENST00000427563 PHF8Q9UPP1 1060 aa27.73■■■□□ 2.03
COL9A2-204ENST00000427563 WASLO00401 505 aaPredicted RBP27.71■■■□□ 2.03
COL9A2-204ENST00000427563 AFF2P51816 1311 aa27.68■■■□□ 2.02
COL9A2-204ENST00000427563 KRT28Q7Z3Y7 464 aa27.68■■■□□ 2.02
COL9A2-204ENST00000427563 SPATA31A3Q5VYP0 1347 aa27.67■■■□□ 2.02
COL9A2-204ENST00000427563 TRPM3Q9HCF6 1732 aaPredicted RBP27.67■■■□□ 2.02
COL9A2-204ENST00000427563 MARF1Q9Y4F3 1742 aaKnown RBP27.67■■■□□ 2.02
COL9A2-204ENST00000427563 PMFBP1Q8TBY8 1022 aa27.67■■■□□ 2.02
COL9A2-204ENST00000427563 ATP7BP35670 1465 aa27.67■■■□□ 2.02
COL9A2-204ENST00000427563 ADAMTS2O95450 1211 aa27.66■■■□□ 2.02
COL9A2-204ENST00000427563 C8orf37Q96NL8 207 aa27.66■■■□□ 2.02
COL9A2-204ENST00000427563 ZNF772Q68DY9 489 aaPredicted RBP27.65■■■□□ 2.02
COL9A2-204ENST00000427563 TOPAZ1Q8N9V7 1692 aa27.63■■■□□ 2.01
COL9A2-204ENST00000427563 NBPF8Q3BBV2 869 aa27.63■■■□□ 2.01
COL9A2-204ENST00000427563 TNS3Q68CZ2 1445 aa27.63■■■□□ 2.01
COL9A2-204ENST00000427563 QRICH2Q9H0J4 1663 aa27.62■■■□□ 2.01
COL9A2-204ENST00000427563 EIF3AQ14152 1382 aaKnown RBP27.62■■■□□ 2.01
COL9A2-204ENST00000427563 ITSN1Q15811 1721 aa27.62■■■□□ 2.01
COL9A2-204ENST00000427563 ABCA3Q99758 1704 aa27.61■■■□□ 2.01
COL9A2-204ENST00000427563 SBNO1A3KN83 1393 aa27.6■■■□□ 2.01
COL9A2-204ENST00000427563 ALS2Q96Q42 1657 aa27.59■■■□□ 2.01
COL9A2-204ENST00000427563 CDK19Q9BWU1 502 aa27.59■■■□□ 2.01
COL9A2-204ENST00000427563 NUDT16Q96DE0 195 aaKnown RBP27.58■■■□□ 2.01
COL9A2-204ENST00000427563 CENPJQ9HC77 1338 aaPredicted RBP27.57■■■□□ 2
COL9A2-204ENST00000427563 PSME1Q06323 249 aa27.56■■■□□ 2
COL9A2-204ENST00000427563 NGLY1Q96IV0 654 aa27.56■■■□□ 2
COL9A2-204ENST00000427563 FNBP4Q8N3X1 1017 aaPredicted RBP27.54■■■□□ 2
COL9A2-204ENST00000427563 ROCK2O75116 1388 aaKnown RBP27.53■■■□□ 2
COL9A2-204ENST00000427563 CABLES1Q8TDN4 633 aa27.53■■■□□ 2
COL9A2-204ENST00000427563 GPRASP1Q5JY77 1395 aa27.52■■■□□ 2
COL9A2-204ENST00000427563 CRYBG1Q9Y4K1 1723 aa27.52■■■□□ 2
COL9A2-204ENST00000427563 BCL9LQ86UU0 1499 aa27.51■■■□□ 2
COL9A2-204ENST00000427563 RXRBP28702 533 aa27.51■■□□□ 1.99
COL9A2-204ENST00000427563 QTRT2Q9H974 415 aaKnown RBP27.51■■□□□ 1.99
COL9A2-204ENST00000427563 ARHGEF10O15013 1369 aa27.49■■□□□ 1.99
COL9A2-204ENST00000427563 USP21Q9UK80 565 aa27.49■■□□□ 1.99
COL9A2-204ENST00000427563 CDK12Q9NYV4 1490 aaPredicted RBP27.49■■□□□ 1.99
COL9A2-204ENST00000427563 ATRNO75882 1429 aa27.49■■□□□ 1.99
COL9A2-204ENST00000427563 POLR3AO14802 1390 aaPredicted RBP27.48■■□□□ 1.99
COL9A2-204ENST00000427563 TONSLQ96HA7 1378 aa27.48■■□□□ 1.99
COL9A2-204ENST00000427563 NGDNQ8NEJ9 315 aaKnown RBP27.48■■□□□ 1.99
COL9A2-204ENST00000427563 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.47■■□□□ 1.99
COL9A2-204ENST00000427563 RGS12O14924 1447 aa27.47■■□□□ 1.99
COL9A2-204ENST00000427563 SLIT2O94813 1529 aa27.46■■□□□ 1.99
COL9A2-204ENST00000427563 RALGAPBQ86X10 1494 aa27.46■■□□□ 1.99
COL9A2-204ENST00000427563 PLEKHG5O94827 1062 aa27.46■■□□□ 1.99
COL9A2-204ENST00000427563 LMOD2Q6P5Q4 547 aa27.46■■□□□ 1.99
COL9A2-204ENST00000427563 CABP2Q9NPB3 220 aa27.46■■□□□ 1.99
COL9A2-204ENST00000427563 CCDC61Q9Y6R9 512 aa27.46■■□□□ 1.99
COL9A2-204ENST00000427563 PLEKHG3A1L390 1219 aa27.45■■□□□ 1.98
COL9A2-204ENST00000427563 PLCH1Q4KWH8 1693 aa27.45■■□□□ 1.98
COL9A2-204ENST00000427563 ACEP12821 1306 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms