RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 CDC42BPGQ6DT37 1551 aa19.87■□□□□ 0.77
SNX3-204ENST00000426155 WAPLQ7Z5K2 1190 aa19.86■□□□□ 0.77
SNX3-204ENST00000426155 ABCC11Q96J66 1382 aa19.85■□□□□ 0.77
SNX3-204ENST00000426155 BRINP3Q76B58 766 aa19.83■□□□□ 0.77
SNX3-204ENST00000426155 SIN3AQ96ST3 1273 aa19.83■□□□□ 0.77
SNX3-204ENST00000426155 ARHGEF28Q8N1W1 1705 aaKnown RBP19.82■□□□□ 0.76
SNX3-204ENST00000426155 FMN2Q9NZ56 1722 aa19.82■□□□□ 0.76
SNX3-204ENST00000426155 C1orf167Q5SNV9 1468 aa19.82■□□□□ 0.76
SNX3-204ENST00000426155 KIAA1210Q9ULL0 1709 aa19.82■□□□□ 0.76
SNX3-204ENST00000426155 DLC1Q96QB1 1528 aa19.81■□□□□ 0.76
SNX3-204ENST00000426155 RGPD8O14715 1765 aaPredicted RBP19.8■□□□□ 0.76
SNX3-204ENST00000426155 NEUROD1Q13562 356 aa19.78■□□□□ 0.76
SNX3-204ENST00000426155 DDX17Q92841 729 aaKnown RBP19.78■□□□□ 0.76
SNX3-204ENST00000426155 SHPRHQ149N8 1683 aa19.78■□□□□ 0.76
SNX3-204ENST00000426155 SAFB2Q14151 953 aaKnown RBP eCLIP19.77■□□□□ 0.76
SNX3-204ENST00000426155 PRAM1Q96QH2 718 aa19.76■□□□□ 0.75
SNX3-204ENST00000426155 ORAI2Q96SN7 254 aa19.76■□□□□ 0.75
SNX3-204ENST00000426155 TRAK1Q9UPV9 953 aa19.76■□□□□ 0.75
SNX3-204ENST00000426155 NUTM2FA1L443 756 aa19.75■□□□□ 0.75
SNX3-204ENST00000426155 STAC3Q96MF2 364 aa19.75■□□□□ 0.75
SNX3-204ENST00000426155 ADGRB2O60241 1585 aa19.74■□□□□ 0.75
SNX3-204ENST00000426155 L3MBTL2Q969R5 705 aa19.74■□□□□ 0.75
SNX3-204ENST00000426155 TRPM1Q7Z4N2 1603 aa19.73■□□□□ 0.75
SNX3-204ENST00000426155 USP32Q8NFA0 1604 aa19.73■□□□□ 0.75
SNX3-204ENST00000426155 JCADQ9P266 1359 aa19.72■□□□□ 0.75
SNX3-204ENST00000426155 SIRT1Q96EB6 747 aa19.72■□□□□ 0.75
SNX3-204ENST00000426155 LRP6O75581 1613 aa19.7■□□□□ 0.74
SNX3-204ENST00000426155 NBPF1Q3BBV0 1214 aa19.7■□□□□ 0.74
SNX3-204ENST00000426155 ILDR2Q71H61 639 aa19.7■□□□□ 0.74
SNX3-204ENST00000426155 POGKQ9P215 609 aa19.7■□□□□ 0.74
SNX3-204ENST00000426155 KIF1AQ12756 1690 aa19.69■□□□□ 0.74
SNX3-204ENST00000426155 HIRIP3Q9BW71 556 aaPredicted RBP19.68■□□□□ 0.74
SNX3-204ENST00000426155 ESCO1Q5FWF5 840 aa19.67■□□□□ 0.74
SNX3-204ENST00000426155 MINK1Q8N4C8 1332 aaPredicted RBP19.67■□□□□ 0.74
SNX3-204ENST00000426155 PXDNQ92626 1479 aa19.66■□□□□ 0.74
SNX3-204ENST00000426155 QRICH2Q9H0J4 1663 aa19.65■□□□□ 0.74
SNX3-204ENST00000426155 PCGF6Q9BYE7 350 aa19.65■□□□□ 0.74
SNX3-204ENST00000426155 PPP4R3CPQ6ZMV5 832 aa19.64■□□□□ 0.73
SNX3-204ENST00000426155 PNPLA6Q8IY17 1366 aa19.63■□□□□ 0.73
SNX3-204ENST00000426155 XPCQ01831 940 aaPredicted RBP19.63■□□□□ 0.73
SNX3-204ENST00000426155 TULP4Q9NRJ4 1543 aa19.62■□□□□ 0.73
SNX3-204ENST00000426155 SOS2Q07890 1332 aaPredicted RBP19.62■□□□□ 0.73
SNX3-204ENST00000426155 FOXO3O43524 673 aa19.61■□□□□ 0.73
SNX3-204ENST00000426155 RGS17Q9UGC6 210 aaPredicted RBP19.61■□□□□ 0.73
SNX3-204ENST00000426155 COL22A1Q8NFW1 1626 aaPredicted RBP19.61■□□□□ 0.73
SNX3-204ENST00000426155 TONSLQ96HA7 1378 aa19.6■□□□□ 0.73
SNX3-204ENST00000426155 ITSN1Q15811 1721 aa19.6■□□□□ 0.73
SNX3-204ENST00000426155 SPATA31A6Q5VVP1 1343 aa19.6■□□□□ 0.73
SNX3-204ENST00000426155 NBPF8Q3BBV2 869 aa19.6■□□□□ 0.73
SNX3-204ENST00000426155 LRRC59Q96AG4 307 aaKnown RBP19.6■□□□□ 0.73
SNX3-204ENST00000426155 ANKARQ7Z5J8 1434 aa19.59■□□□□ 0.73
SNX3-204ENST00000426155 NPHP3Q7Z494 1330 aa19.59■□□□□ 0.73
SNX3-204ENST00000426155 PRR36Q9H6K5 1346 aa19.59■□□□□ 0.73
SNX3-204ENST00000426155 NUTM2BA6NNL0 878 aaPredicted RBP19.59■□□□□ 0.73
SNX3-204ENST00000426155 NUTM2EB1AL46 878 aaPredicted RBP19.59■□□□□ 0.73
SNX3-204ENST00000426155 NUTM2AQ8IVF1 878 aaPredicted RBP19.59■□□□□ 0.73
SNX3-204ENST00000426155 TOPAZ1Q8N9V7 1692 aa19.59■□□□□ 0.73
SNX3-204ENST00000426155 ATP7BP35670 1465 aa19.57■□□□□ 0.72
SNX3-204ENST00000426155 ROCK2O75116 1388 aaKnown RBP19.57■□□□□ 0.72
SNX3-204ENST00000426155 WASLO00401 505 aaPredicted RBP19.56■□□□□ 0.72
SNX3-204ENST00000426155 PHF8Q9UPP1 1060 aa19.56■□□□□ 0.72
SNX3-204ENST00000426155 PMFBP1Q8TBY8 1022 aa19.55■□□□□ 0.72
SNX3-204ENST00000426155 TRPM3Q9HCF6 1732 aaPredicted RBP19.55■□□□□ 0.72
SNX3-204ENST00000426155 MEX3CQ5U5Q3 659 aaKnown RBP19.54■□□□□ 0.72
SNX3-204ENST00000426155 RALGAPBQ86X10 1494 aa19.54■□□□□ 0.72
SNX3-204ENST00000426155 ABCA3Q99758 1704 aa19.54■□□□□ 0.72
SNX3-204ENST00000426155 MARF1Q9Y4F3 1742 aaKnown RBP19.54■□□□□ 0.72
SNX3-204ENST00000426155 CENPJQ9HC77 1338 aaPredicted RBP19.53■□□□□ 0.72
SNX3-204ENST00000426155 EIF3AQ14152 1382 aaKnown RBP19.53■□□□□ 0.72
SNX3-204ENST00000426155 POTEAQ6S8J7 498 aa19.51■□□□□ 0.71
SNX3-204ENST00000426155 KRT28Q7Z3Y7 464 aa19.51■□□□□ 0.71
SNX3-204ENST00000426155 CDK19Q9BWU1 502 aa19.51■□□□□ 0.71
SNX3-204ENST00000426155 GPRASP1Q5JY77 1395 aa19.5■□□□□ 0.71
SNX3-204ENST00000426155 TNS3Q68CZ2 1445 aa19.5■□□□□ 0.71
SNX3-204ENST00000426155 ALS2Q96Q42 1657 aa19.49■□□□□ 0.71
SNX3-204ENST00000426155 SPATA31A3Q5VYP0 1347 aa19.49■□□□□ 0.71
SNX3-204ENST00000426155 ADAMTS2O95450 1211 aa19.48■□□□□ 0.71
SNX3-204ENST00000426155 NUDT16Q96DE0 195 aaKnown RBP19.48■□□□□ 0.71
SNX3-204ENST00000426155 C8orf37Q96NL8 207 aa19.46■□□□□ 0.71
SNX3-204ENST00000426155 PLEKHG5O94827 1062 aa19.45■□□□□ 0.7
SNX3-204ENST00000426155 PSME1Q06323 249 aa19.45■□□□□ 0.7
SNX3-204ENST00000426155 AFF2P51816 1311 aa19.45■□□□□ 0.7
SNX3-204ENST00000426155 CRYBG1Q9Y4K1 1723 aa19.45■□□□□ 0.7
SNX3-204ENST00000426155 SRPK2P78362 688 aaKnown RBP19.44■□□□□ 0.7
SNX3-204ENST00000426155 CARD11Q9BXL7 1154 aa19.44■□□□□ 0.7
SNX3-204ENST00000426155 CABP2Q9NPB3 220 aa19.44■□□□□ 0.7
SNX3-204ENST00000426155 SBNO1A3KN83 1393 aa19.44■□□□□ 0.7
SNX3-204ENST00000426155 LMOD2Q6P5Q4 547 aa19.42■□□□□ 0.7
SNX3-204ENST00000426155 NGDNQ8NEJ9 315 aaKnown RBP19.42■□□□□ 0.7
SNX3-204ENST00000426155 PPIP5K1Q6PFW1 1433 aa19.42■□□□□ 0.7
SNX3-204ENST00000426155 CABLES1Q8TDN4 633 aa19.41■□□□□ 0.7
SNX3-204ENST00000426155 PLCH1Q4KWH8 1693 aa19.4■□□□□ 0.7
SNX3-204ENST00000426155 SOCS7O14512 581 aa19.4■□□□□ 0.7
SNX3-204ENST00000426155 CCDC61Q9Y6R9 512 aa19.39■□□□□ 0.69
SNX3-204ENST00000426155 POLR3AO14802 1390 aaPredicted RBP19.39■□□□□ 0.69
SNX3-204ENST00000426155 ARHGEF10O15013 1369 aa19.39■□□□□ 0.69
SNX3-204ENST00000426155 PHRF1Q9P1Y6 1649 aaKnown RBP19.39■□□□□ 0.69
SNX3-204ENST00000426155 ACEP12821 1306 aa19.38■□□□□ 0.69
SNX3-204ENST00000426155 ZNF772Q68DY9 489 aaPredicted RBP19.38■□□□□ 0.69
SNX3-204ENST00000426155 NGLY1Q96IV0 654 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms