RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 PLEKHH1Q9ULM0 1364 aa31.59■■■□□ 2.65
CDCP1-202ENST00000425231 LRP6O75581 1613 aa31.58■■■□□ 2.65
CDCP1-202ENST00000425231 LAMC1P11047 1609 aa31.58■■■□□ 2.65
CDCP1-202ENST00000425231 CDC42BPGQ6DT37 1551 aa31.58■■■□□ 2.65
CDCP1-202ENST00000425231 LRRC59Q96AG4 307 aaKnown RBP31.57■■■□□ 2.64
CDCP1-202ENST00000425231 SIRT1Q96EB6 747 aa31.57■■■□□ 2.64
CDCP1-202ENST00000425231 DHX57Q6P158 1386 aaKnown RBP31.55■■■□□ 2.64
CDCP1-202ENST00000425231 POTEAQ6S8J7 498 aa31.55■■■□□ 2.64
CDCP1-202ENST00000425231 DCAF11Q8TEB1 546 aa31.54■■■□□ 2.64
CDCP1-202ENST00000425231 KDM2AQ9Y2K7 1162 aa31.52■■■□□ 2.64
CDCP1-202ENST00000425231 STAC3Q96MF2 364 aa31.5■■■□□ 2.63
CDCP1-202ENST00000425231 SOS2Q07890 1332 aaPredicted RBP31.49■■■□□ 2.63
CDCP1-202ENST00000425231 ADGRB1O14514 1584 aa31.47■■■□□ 2.63
CDCP1-202ENST00000425231 PNPLA6Q8IY17 1366 aa31.47■■■□□ 2.63
CDCP1-202ENST00000425231 ESCO1Q5FWF5 840 aa31.47■■■□□ 2.63
CDCP1-202ENST00000425231 NUTM2BA6NNL0 878 aaPredicted RBP31.46■■■□□ 2.63
CDCP1-202ENST00000425231 NUTM2EB1AL46 878 aaPredicted RBP31.46■■■□□ 2.63
CDCP1-202ENST00000425231 MEX3CQ5U5Q3 659 aaKnown RBP31.46■■■□□ 2.63
CDCP1-202ENST00000425231 NUTM2AQ8IVF1 878 aaPredicted RBP31.46■■■□□ 2.63
CDCP1-202ENST00000425231 NUTM2FA1L443 756 aa31.44■■■□□ 2.62
CDCP1-202ENST00000425231 PRAM1Q96QH2 718 aa31.43■■■□□ 2.62
CDCP1-202ENST00000425231 FMN2Q9NZ56 1722 aa31.43■■■□□ 2.62
CDCP1-202ENST00000425231 DLC1Q96QB1 1528 aa31.43■■■□□ 2.62
CDCP1-202ENST00000425231 NPHP3Q7Z494 1330 aa31.4■■■□□ 2.62
CDCP1-202ENST00000425231 FOXO3O43524 673 aa31.39■■■□□ 2.62
CDCP1-202ENST00000425231 SAFB2Q14151 953 aaKnown RBP eCLIP31.39■■■□□ 2.62
CDCP1-202ENST00000425231 TRAK1Q9UPV9 953 aa31.38■■■□□ 2.61
CDCP1-202ENST00000425231 PXDNQ92626 1479 aa31.36■■■□□ 2.61
CDCP1-202ENST00000425231 ZNF772Q68DY9 489 aaPredicted RBP31.36■■■□□ 2.61
CDCP1-202ENST00000425231 POGKQ9P215 609 aa31.36■■■□□ 2.61
CDCP1-202ENST00000425231 RGPD8O14715 1765 aaPredicted RBP31.32■■■□□ 2.6
CDCP1-202ENST00000425231 XPCQ01831 940 aaPredicted RBP31.32■■■□□ 2.6
CDCP1-202ENST00000425231 COL22A1Q8NFW1 1626 aaPredicted RBP31.29■■■□□ 2.6
CDCP1-202ENST00000425231 KIF1AQ12756 1690 aa31.29■■■□□ 2.6
CDCP1-202ENST00000425231 AFF2P51816 1311 aa31.29■■■□□ 2.6
CDCP1-202ENST00000425231 ADGRB2O60241 1585 aa31.28■■■□□ 2.6
CDCP1-202ENST00000425231 C8orf37Q96NL8 207 aa31.27■■■□□ 2.6
CDCP1-202ENST00000425231 ADAMTS2O95450 1211 aa31.25■■■□□ 2.59
CDCP1-202ENST00000425231 PHF8Q9UPP1 1060 aa31.25■■■□□ 2.59
CDCP1-202ENST00000425231 HIRIP3Q9BW71 556 aaPredicted RBP31.24■■■□□ 2.59
CDCP1-202ENST00000425231 MINK1Q8N4C8 1332 aaPredicted RBP31.24■■■□□ 2.59
CDCP1-202ENST00000425231 USP32Q8NFA0 1604 aa31.23■■■□□ 2.59
CDCP1-202ENST00000425231 ANKARQ7Z5J8 1434 aa31.22■■■□□ 2.59
CDCP1-202ENST00000425231 KIAA1210Q9ULL0 1709 aa31.22■■■□□ 2.59
CDCP1-202ENST00000425231 KRT28Q7Z3Y7 464 aa31.22■■■□□ 2.59
CDCP1-202ENST00000425231 ARHGEF28Q8N1W1 1705 aaKnown RBP31.21■■■□□ 2.59
CDCP1-202ENST00000425231 SPATA31A3Q5VYP0 1347 aa31.2■■■□□ 2.59
CDCP1-202ENST00000425231 NGLY1Q96IV0 654 aa31.2■■■□□ 2.59
CDCP1-202ENST00000425231 SIN3AQ96ST3 1273 aa31.19■■■□□ 2.58
CDCP1-202ENST00000425231 WASLO00401 505 aaPredicted RBP31.18■■■□□ 2.58
CDCP1-202ENST00000425231 RXRBP28702 533 aa31.18■■■□□ 2.58
CDCP1-202ENST00000425231 NBPF1Q3BBV0 1214 aa31.18■■■□□ 2.58
CDCP1-202ENST00000425231 L3MBTL2Q969R5 705 aa31.16■■■□□ 2.58
CDCP1-202ENST00000425231 PRR36Q9H6K5 1346 aa31.16■■■□□ 2.58
CDCP1-202ENST00000425231 PMFBP1Q8TBY8 1022 aa31.15■■■□□ 2.58
CDCP1-202ENST00000425231 QTRT2Q9H974 415 aaKnown RBP31.15■■■□□ 2.58
CDCP1-202ENST00000425231 PSME1Q06323 249 aa31.14■■■□□ 2.58
CDCP1-202ENST00000425231 TULP4Q9NRJ4 1543 aa31.13■■■□□ 2.57
CDCP1-202ENST00000425231 EIF3AQ14152 1382 aaKnown RBP31.13■■■□□ 2.57
CDCP1-202ENST00000425231 FNBP4Q8N3X1 1017 aaPredicted RBP31.13■■■□□ 2.57
CDCP1-202ENST00000425231 SBNO1A3KN83 1393 aa31.1■■■□□ 2.57
CDCP1-202ENST00000425231 TNS3Q68CZ2 1445 aa31.1■■■□□ 2.57
CDCP1-202ENST00000425231 CDK12Q9NYV4 1490 aaPredicted RBP31.1■■■□□ 2.57
CDCP1-202ENST00000425231 NEUROD1Q13562 356 aa31.09■■■□□ 2.57
CDCP1-202ENST00000425231 USP21Q9UK80 565 aa31.09■■■□□ 2.57
CDCP1-202ENST00000425231 MARF1Q9Y4F3 1742 aaKnown RBP31.09■■■□□ 2.57
CDCP1-202ENST00000425231 RBM6P78332 1123 aaKnown RBP31.07■■■□□ 2.57
CDCP1-202ENST00000425231 CDK19Q9BWU1 502 aa31.04■■■□□ 2.56
CDCP1-202ENST00000425231 ATP7BP35670 1465 aa31.03■■■□□ 2.56
CDCP1-202ENST00000425231 TRIM26Q12899 539 aaPredicted RBP31.03■■■□□ 2.56
CDCP1-202ENST00000425231 NUDT16Q96DE0 195 aaKnown RBP31.03■■■□□ 2.56
CDCP1-202ENST00000425231 BCL9LQ86UU0 1499 aa31.02■■■□□ 2.56
CDCP1-202ENST00000425231 TRPC5Q9UL62 973 aaPredicted RBP31.02■■■□□ 2.56
CDCP1-202ENST00000425231 TRPM3Q9HCF6 1732 aaPredicted RBP31.02■■■□□ 2.56
CDCP1-202ENST00000425231 ARHGEF10O15013 1369 aa31.01■■■□□ 2.56
CDCP1-202ENST00000425231 CABLES1Q8TDN4 633 aa31.01■■■□□ 2.55
CDCP1-202ENST00000425231 LMOD2Q6P5Q4 547 aa31■■■□□ 2.55
CDCP1-202ENST00000425231 GPRASP1Q5JY77 1395 aa31■■■□□ 2.55
CDCP1-202ENST00000425231 RGS12O14924 1447 aa30.99■■■□□ 2.55
CDCP1-202ENST00000425231 ATRNO75882 1429 aa30.99■■■□□ 2.55
CDCP1-202ENST00000425231 NGDNQ8NEJ9 315 aaKnown RBP30.98■■■□□ 2.55
CDCP1-202ENST00000425231 ITSN1Q15811 1721 aa30.98■■■□□ 2.55
CDCP1-202ENST00000425231 TRPM1Q7Z4N2 1603 aa30.97■■■□□ 2.55
CDCP1-202ENST00000425231 CENPJQ9HC77 1338 aaPredicted RBP30.97■■■□□ 2.55
CDCP1-202ENST00000425231 ALS2Q96Q42 1657 aa30.95■■■□□ 2.55
CDCP1-202ENST00000425231 SLIT2O94813 1529 aa30.95■■■□□ 2.54
CDCP1-202ENST00000425231 ABCA3Q99758 1704 aa30.94■■■□□ 2.54
CDCP1-202ENST00000425231 PLEKHG5O94827 1062 aa30.94■■■□□ 2.54
CDCP1-202ENST00000425231 HAP1P54257 671 aaPredicted RBP30.94■■■□□ 2.54
CDCP1-202ENST00000425231 CCDC61Q9Y6R9 512 aa30.94■■■□□ 2.54
CDCP1-202ENST00000425231 UPF1Q92900 1129 aaKnown RBP eCLIP30.92■■■□□ 2.54
CDCP1-202ENST00000425231 TOPAZ1Q8N9V7 1692 aa30.91■■■□□ 2.54
CDCP1-202ENST00000425231 UNC5CLQ8IV45 518 aa30.9■■■□□ 2.54
CDCP1-202ENST00000425231 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.9■■■□□ 2.54
CDCP1-202ENST00000425231 NBPF8Q3BBV2 869 aa30.9■■■□□ 2.54
CDCP1-202ENST00000425231 QRICH2Q9H0J4 1663 aa30.89■■■□□ 2.54
CDCP1-202ENST00000425231 POLR3AO14802 1390 aaPredicted RBP30.89■■■□□ 2.54
CDCP1-202ENST00000425231 PLEKHG3A1L390 1219 aa30.89■■■□□ 2.53
CDCP1-202ENST00000425231 ROCK2O75116 1388 aaKnown RBP30.88■■■□□ 2.53
CDCP1-202ENST00000425231 PAK3O75914 559 aaPredicted RBP30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms