RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 JCADQ9P266 1359 aa26.07■■□□□ 1.76
SBDSP1-202ENST00000423945 SHPRHQ149N8 1683 aa26.04■■□□□ 1.76
SBDSP1-202ENST00000423945 DDX17Q92841 729 aaKnown RBP26.04■■□□□ 1.76
SBDSP1-202ENST00000423945 SIRT1Q96EB6 747 aa26.04■■□□□ 1.76
SBDSP1-202ENST00000423945 ORAI2Q96SN7 254 aa26.03■■□□□ 1.76
SBDSP1-202ENST00000423945 STAC3Q96MF2 364 aa26.02■■□□□ 1.76
SBDSP1-202ENST00000423945 DLC1Q96QB1 1528 aa26.02■■□□□ 1.76
SBDSP1-202ENST00000423945 FMN2Q9NZ56 1722 aa26.01■■□□□ 1.75
SBDSP1-202ENST00000423945 RGS17Q9UGC6 210 aaPredicted RBP26■■□□□ 1.75
SBDSP1-202ENST00000423945 LRP6O75581 1613 aa25.99■■□□□ 1.75
SBDSP1-202ENST00000423945 PHF23Q9BUL5 403 aaPredicted RBP25.98■■□□□ 1.75
SBDSP1-202ENST00000423945 PRAM1Q96QH2 718 aa25.96■■□□□ 1.75
SBDSP1-202ENST00000423945 TRIM26Q12899 539 aaPredicted RBP25.94■■□□□ 1.74
SBDSP1-202ENST00000423945 SIN3AQ96ST3 1273 aa25.94■■□□□ 1.74
SBDSP1-202ENST00000423945 KIAA1210Q9ULL0 1709 aa25.94■■□□□ 1.74
SBDSP1-202ENST00000423945 SPATA31A6Q5VVP1 1343 aa25.93■■□□□ 1.74
SBDSP1-202ENST00000423945 RGPD8O14715 1765 aaPredicted RBP25.93■■□□□ 1.74
SBDSP1-202ENST00000423945 NUTM2FA1L443 756 aa25.93■■□□□ 1.74
SBDSP1-202ENST00000423945 TRAK1Q9UPV9 953 aa25.93■■□□□ 1.74
SBDSP1-202ENST00000423945 ARHGEF28Q8N1W1 1705 aaKnown RBP25.92■■□□□ 1.74
SBDSP1-202ENST00000423945 SAFB2Q14151 953 aaKnown RBP eCLIP25.92■■□□□ 1.74
SBDSP1-202ENST00000423945 SOS2Q07890 1332 aaPredicted RBP25.91■■□□□ 1.74
SBDSP1-202ENST00000423945 ADGRB2O60241 1585 aa25.91■■□□□ 1.74
SBDSP1-202ENST00000423945 ESCO1Q5FWF5 840 aa25.9■■□□□ 1.74
SBDSP1-202ENST00000423945 LRRC59Q96AG4 307 aaKnown RBP25.9■■□□□ 1.74
SBDSP1-202ENST00000423945 PNPLA6Q8IY17 1366 aa25.9■■□□□ 1.74
SBDSP1-202ENST00000423945 PXDNQ92626 1479 aa25.88■■□□□ 1.73
SBDSP1-202ENST00000423945 USP32Q8NFA0 1604 aa25.88■■□□□ 1.73
SBDSP1-202ENST00000423945 L3MBTL2Q969R5 705 aa25.87■■□□□ 1.73
SBDSP1-202ENST00000423945 POGKQ9P215 609 aa25.87■■□□□ 1.73
SBDSP1-202ENST00000423945 KIF1AQ12756 1690 aa25.85■■□□□ 1.73
SBDSP1-202ENST00000423945 NBPF1Q3BBV0 1214 aa25.84■■□□□ 1.73
SBDSP1-202ENST00000423945 FOXO3O43524 673 aa25.83■■□□□ 1.73
SBDSP1-202ENST00000423945 POTEAQ6S8J7 498 aa25.83■■□□□ 1.73
SBDSP1-202ENST00000423945 NPHP3Q7Z494 1330 aa25.83■■□□□ 1.73
SBDSP1-202ENST00000423945 NEUROD1Q13562 356 aa25.82■■□□□ 1.72
SBDSP1-202ENST00000423945 HIRIP3Q9BW71 556 aaPredicted RBP25.82■■□□□ 1.72
SBDSP1-202ENST00000423945 NUTM2BA6NNL0 878 aaPredicted RBP25.81■■□□□ 1.72
SBDSP1-202ENST00000423945 NUTM2EB1AL46 878 aaPredicted RBP25.81■■□□□ 1.72
SBDSP1-202ENST00000423945 NUTM2AQ8IVF1 878 aaPredicted RBP25.81■■□□□ 1.72
SBDSP1-202ENST00000423945 MINK1Q8N4C8 1332 aaPredicted RBP25.81■■□□□ 1.72
SBDSP1-202ENST00000423945 COL22A1Q8NFW1 1626 aaPredicted RBP25.81■■□□□ 1.72
SBDSP1-202ENST00000423945 XPCQ01831 940 aaPredicted RBP25.8■■□□□ 1.72
SBDSP1-202ENST00000423945 ANKARQ7Z5J8 1434 aa25.79■■□□□ 1.72
SBDSP1-202ENST00000423945 TRPM1Q7Z4N2 1603 aa25.77■■□□□ 1.72
SBDSP1-202ENST00000423945 PRR36Q9H6K5 1346 aa25.77■■□□□ 1.72
SBDSP1-202ENST00000423945 MEX3CQ5U5Q3 659 aaKnown RBP25.76■■□□□ 1.71
SBDSP1-202ENST00000423945 PHF8Q9UPP1 1060 aa25.76■■□□□ 1.71
SBDSP1-202ENST00000423945 TULP4Q9NRJ4 1543 aa25.76■■□□□ 1.71
SBDSP1-202ENST00000423945 WASLO00401 505 aaPredicted RBP25.74■■□□□ 1.71
SBDSP1-202ENST00000423945 KRT28Q7Z3Y7 464 aa25.71■■□□□ 1.71
SBDSP1-202ENST00000423945 SPATA31A3Q5VYP0 1347 aa25.69■■□□□ 1.7
SBDSP1-202ENST00000423945 ATP7BP35670 1465 aa25.69■■□□□ 1.7
SBDSP1-202ENST00000423945 PMFBP1Q8TBY8 1022 aa25.69■■□□□ 1.7
SBDSP1-202ENST00000423945 EIF3AQ14152 1382 aaKnown RBP25.69■■□□□ 1.7
SBDSP1-202ENST00000423945 NBPF8Q3BBV2 869 aa25.68■■□□□ 1.7
SBDSP1-202ENST00000423945 AFF2P51816 1311 aa25.67■■□□□ 1.7
SBDSP1-202ENST00000423945 TRPM3Q9HCF6 1732 aaPredicted RBP25.67■■□□□ 1.7
SBDSP1-202ENST00000423945 MARF1Q9Y4F3 1742 aaKnown RBP25.66■■□□□ 1.7
SBDSP1-202ENST00000423945 ADAMTS2O95450 1211 aa25.66■■□□□ 1.7
SBDSP1-202ENST00000423945 QRICH2Q9H0J4 1663 aa25.66■■□□□ 1.7
SBDSP1-202ENST00000423945 ITSN1Q15811 1721 aa25.66■■□□□ 1.7
SBDSP1-202ENST00000423945 TNS3Q68CZ2 1445 aa25.65■■□□□ 1.7
SBDSP1-202ENST00000423945 ZNF772Q68DY9 489 aaPredicted RBP25.65■■□□□ 1.7
SBDSP1-202ENST00000423945 C8orf37Q96NL8 207 aa25.65■■□□□ 1.7
SBDSP1-202ENST00000423945 TOPAZ1Q8N9V7 1692 aa25.64■■□□□ 1.7
SBDSP1-202ENST00000423945 CDK19Q9BWU1 502 aa25.64■■□□□ 1.7
SBDSP1-202ENST00000423945 CENPJQ9HC77 1338 aaPredicted RBP25.63■■□□□ 1.69
SBDSP1-202ENST00000423945 SBNO1A3KN83 1393 aa25.63■■□□□ 1.69
SBDSP1-202ENST00000423945 NUDT16Q96DE0 195 aaKnown RBP25.62■■□□□ 1.69
SBDSP1-202ENST00000423945 PSME1Q06323 249 aa25.61■■□□□ 1.69
SBDSP1-202ENST00000423945 ALS2Q96Q42 1657 aa25.61■■□□□ 1.69
SBDSP1-202ENST00000423945 ABCA3Q99758 1704 aa25.6■■□□□ 1.69
SBDSP1-202ENST00000423945 ROCK2O75116 1388 aaKnown RBP25.6■■□□□ 1.69
SBDSP1-202ENST00000423945 GPRASP1Q5JY77 1395 aa25.59■■□□□ 1.69
SBDSP1-202ENST00000423945 TONSLQ96HA7 1378 aa25.58■■□□□ 1.69
SBDSP1-202ENST00000423945 NGLY1Q96IV0 654 aa25.58■■□□□ 1.69
SBDSP1-202ENST00000423945 FNBP4Q8N3X1 1017 aaPredicted RBP25.55■■□□□ 1.68
SBDSP1-202ENST00000423945 CABLES1Q8TDN4 633 aa25.54■■□□□ 1.68
SBDSP1-202ENST00000423945 ARHGEF10O15013 1369 aa25.54■■□□□ 1.68
SBDSP1-202ENST00000423945 RALGAPBQ86X10 1494 aa25.53■■□□□ 1.68
SBDSP1-202ENST00000423945 NGDNQ8NEJ9 315 aaKnown RBP25.53■■□□□ 1.68
SBDSP1-202ENST00000423945 CRYBG1Q9Y4K1 1723 aa25.53■■□□□ 1.68
SBDSP1-202ENST00000423945 POLR3AO14802 1390 aaPredicted RBP25.53■■□□□ 1.68
SBDSP1-202ENST00000423945 QTRT2Q9H974 415 aaKnown RBP25.52■■□□□ 1.68
SBDSP1-202ENST00000423945 CCDC61Q9Y6R9 512 aa25.52■■□□□ 1.68
SBDSP1-202ENST00000423945 PLEKHG3A1L390 1219 aa25.51■■□□□ 1.67
SBDSP1-202ENST00000423945 RXRBP28702 533 aa25.51■■□□□ 1.67
SBDSP1-202ENST00000423945 CABP2Q9NPB3 220 aa25.51■■□□□ 1.67
SBDSP1-202ENST00000423945 BCL9LQ86UU0 1499 aa25.51■■□□□ 1.67
SBDSP1-202ENST00000423945 LMOD2Q6P5Q4 547 aa25.5■■□□□ 1.67
SBDSP1-202ENST00000423945 USP21Q9UK80 565 aa25.5■■□□□ 1.67
SBDSP1-202ENST00000423945 CDK12Q9NYV4 1490 aaPredicted RBP25.49■■□□□ 1.67
SBDSP1-202ENST00000423945 ACEP12821 1306 aa25.49■■□□□ 1.67
SBDSP1-202ENST00000423945 SLIT2O94813 1529 aa25.48■■□□□ 1.67
SBDSP1-202ENST00000423945 ATRNO75882 1429 aa25.48■■□□□ 1.67
SBDSP1-202ENST00000423945 PLEKHG5O94827 1062 aa25.48■■□□□ 1.67
SBDSP1-202ENST00000423945 SRPK2P78362 688 aaKnown RBP25.48■■□□□ 1.67
SBDSP1-202ENST00000423945 PCGF6Q9BYE7 350 aa25.48■■□□□ 1.67
SBDSP1-202ENST00000423945 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms