RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 POGKQ9P215 609 aa23.67■■□□□ 1.38
CHEK1-202ENST00000427383 EVC2Q86UK5 1308 aa23.66■■□□□ 1.38
CHEK1-202ENST00000427383 SAFB2Q14151 953 aaKnown RBP eCLIP23.66■■□□□ 1.38
CHEK1-202ENST00000427383 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.65■■□□□ 1.38
CHEK1-202ENST00000427383 WAPLQ7Z5K2 1190 aa23.65■■□□□ 1.38
CHEK1-202ENST00000427383 MINK1Q8N4C8 1332 aaPredicted RBP23.62■■□□□ 1.37
CHEK1-202ENST00000427383 ANP32CO43423 234 aa23.62■■□□□ 1.37
CHEK1-202ENST00000427383 NWD1Q149M9 1564 aa23.62■■□□□ 1.37
CHEK1-202ENST00000427383 NCKAP5LQ9HCH0 1330 aa23.61■■□□□ 1.37
CHEK1-202ENST00000427383 AMOTL2Q9Y2J4 779 aa23.61■■□□□ 1.37
CHEK1-202ENST00000427383 PER1O15534 1290 aaPredicted RBP23.6■■□□□ 1.37
CHEK1-202ENST00000427383 STRCQ7RTU9 1775 aa23.59■■□□□ 1.37
CHEK1-202ENST00000427383 PANK3Q9H999 370 aa23.58■■□□□ 1.37
CHEK1-202ENST00000427383 ATAD2Q6PL18 1390 aa23.56■■□□□ 1.36
CHEK1-202ENST00000427383 PRKRIP1Q9H875 184 aaPredicted RBP23.56■■□□□ 1.36
CHEK1-202ENST00000427383 NINLQ9Y2I6 1382 aa23.55■■□□□ 1.36
CHEK1-202ENST00000427383 HSPA2P54652 639 aa23.55■■□□□ 1.36
CHEK1-202ENST00000427383 CABP2Q9NPB3 220 aa23.55■■□□□ 1.36
CHEK1-202ENST00000427383 KCNA6P17658 529 aa23.54■■□□□ 1.36
CHEK1-202ENST00000427383 CDK19Q9BWU1 502 aa23.53■■□□□ 1.36
CHEK1-202ENST00000427383 NALCNQ8IZF0 1738 aa23.52■■□□□ 1.36
CHEK1-202ENST00000427383 USP32Q8NFA0 1604 aa23.52■■□□□ 1.36
CHEK1-202ENST00000427383 TOPAZ1Q8N9V7 1692 aa23.52■■□□□ 1.36
CHEK1-202ENST00000427383 WASLO00401 505 aaPredicted RBP23.51■■□□□ 1.35
CHEK1-202ENST00000427383 SRPK2P78362 688 aaKnown RBP23.51■■□□□ 1.35
CHEK1-202ENST00000427383 ATP7BP35670 1465 aa23.51■■□□□ 1.35
CHEK1-202ENST00000427383 CCER2I3L3R5 266 aa23.5■■□□□ 1.35
CHEK1-202ENST00000427383 CD163L1Q9NR16 1453 aa23.5■■□□□ 1.35
CHEK1-202ENST00000427383 SLC12A5Q9H2X9 1139 aa23.49■■□□□ 1.35
CHEK1-202ENST00000427383 KTN1Q86UP2 1357 aaKnown RBP23.49■■□□□ 1.35
CHEK1-202ENST00000427383 ANKRD36BQ8N2N9 1353 aa23.49■■□□□ 1.35
CHEK1-202ENST00000427383 STRCP1A6NGW2 1772 aa23.48■■□□□ 1.35
CHEK1-202ENST00000427383 NKTRP30414 1462 aaKnown RBP23.48■■□□□ 1.35
CHEK1-202ENST00000427383 PARD3Q8TEW0 1356 aa23.48■■□□□ 1.35
CHEK1-202ENST00000427383 CDC42BPGQ6DT37 1551 aa23.47■■□□□ 1.35
CHEK1-202ENST00000427383 NPC1L1Q9UHC9 1359 aa23.47■■□□□ 1.35
CHEK1-202ENST00000427383 AMER1Q5JTC6 1135 aaPredicted RBP23.46■■□□□ 1.35
CHEK1-202ENST00000427383 CARD14Q9BXL6 1004 aa23.46■■□□□ 1.35
CHEK1-202ENST00000427383 TMC1Q8TDI8 760 aa23.45■■□□□ 1.34
CHEK1-202ENST00000427383 FMN2Q9NZ56 1722 aa23.45■■□□□ 1.34
CHEK1-202ENST00000427383 A0A1W2PP64 1363 aa23.45■■□□□ 1.34
CHEK1-202ENST00000427383 ITSN1Q15811 1721 aa23.43■■□□□ 1.34
CHEK1-202ENST00000427383 KNSTRNQ9Y448 316 aa23.43■■□□□ 1.34
CHEK1-202ENST00000427383 NSD3Q9BZ95 1437 aa23.43■■□□□ 1.34
CHEK1-202ENST00000427383 PRR36Q9H6K5 1346 aa23.42■■□□□ 1.34
CHEK1-202ENST00000427383 ADGRL3Q9HAR2 1447 aa23.42■■□□□ 1.34
CHEK1-202ENST00000427383 AKAP12Q02952 1782 aa23.41■■□□□ 1.34
CHEK1-202ENST00000427383 PPIP5K1Q6PFW1 1433 aa23.41■■□□□ 1.34
CHEK1-202ENST00000427383 RALBP1Q15311 655 aa23.41■■□□□ 1.34
CHEK1-202ENST00000427383 MON2Q7Z3U7 1717 aa23.41■■□□□ 1.34
CHEK1-202ENST00000427383 CPSF1Q10570 1443 aaKnown RBP23.39■■□□□ 1.34
CHEK1-202ENST00000427383 NUDT16Q96DE0 195 aaKnown RBP23.39■■□□□ 1.34
CHEK1-202ENST00000427383 RGPD8O14715 1765 aaPredicted RBP23.39■■□□□ 1.33
CHEK1-202ENST00000427383 CABP1Q9NZU7 370 aa23.38■■□□□ 1.33
CHEK1-202ENST00000427383 ANKARQ7Z5J8 1434 aa23.37■■□□□ 1.33
CHEK1-202ENST00000427383 CCDC61Q9Y6R9 512 aa23.37■■□□□ 1.33
CHEK1-202ENST00000427383 CC2D1BQ5T0F9 858 aaKnown RBP23.36■■□□□ 1.33
CHEK1-202ENST00000427383 TERF2IPQ9NYB0 399 aa23.36■■□□□ 1.33
CHEK1-202ENST00000427383 ANKRD26Q9UPS8 1709 aa23.35■■□□□ 1.33
CHEK1-202ENST00000427383 MYBBP1AQ9BQG0 1328 aaKnown RBP23.35■■□□□ 1.33
CHEK1-202ENST00000427383 NRKQ7Z2Y5 1582 aa23.35■■□□□ 1.33
CHEK1-202ENST00000427383 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
CHEK1-202ENST00000427383 KIF20BQ96Q89 1820 aa23.34■■□□□ 1.33
CHEK1-202ENST00000427383 CCDC184Q52MB2 194 aa23.33■■□□□ 1.33
CHEK1-202ENST00000427383 XIRP1Q702N8 1843 aaKnown RBP23.32■■□□□ 1.32
CHEK1-202ENST00000427383 NSD2O96028 1365 aa23.32■■□□□ 1.32
CHEK1-202ENST00000427383 CGNL1Q0VF96 1302 aa23.31■■□□□ 1.32
CHEK1-202ENST00000427383 NCOA3Q9Y6Q9 1424 aa23.31■■□□□ 1.32
CHEK1-202ENST00000427383 HDGFL2Q7Z4V5 671 aaPredicted RBP23.31■■□□□ 1.32
CHEK1-202ENST00000427383 RBM33Q96EV2 1170 aaKnown RBP23.3■■□□□ 1.32
CHEK1-202ENST00000427383 PLEKHG3A1L390 1219 aa23.29■■□□□ 1.32
CHEK1-202ENST00000427383 BRD4O60885 1362 aaPredicted RBP23.29■■□□□ 1.32
CHEK1-202ENST00000427383 EDC4Q6P2E9 1401 aaKnown RBP23.29■■□□□ 1.32
CHEK1-202ENST00000427383 POLR3AO14802 1390 aaPredicted RBP23.27■■□□□ 1.32
CHEK1-202ENST00000427383 NLRP13Q86W25 1043 aa23.27■■□□□ 1.32
CHEK1-202ENST00000427383 PROSER2Q86WR7 435 aaPredicted RBP23.27■■□□□ 1.32
CHEK1-202ENST00000427383 TMEM94Q12767 1356 aa23.26■■□□□ 1.31
CHEK1-202ENST00000427383 NUTM2FA1L443 756 aa23.26■■□□□ 1.31
CHEK1-202ENST00000427383 MRS2Q9HD23 443 aa23.26■■□□□ 1.31
CHEK1-202ENST00000427383 DCCP43146 1447 aa23.26■■□□□ 1.31
CHEK1-202ENST00000427383 USP6P35125 1406 aa23.24■■□□□ 1.31
CHEK1-202ENST00000427383 LRRC7Q96NW7 1537 aa23.24■■□□□ 1.31
CHEK1-202ENST00000427383 SSH2Q76I76 1423 aa23.23■■□□□ 1.31
CHEK1-202ENST00000427383 ACEP12821 1306 aa23.23■■□□□ 1.31
CHEK1-202ENST00000427383 PPP2R1AP30153 589 aa23.22■■□□□ 1.31
CHEK1-202ENST00000427383 ZNF692Q9BU19 519 aaPredicted RBP23.22■■□□□ 1.31
CHEK1-202ENST00000427383 ZNF335Q9H4Z2 1342 aaPredicted RBP23.21■■□□□ 1.31
CHEK1-202ENST00000427383 FYB1O15117 783 aa23.21■■□□□ 1.31
CHEK1-202ENST00000427383 DMRT2Q9Y5R5 561 aa23.21■■□□□ 1.31
CHEK1-202ENST00000427383 C19orf44Q9H6X5 657 aa23.2■■□□□ 1.3
CHEK1-202ENST00000427383 C14orf37Q86TY3 774 aa23.19■■□□□ 1.3
CHEK1-202ENST00000427383 YTHDC1Q96MU7 727 aaKnown RBP23.19■■□□□ 1.3
CHEK1-202ENST00000427383 KIF1AQ12756 1690 aa23.17■■□□□ 1.3
CHEK1-202ENST00000427383 MST1RQ04912 1400 aa23.16■■□□□ 1.3
CHEK1-202ENST00000427383 MORC1Q86VD1 984 aa23.16■■□□□ 1.3
CHEK1-202ENST00000427383 PMFBP1Q8TBY8 1022 aa23.16■■□□□ 1.3
CHEK1-202ENST00000427383 PNISRQ8TF01 805 aaKnown RBP23.16■■□□□ 1.3
CHEK1-202ENST00000427383 GGNBP2Q9H3C7 697 aa23.16■■□□□ 1.3
CHEK1-202ENST00000427383 C1orf167Q5SNV9 1468 aa23.15■■□□□ 1.3
CHEK1-202ENST00000427383 PIK3C2AO00443 1686 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms