RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 BRINP3Q76B58 766 aa32.28■■■□□ 2.76
PTCHD3P2-201ENST00000424937 ARHGEF28Q8N1W1 1705 aaKnown RBP32.28■■■□□ 2.76
PTCHD3P2-201ENST00000424937 C1orf167Q5SNV9 1468 aa32.28■■■□□ 2.76
PTCHD3P2-201ENST00000424937 MED1Q15648 1581 aaPredicted RBP32.28■■■□□ 2.76
PTCHD3P2-201ENST00000424937 FMN2Q9NZ56 1722 aa32.26■■■□□ 2.76
PTCHD3P2-201ENST00000424937 L3MBTL2Q969R5 705 aa32.26■■■□□ 2.75
PTCHD3P2-201ENST00000424937 SIRT1Q96EB6 747 aa32.25■■■□□ 2.75
PTCHD3P2-201ENST00000424937 PRAM1Q96QH2 718 aa32.23■■■□□ 2.75
PTCHD3P2-201ENST00000424937 TRAK1Q9UPV9 953 aa32.23■■■□□ 2.75
PTCHD3P2-201ENST00000424937 PCGF6Q9BYE7 350 aa32.22■■■□□ 2.75
PTCHD3P2-201ENST00000424937 DISP3Q9P2K9 1392 aa32.21■■■□□ 2.75
PTCHD3P2-201ENST00000424937 SAFB2Q14151 953 aaKnown RBP eCLIP32.21■■■□□ 2.75
PTCHD3P2-201ENST00000424937 POGKQ9P215 609 aa32.19■■■□□ 2.74
PTCHD3P2-201ENST00000424937 TRPM1Q7Z4N2 1603 aa32.18■■■□□ 2.74
PTCHD3P2-201ENST00000424937 ADGRB2O60241 1585 aa32.18■■■□□ 2.74
PTCHD3P2-201ENST00000424937 RGPD8O14715 1765 aaPredicted RBP32.17■■■□□ 2.74
PTCHD3P2-201ENST00000424937 SHPRHQ149N8 1683 aa32.15■■■□□ 2.74
PTCHD3P2-201ENST00000424937 NUTM2FA1L443 756 aa32.13■■■□□ 2.73
PTCHD3P2-201ENST00000424937 ORAI2Q96SN7 254 aa32.13■■■□□ 2.73
PTCHD3P2-201ENST00000424937 JCADQ9P266 1359 aa32.12■■■□□ 2.73
PTCHD3P2-201ENST00000424937 TONSLQ96HA7 1378 aa32.11■■■□□ 2.73
PTCHD3P2-201ENST00000424937 NBPF1Q3BBV0 1214 aa32.11■■■□□ 2.73
PTCHD3P2-201ENST00000424937 DDX17Q92841 729 aaKnown RBP32.11■■■□□ 2.73
PTCHD3P2-201ENST00000424937 KIF1AQ12756 1690 aa32.1■■■□□ 2.73
PTCHD3P2-201ENST00000424937 ESCO1Q5FWF5 840 aa32.08■■■□□ 2.73
PTCHD3P2-201ENST00000424937 MINK1Q8N4C8 1332 aaPredicted RBP32.07■■■□□ 2.72
PTCHD3P2-201ENST00000424937 USP32Q8NFA0 1604 aa32.07■■■□□ 2.72
PTCHD3P2-201ENST00000424937 HIRIP3Q9BW71 556 aaPredicted RBP32.06■■■□□ 2.72
PTCHD3P2-201ENST00000424937 QRICH2Q9H0J4 1663 aa32.02■■■□□ 2.72
PTCHD3P2-201ENST00000424937 ROCK2O75116 1388 aaKnown RBP32■■■□□ 2.71
PTCHD3P2-201ENST00000424937 TULP4Q9NRJ4 1543 aa32■■■□□ 2.71
PTCHD3P2-201ENST00000424937 ANKARQ7Z5J8 1434 aa32■■■□□ 2.71
PTCHD3P2-201ENST00000424937 PHF23Q9BUL5 403 aaPredicted RBP31.99■■■□□ 2.71
PTCHD3P2-201ENST00000424937 NBPF8Q3BBV2 869 aa31.98■■■□□ 2.71
PTCHD3P2-201ENST00000424937 NPHP3Q7Z494 1330 aa31.98■■■□□ 2.71
PTCHD3P2-201ENST00000424937 ITSN1Q15811 1721 aa31.97■■■□□ 2.71
PTCHD3P2-201ENST00000424937 EIF3AQ14152 1382 aaKnown RBP31.97■■■□□ 2.71
PTCHD3P2-201ENST00000424937 LRRC59Q96AG4 307 aaKnown RBP31.97■■■□□ 2.71
PTCHD3P2-201ENST00000424937 SOS2Q07890 1332 aaPredicted RBP31.97■■■□□ 2.71
PTCHD3P2-201ENST00000424937 PXDNQ92626 1479 aa31.97■■■□□ 2.71
PTCHD3P2-201ENST00000424937 SPATA31A6Q5VVP1 1343 aa31.96■■■□□ 2.71
PTCHD3P2-201ENST00000424937 LRP6O75581 1613 aa31.95■■■□□ 2.71
PTCHD3P2-201ENST00000424937 WASLO00401 505 aaPredicted RBP31.94■■■□□ 2.7
PTCHD3P2-201ENST00000424937 FOXO3O43524 673 aa31.94■■■□□ 2.7
PTCHD3P2-201ENST00000424937 PNPLA6Q8IY17 1366 aa31.93■■■□□ 2.7
PTCHD3P2-201ENST00000424937 RALGAPBQ86X10 1494 aa31.92■■■□□ 2.7
PTCHD3P2-201ENST00000424937 CENPJQ9HC77 1338 aaPredicted RBP31.92■■■□□ 2.7
PTCHD3P2-201ENST00000424937 XPCQ01831 940 aaPredicted RBP31.91■■■□□ 2.7
PTCHD3P2-201ENST00000424937 PHF8Q9UPP1 1060 aa31.91■■■□□ 2.7
PTCHD3P2-201ENST00000424937 PRR36Q9H6K5 1346 aa31.89■■■□□ 2.7
PTCHD3P2-201ENST00000424937 GPRASP1Q5JY77 1395 aa31.89■■■□□ 2.7
PTCHD3P2-201ENST00000424937 ATP7BP35670 1465 aa31.88■■■□□ 2.69
PTCHD3P2-201ENST00000424937 COL22A1Q8NFW1 1626 aaPredicted RBP31.88■■■□□ 2.69
PTCHD3P2-201ENST00000424937 TOPAZ1Q8N9V7 1692 aa31.88■■■□□ 2.69
PTCHD3P2-201ENST00000424937 CLSPNQ9HAW4 1339 aa31.86■■■□□ 2.69
PTCHD3P2-201ENST00000424937 NUTM2BA6NNL0 878 aaPredicted RBP31.85■■■□□ 2.69
PTCHD3P2-201ENST00000424937 NUTM2EB1AL46 878 aaPredicted RBP31.85■■■□□ 2.69
PTCHD3P2-201ENST00000424937 NUTM2AQ8IVF1 878 aaPredicted RBP31.85■■■□□ 2.69
PTCHD3P2-201ENST00000424937 MEX3CQ5U5Q3 659 aaKnown RBP31.84■■■□□ 2.69
PTCHD3P2-201ENST00000424937 PMFBP1Q8TBY8 1022 aa31.84■■■□□ 2.69
PTCHD3P2-201ENST00000424937 ILDR2Q71H61 639 aa31.83■■■□□ 2.69
PTCHD3P2-201ENST00000424937 CDK19Q9BWU1 502 aa31.83■■■□□ 2.69
PTCHD3P2-201ENST00000424937 KRT28Q7Z3Y7 464 aa31.8■■■□□ 2.68
PTCHD3P2-201ENST00000424937 CARD11Q9BXL7 1154 aa31.8■■■□□ 2.68
PTCHD3P2-201ENST00000424937 TRPM3Q9HCF6 1732 aaPredicted RBP31.8■■■□□ 2.68
PTCHD3P2-201ENST00000424937 CCER1Q8TC90 406 aaPredicted RBP31.79■■■□□ 2.68
PTCHD3P2-201ENST00000424937 NUDT16Q96DE0 195 aaKnown RBP31.79■■■□□ 2.68
PTCHD3P2-201ENST00000424937 RGS17Q9UGC6 210 aaPredicted RBP31.77■■■□□ 2.68
PTCHD3P2-201ENST00000424937 TNS3Q68CZ2 1445 aa31.76■■■□□ 2.68
PTCHD3P2-201ENST00000424937 PSME1Q06323 249 aa31.76■■■□□ 2.67
PTCHD3P2-201ENST00000424937 SPATA31A3Q5VYP0 1347 aa31.75■■■□□ 2.67
PTCHD3P2-201ENST00000424937 MARF1Q9Y4F3 1742 aaKnown RBP31.75■■■□□ 2.67
PTCHD3P2-201ENST00000424937 SRPK2P78362 688 aaKnown RBP31.74■■■□□ 2.67
PTCHD3P2-201ENST00000424937 SBNO1A3KN83 1393 aa31.72■■■□□ 2.67
PTCHD3P2-201ENST00000424937 ALS2Q96Q42 1657 aa31.72■■■□□ 2.67
PTCHD3P2-201ENST00000424937 ABCA3Q99758 1704 aa31.72■■■□□ 2.67
PTCHD3P2-201ENST00000424937 NGDNQ8NEJ9 315 aaKnown RBP31.71■■■□□ 2.67
PTCHD3P2-201ENST00000424937 CABP2Q9NPB3 220 aa31.7■■■□□ 2.67
PTCHD3P2-201ENST00000424937 CCDC61Q9Y6R9 512 aa31.69■■■□□ 2.66
PTCHD3P2-201ENST00000424937 EVC2Q86UK5 1308 aa31.69■■■□□ 2.66
PTCHD3P2-201ENST00000424937 ADAMTS2O95450 1211 aa31.68■■■□□ 2.66
PTCHD3P2-201ENST00000424937 PPIP5K1Q6PFW1 1433 aa31.67■■■□□ 2.66
PTCHD3P2-201ENST00000424937 TIMELESSQ9UNS1 1208 aa31.67■■■□□ 2.66
PTCHD3P2-201ENST00000424937 ARHGEF10O15013 1369 aa31.66■■■□□ 2.66
PTCHD3P2-201ENST00000424937 SBNO2Q9Y2G9 1366 aa31.66■■■□□ 2.66
PTCHD3P2-201ENST00000424937 LMOD2Q6P5Q4 547 aa31.65■■■□□ 2.66
PTCHD3P2-201ENST00000424937 C8orf37Q96NL8 207 aa31.65■■■□□ 2.66
PTCHD3P2-201ENST00000424937 POTEAQ6S8J7 498 aa31.64■■■□□ 2.66
PTCHD3P2-201ENST00000424937 POLR3AO14802 1390 aaPredicted RBP31.63■■■□□ 2.65
PTCHD3P2-201ENST00000424937 ACEP12821 1306 aa31.62■■■□□ 2.65
PTCHD3P2-201ENST00000424937 AFF2P51816 1311 aa31.62■■■□□ 2.65
PTCHD3P2-201ENST00000424937 PLEKHG3A1L390 1219 aa31.6■■■□□ 2.65
PTCHD3P2-201ENST00000424937 PLEKHG5O94827 1062 aa31.6■■■□□ 2.65
PTCHD3P2-201ENST00000424937 ZNF772Q68DY9 489 aaPredicted RBP31.6■■■□□ 2.65
PTCHD3P2-201ENST00000424937 CRYBG1Q9Y4K1 1723 aa31.59■■■□□ 2.65
PTCHD3P2-201ENST00000424937 PAK3O75914 559 aaPredicted RBP31.59■■■□□ 2.65
PTCHD3P2-201ENST00000424937 NGLY1Q96IV0 654 aa31.57■■■□□ 2.64
PTCHD3P2-201ENST00000424937 AKAP12Q02952 1782 aa31.56■■■□□ 2.64
PTCHD3P2-201ENST00000424937 HAP1P54257 671 aaPredicted RBP31.56■■■□□ 2.64
PTCHD3P2-201ENST00000424937 CABLES1Q8TDN4 633 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms