RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 TRPM2O94759 1503 aa17.22■□□□□ 0.35
MCF2L-213ENST00000421756 CENPQQ7L2Z9 268 aaPredicted RBP17.22■□□□□ 0.35
MCF2L-213ENST00000421756 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
MCF2L-213ENST00000421756 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.35
MCF2L-213ENST00000421756 ESF1Q9H501 851 aaKnown RBP17.21■□□□□ 0.35
MCF2L-213ENST00000421756 ZRANB1Q9UGI0 708 aa17.2■□□□□ 0.34
MCF2L-213ENST00000421756 ZNF521Q96K83 1311 aa17.2■□□□□ 0.34
MCF2L-213ENST00000421756 MAPK8IP3Q9UPT6 1336 aa17.2■□□□□ 0.34
MCF2L-213ENST00000421756 SMC4Q9NTJ3 1288 aa17.19■□□□□ 0.34
MCF2L-213ENST00000421756 STAC3Q96MF2 364 aa17.19■□□□□ 0.34
MCF2L-213ENST00000421756 EXOSC9Q06265 439 aaKnown RBP17.19■□□□□ 0.34
MCF2L-213ENST00000421756 TXNDC2Q86VQ3 553 aa17.19■□□□□ 0.34
MCF2L-213ENST00000421756 ZMYM4Q5VZL5 1548 aa17.18■□□□□ 0.34
MCF2L-213ENST00000421756 YEATS2Q9ULM3 1422 aa17.18■□□□□ 0.34
MCF2L-213ENST00000421756 CDK19Q9BWU1 502 aa17.18■□□□□ 0.34
MCF2L-213ENST00000421756 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
MCF2L-213ENST00000421756 SLKQ9H2G2 1235 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-213ENST00000421756 ITPRIPQ8IWB1 547 aa17.17■□□□□ 0.34
MCF2L-213ENST00000421756 SEC24BO95487 1268 aa17.17■□□□□ 0.34
MCF2L-213ENST00000421756 RIPK4P57078 832 aa17.17■□□□□ 0.34
MCF2L-213ENST00000421756 RARSP54136 660 aaKnown RBP17.16■□□□□ 0.34
MCF2L-213ENST00000421756 SPHKAPQ2M3C7 1700 aa17.16■□□□□ 0.34
MCF2L-213ENST00000421756 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
MCF2L-213ENST00000421756 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
MCF2L-213ENST00000421756 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
MCF2L-213ENST00000421756 MS4A1P11836 297 aa17.14■□□□□ 0.33
MCF2L-213ENST00000421756 FYB1O15117 783 aa17.14■□□□□ 0.33
MCF2L-213ENST00000421756 NKTRP30414 1462 aaKnown RBP17.13■□□□□ 0.33
MCF2L-213ENST00000421756 RRS1Q15050 365 aaKnown RBP17.13■□□□□ 0.33
MCF2L-213ENST00000421756 KDM2BQ8NHM5 1336 aa17.13■□□□□ 0.33
MCF2L-213ENST00000421756 C8orf34Q49A92 452 aa17.12■□□□□ 0.33
MCF2L-213ENST00000421756 PIK3C2GO75747 1445 aa17.12■□□□□ 0.33
MCF2L-213ENST00000421756 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-213ENST00000421756 TERF2IPQ9NYB0 399 aa17.12■□□□□ 0.33
MCF2L-213ENST00000421756 ABCA6Q8N139 1617 aa17.11■□□□□ 0.33
MCF2L-213ENST00000421756 EMILIN1Q9Y6C2 1016 aa17.11■□□□□ 0.33
MCF2L-213ENST00000421756 CEP152O94986 1710 aa17.11■□□□□ 0.33
MCF2L-213ENST00000421756 C1orf115Q9H7X2 142 aa17.11■□□□□ 0.33
MCF2L-213ENST00000421756 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
MCF2L-213ENST00000421756 PRKAR2BP31323 418 aa17.1■□□□□ 0.33
MCF2L-213ENST00000421756 DCTN1Q14203 1278 aa17.1■□□□□ 0.33
MCF2L-213ENST00000421756 POGZQ7Z3K3 1410 aa17.1■□□□□ 0.33
MCF2L-213ENST00000421756 TET3O43151 1660 aa17.09■□□□□ 0.33
MCF2L-213ENST00000421756 NME9Q86XW9 330 aa17.09■□□□□ 0.33
MCF2L-213ENST00000421756 DIAPH1O60610 1272 aaKnown RBP17.09■□□□□ 0.33
MCF2L-213ENST00000421756 PPRC1Q5VV67 1664 aaKnown RBP17.09■□□□□ 0.33
MCF2L-213ENST00000421756 TMPOP42166 694 aaKnown RBP17.09■□□□□ 0.33
MCF2L-213ENST00000421756 TRMT2AQ8IZ69 625 aaKnown RBP17.09■□□□□ 0.33
MCF2L-213ENST00000421756 MYH16Q9H6N6 1097 aa17.09■□□□□ 0.33
MCF2L-213ENST00000421756 SSH1Q8WYL5 1049 aa17.08■□□□□ 0.33
MCF2L-213ENST00000421756 PDZRN3Q9UPQ7 1066 aa17.08■□□□□ 0.33
MCF2L-213ENST00000421756 APBB1O00213 710 aa17.08■□□□□ 0.32
MCF2L-213ENST00000421756 KIDINS220Q9ULH0 1771 aa17.08■□□□□ 0.32
MCF2L-213ENST00000421756 CEBPAP49715 358 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-213ENST00000421756 NOB1Q9ULX3 412 aaKnown RBP17.07■□□□□ 0.32
MCF2L-213ENST00000421756 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
MCF2L-213ENST00000421756 MAP3K4Q9Y6R4 1608 aa17.07■□□□□ 0.32
MCF2L-213ENST00000421756 EFCAB6Q5THR3 1501 aa17.06■□□□□ 0.32
MCF2L-213ENST00000421756 FAM83GA6ND36 823 aa17.06■□□□□ 0.32
MCF2L-213ENST00000421756 MROH2AA6NES4 1674 aa17.06■□□□□ 0.32
MCF2L-213ENST00000421756 KDM5AP29375 1690 aaKnown RBP17.06■□□□□ 0.32
MCF2L-213ENST00000421756 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
MCF2L-213ENST00000421756 PHACTR3Q96KR7 559 aa17.05■□□□□ 0.32
MCF2L-213ENST00000421756 SLC52A1Q9NWF4 448 aa17.05■□□□□ 0.32
MCF2L-213ENST00000421756 SYNMO15061 1565 aa17.05■□□□□ 0.32
MCF2L-213ENST00000421756 IQGAP1P46940 1657 aa17.05■□□□□ 0.32
MCF2L-213ENST00000421756 DZIP1LQ8IYY4 767 aaKnown RBP17.05■□□□□ 0.32
MCF2L-213ENST00000421756 SLC26A8Q96RN1 970 aa17.05■□□□□ 0.32
MCF2L-213ENST00000421756 INO80Q9ULG1 1556 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-213ENST00000421756 DDRGK1Q96HY6 314 aa17.05■□□□□ 0.32
MCF2L-213ENST00000421756 ZKSCAN2Q63HK3 967 aa17.04■□□□□ 0.32
MCF2L-213ENST00000421756 POLR3AO14802 1390 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-213ENST00000421756 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
MCF2L-213ENST00000421756 FRAT2O75474 233 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-213ENST00000421756 RBM33Q96EV2 1170 aaKnown RBP17.04■□□□□ 0.32
MCF2L-213ENST00000421756 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
MCF2L-213ENST00000421756 MROH1Q8NDA8 1641 aa17.04■□□□□ 0.32
MCF2L-213ENST00000421756 RPGRIP1LQ68CZ1 1315 aa17.04■□□□□ 0.32
MCF2L-213ENST00000421756 KIF1BO60333 1816 aa17.04■□□□□ 0.32
MCF2L-213ENST00000421756 ABCA9Q8IUA7 1624 aa17.03■□□□□ 0.32
MCF2L-213ENST00000421756 NFKBIBQ15653 356 aa17.03■□□□□ 0.32
MCF2L-213ENST00000421756 PDE3AQ14432 1141 aa17.03■□□□□ 0.32
MCF2L-213ENST00000421756 TRIM27P14373 513 aa17.02■□□□□ 0.32
MCF2L-213ENST00000421756 LNPKQ9C0E8 428 aa17.02■□□□□ 0.32
MCF2L-213ENST00000421756 TRIM35Q9UPQ4 493 aa17.02■□□□□ 0.31
MCF2L-213ENST00000421756 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
MCF2L-213ENST00000421756 TMEM57Q8N5G2 664 aa17.01■□□□□ 0.31
MCF2L-213ENST00000421756 IL27Q8NEV9 243 aa17.01■□□□□ 0.31
MCF2L-213ENST00000421756 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
MCF2L-213ENST00000421756 ANKRD36BQ8N2N9 1353 aa17■□□□□ 0.31
MCF2L-213ENST00000421756 INSRP06213 1382 aa17■□□□□ 0.31
MCF2L-213ENST00000421756 NPC1L1Q9UHC9 1359 aa17■□□□□ 0.31
MCF2L-213ENST00000421756 TSPYL6Q8N831 410 aa17■□□□□ 0.31
MCF2L-213ENST00000421756 WDR63Q8IWG1 891 aa16.99■□□□□ 0.31
MCF2L-213ENST00000421756 LAMC1P11047 1609 aa16.99■□□□□ 0.31
MCF2L-213ENST00000421756 KRT24Q2M2I5 525 aa16.99■□□□□ 0.31
MCF2L-213ENST00000421756 RWDD1Q9H446 243 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-213ENST00000421756 MIS18AQ9NYP9 233 aa16.99■□□□□ 0.31
MCF2L-213ENST00000421756 MYOM2P54296 1465 aa16.99■□□□□ 0.31
MCF2L-213ENST00000421756 FOXD4L1Q9NU39 408 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms