RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 WAPLQ7Z5K2 1190 aa23.2■■□□□ 1.3
NOD1-204ENST00000419601 KDM2AQ9Y2K7 1162 aa23.2■■□□□ 1.3
NOD1-204ENST00000419601 SIRT1Q96EB6 747 aa23.19■■□□□ 1.3
NOD1-204ENST00000419601 PLEKHH1Q9ULM0 1364 aa23.17■■□□□ 1.3
NOD1-204ENST00000419601 SHPRHQ149N8 1683 aa23.17■■□□□ 1.3
NOD1-204ENST00000419601 SPATA31A6Q5VVP1 1343 aa23.16■■□□□ 1.3
NOD1-204ENST00000419601 POTEAQ6S8J7 498 aa23.16■■□□□ 1.3
NOD1-204ENST00000419601 ADGRB1O14514 1584 aa23.14■■□□□ 1.3
NOD1-204ENST00000419601 ORAI2Q96SN7 254 aa23.14■■□□□ 1.29
NOD1-204ENST00000419601 DLC1Q96QB1 1528 aa23.13■■□□□ 1.29
NOD1-204ENST00000419601 LRRC59Q96AG4 307 aaKnown RBP23.13■■□□□ 1.29
NOD1-204ENST00000419601 DDX17Q92841 729 aaKnown RBP23.12■■□□□ 1.29
NOD1-204ENST00000419601 PRAM1Q96QH2 718 aa23.1■■□□□ 1.29
NOD1-204ENST00000419601 FMN2Q9NZ56 1722 aa23.09■■□□□ 1.29
NOD1-204ENST00000419601 LRP6O75581 1613 aa23.08■■□□□ 1.29
NOD1-204ENST00000419601 ESCO1Q5FWF5 840 aa23.08■■□□□ 1.29
NOD1-204ENST00000419601 POGKQ9P215 609 aa23.07■■□□□ 1.28
NOD1-204ENST00000419601 SOS2Q07890 1332 aaPredicted RBP23.07■■□□□ 1.28
NOD1-204ENST00000419601 TRAK1Q9UPV9 953 aa23.06■■□□□ 1.28
NOD1-204ENST00000419601 NUTM2FA1L443 756 aa23.05■■□□□ 1.28
NOD1-204ENST00000419601 SAFB2Q14151 953 aaKnown RBP eCLIP23.05■■□□□ 1.28
NOD1-204ENST00000419601 NPHP3Q7Z494 1330 aa23.05■■□□□ 1.28
NOD1-204ENST00000419601 PNPLA6Q8IY17 1366 aa23.04■■□□□ 1.28
NOD1-204ENST00000419601 MEX3CQ5U5Q3 659 aaKnown RBP23.04■■□□□ 1.28
NOD1-204ENST00000419601 KIAA1210Q9ULL0 1709 aa23.03■■□□□ 1.28
NOD1-204ENST00000419601 TRIM26Q12899 539 aaPredicted RBP23.03■■□□□ 1.28
NOD1-204ENST00000419601 NUTM2BA6NNL0 878 aaPredicted RBP23.02■■□□□ 1.28
NOD1-204ENST00000419601 NUTM2EB1AL46 878 aaPredicted RBP23.02■■□□□ 1.28
NOD1-204ENST00000419601 NUTM2AQ8IVF1 878 aaPredicted RBP23.02■■□□□ 1.28
NOD1-204ENST00000419601 ADGRB2O60241 1585 aa23.01■■□□□ 1.27
NOD1-204ENST00000419601 KIF1AQ12756 1690 aa23.01■■□□□ 1.27
NOD1-204ENST00000419601 FOXO3O43524 673 aa23■■□□□ 1.27
NOD1-204ENST00000419601 PXDNQ92626 1479 aa22.99■■□□□ 1.27
NOD1-204ENST00000419601 ARHGEF28Q8N1W1 1705 aaKnown RBP22.98■■□□□ 1.27
NOD1-204ENST00000419601 SIN3AQ96ST3 1273 aa22.97■■□□□ 1.27
NOD1-204ENST00000419601 RGPD8O14715 1765 aaPredicted RBP22.96■■□□□ 1.27
NOD1-204ENST00000419601 L3MBTL2Q969R5 705 aa22.96■■□□□ 1.27
NOD1-204ENST00000419601 MINK1Q8N4C8 1332 aaPredicted RBP22.96■■□□□ 1.27
NOD1-204ENST00000419601 ANKARQ7Z5J8 1434 aa22.96■■□□□ 1.27
NOD1-204ENST00000419601 EIF3AQ14152 1382 aaKnown RBP22.95■■□□□ 1.26
NOD1-204ENST00000419601 ZNF772Q68DY9 489 aaPredicted RBP22.95■■□□□ 1.26
NOD1-204ENST00000419601 HIRIP3Q9BW71 556 aaPredicted RBP22.95■■□□□ 1.26
NOD1-204ENST00000419601 COL22A1Q8NFW1 1626 aaPredicted RBP22.94■■□□□ 1.26
NOD1-204ENST00000419601 XPCQ01831 940 aaPredicted RBP22.94■■□□□ 1.26
NOD1-204ENST00000419601 NEUROD1Q13562 356 aa22.94■■□□□ 1.26
NOD1-204ENST00000419601 PHF8Q9UPP1 1060 aa22.94■■□□□ 1.26
NOD1-204ENST00000419601 USP32Q8NFA0 1604 aa22.93■■□□□ 1.26
NOD1-204ENST00000419601 NBPF1Q3BBV0 1214 aa22.92■■□□□ 1.26
NOD1-204ENST00000419601 WASLO00401 505 aaPredicted RBP22.91■■□□□ 1.26
NOD1-204ENST00000419601 TULP4Q9NRJ4 1543 aa22.91■■□□□ 1.26
NOD1-204ENST00000419601 KRT28Q7Z3Y7 464 aa22.9■■□□□ 1.26
NOD1-204ENST00000419601 AFF2P51816 1311 aa22.89■■□□□ 1.26
NOD1-204ENST00000419601 PSME1Q06323 249 aa22.88■■□□□ 1.25
NOD1-204ENST00000419601 C8orf37Q96NL8 207 aa22.88■■□□□ 1.25
NOD1-204ENST00000419601 SPATA31A3Q5VYP0 1347 aa22.87■■□□□ 1.25
NOD1-204ENST00000419601 ADAMTS2O95450 1211 aa22.87■■□□□ 1.25
NOD1-204ENST00000419601 PRR36Q9H6K5 1346 aa22.85■■□□□ 1.25
NOD1-204ENST00000419601 PMFBP1Q8TBY8 1022 aa22.85■■□□□ 1.25
NOD1-204ENST00000419601 TRPM1Q7Z4N2 1603 aa22.85■■□□□ 1.25
NOD1-204ENST00000419601 TNS3Q68CZ2 1445 aa22.84■■□□□ 1.25
NOD1-204ENST00000419601 NGLY1Q96IV0 654 aa22.84■■□□□ 1.25
NOD1-204ENST00000419601 SBNO1A3KN83 1393 aa22.83■■□□□ 1.25
NOD1-204ENST00000419601 ITSN1Q15811 1721 aa22.82■■□□□ 1.24
NOD1-204ENST00000419601 CENPJQ9HC77 1338 aaPredicted RBP22.82■■□□□ 1.24
NOD1-204ENST00000419601 ATP7BP35670 1465 aa22.81■■□□□ 1.24
NOD1-204ENST00000419601 UPF1Q92900 1129 aaKnown RBP eCLIP22.81■■□□□ 1.24
NOD1-204ENST00000419601 CDK19Q9BWU1 502 aa22.81■■□□□ 1.24
NOD1-204ENST00000419601 MARF1Q9Y4F3 1742 aaKnown RBP22.8■■□□□ 1.24
NOD1-204ENST00000419601 GPRASP1Q5JY77 1395 aa22.8■■□□□ 1.24
NOD1-204ENST00000419601 RXRBP28702 533 aa22.8■■□□□ 1.24
NOD1-204ENST00000419601 NUDT16Q96DE0 195 aaKnown RBP22.8■■□□□ 1.24
NOD1-204ENST00000419601 ARHGEF10O15013 1369 aa22.79■■□□□ 1.24
NOD1-204ENST00000419601 ROCK2O75116 1388 aaKnown RBP22.78■■□□□ 1.24
NOD1-204ENST00000419601 QRICH2Q9H0J4 1663 aa22.77■■□□□ 1.24
NOD1-204ENST00000419601 TONSLQ96HA7 1378 aa22.77■■□□□ 1.24
NOD1-204ENST00000419601 TRPM3Q9HCF6 1732 aaPredicted RBP22.77■■□□□ 1.24
NOD1-204ENST00000419601 FNBP4Q8N3X1 1017 aaPredicted RBP22.77■■□□□ 1.24
NOD1-204ENST00000419601 NGDNQ8NEJ9 315 aaKnown RBP22.77■■□□□ 1.24
NOD1-204ENST00000419601 QTRT2Q9H974 415 aaKnown RBP22.77■■□□□ 1.24
NOD1-204ENST00000419601 LMOD2Q6P5Q4 547 aa22.76■■□□□ 1.23
NOD1-204ENST00000419601 TOPAZ1Q8N9V7 1692 aa22.75■■□□□ 1.23
NOD1-204ENST00000419601 CDK12Q9NYV4 1490 aaPredicted RBP22.75■■□□□ 1.23
NOD1-204ENST00000419601 USP21Q9UK80 565 aa22.75■■□□□ 1.23
NOD1-204ENST00000419601 NBPF8Q3BBV2 869 aa22.74■■□□□ 1.23
NOD1-204ENST00000419601 CCDC61Q9Y6R9 512 aa22.74■■□□□ 1.23
NOD1-204ENST00000419601 HAP1P54257 671 aaPredicted RBP22.73■■□□□ 1.23
NOD1-204ENST00000419601 RBM6P78332 1123 aaKnown RBP22.73■■□□□ 1.23
NOD1-204ENST00000419601 ALS2Q96Q42 1657 aa22.72■■□□□ 1.23
NOD1-204ENST00000419601 ABCA3Q99758 1704 aa22.71■■□□□ 1.23
NOD1-204ENST00000419601 SRPK2P78362 688 aaKnown RBP22.71■■□□□ 1.23
NOD1-204ENST00000419601 CABLES1Q8TDN4 633 aa22.71■■□□□ 1.23
NOD1-204ENST00000419601 TRPC5Q9UL62 973 aaPredicted RBP22.71■■□□□ 1.23
NOD1-204ENST00000419601 POLR3AO14802 1390 aaPredicted RBP22.7■■□□□ 1.22
NOD1-204ENST00000419601 BCL9LQ86UU0 1499 aa22.69■■□□□ 1.22
NOD1-204ENST00000419601 PLEKHG3A1L390 1219 aa22.69■■□□□ 1.22
NOD1-204ENST00000419601 ATRNO75882 1429 aa22.68■■□□□ 1.22
NOD1-204ENST00000419601 PAK3O75914 559 aaPredicted RBP22.68■■□□□ 1.22
NOD1-204ENST00000419601 PLEKHG5O94827 1062 aa22.68■■□□□ 1.22
NOD1-204ENST00000419601 ACEP12821 1306 aa22.67■■□□□ 1.22
NOD1-204ENST00000419601 CABP2Q9NPB3 220 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms