RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 TRIM52Q96A61 297 aa9.96□□□□□ -0.82
LINC02539-202ENST00000419220 RNF17Q9BXT8 1623 aaKnown RBP9.96□□□□□ -0.82
LINC02539-202ENST00000419220 CLTCQ00610 1675 aaKnown RBP9.96□□□□□ -0.82
LINC02539-202ENST00000419220 HS6ST3Q8IZP7 471 aa9.95□□□□□ -0.82
LINC02539-202ENST00000419220 NPATQ14207 1427 aa9.95□□□□□ -0.82
LINC02539-202ENST00000419220 DPY19L2Q6NUT2 758 aa9.94□□□□□ -0.82
LINC02539-202ENST00000419220 HFM1A2PYH4 1435 aa9.93□□□□□ -0.82
LINC02539-202ENST00000419220 UHRF1BP1Q6BDS2 1440 aa9.93□□□□□ -0.82
LINC02539-202ENST00000419220 NUP155O75694 1391 aa9.93□□□□□ -0.82
LINC02539-202ENST00000419220 HDGFP51858 240 aaKnown RBP9.93□□□□□ -0.82
LINC02539-202ENST00000419220 PDAP1Q13442 181 aaKnown RBP9.93□□□□□ -0.82
LINC02539-202ENST00000419220 SPRYD3Q8NCJ5 442 aa9.93□□□□□ -0.82
LINC02539-202ENST00000419220 SIGLEC1Q9BZZ2 1709 aa9.93□□□□□ -0.82
LINC02539-202ENST00000419220 PTPRKQ15262 1439 aa9.92□□□□□ -0.82
LINC02539-202ENST00000419220 HRCP23327 699 aa9.92□□□□□ -0.82
LINC02539-202ENST00000419220 CEBPAP49715 358 aaPredicted RBP9.92□□□□□ -0.82
LINC02539-202ENST00000419220 TRIM26Q12899 539 aaPredicted RBP9.92□□□□□ -0.82
LINC02539-202ENST00000419220 C3P01024 1663 aa9.92□□□□□ -0.82
LINC02539-202ENST00000419220 PRDM15P57071 1507 aaPredicted RBP9.92□□□□□ -0.82
LINC02539-202ENST00000419220 GCC2Q8IWJ2 1684 aa9.91□□□□□ -0.82
LINC02539-202ENST00000419220 STK25O00506 426 aa9.91□□□□□ -0.82
LINC02539-202ENST00000419220 THEMISQ8N1K5 641 aaPredicted RBP9.91□□□□□ -0.82
LINC02539-202ENST00000419220 SLC52A1Q9NWF4 448 aa9.91□□□□□ -0.82
LINC02539-202ENST00000419220 DEPDC5O75140 1603 aa9.91□□□□□ -0.82
LINC02539-202ENST00000419220 PZPP20742 1482 aa9.91□□□□□ -0.82
LINC02539-202ENST00000419220 NAIPQ13075 1403 aa9.9□□□□□ -0.82
LINC02539-202ENST00000419220 ARHGAP31Q2M1Z3 1444 aa9.9□□□□□ -0.82
LINC02539-202ENST00000419220 SETD5Q9C0A6 1442 aa9.9□□□□□ -0.82
LINC02539-202ENST00000419220 PREX1Q8TCU6 1659 aa9.9□□□□□ -0.82
LINC02539-202ENST00000419220 ABCC3O15438 1527 aa9.9□□□□□ -0.82
LINC02539-202ENST00000419220 RPRD2Q5VT52 1461 aaKnown RBP9.9□□□□□ -0.83
LINC02539-202ENST00000419220 LMTK2Q8IWU2 1503 aa9.89□□□□□ -0.83
LINC02539-202ENST00000419220 VGFO15240 615 aaPredicted RBP9.89□□□□□ -0.83
LINC02539-202ENST00000419220 TNRQ92752 1358 aa9.88□□□□□ -0.83
LINC02539-202ENST00000419220 UNC13BO14795 1591 aa9.88□□□□□ -0.83
LINC02539-202ENST00000419220 CFAP65Q6ZU64 1925 aaKnown RBP9.88□□□□□ -0.83
LINC02539-202ENST00000419220 NLRP1Q9C000 1473 aa9.88□□□□□ -0.83
LINC02539-202ENST00000419220 TAOK2Q9UL54 1235 aa9.88□□□□□ -0.83
LINC02539-202ENST00000419220 CAMSAP1Q5T5Y3 1602 aa9.88□□□□□ -0.83
LINC02539-202ENST00000419220 CEP152O94986 1710 aa9.87□□□□□ -0.83
LINC02539-202ENST00000419220 TET3O43151 1660 aa9.87□□□□□ -0.83
LINC02539-202ENST00000419220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.87□□□□□ -0.83
LINC02539-202ENST00000419220 ZFP91Q96JP5 570 aaPredicted RBP9.87□□□□□ -0.83
LINC02539-202ENST00000419220 CABP2Q9NPB3 220 aa9.87□□□□□ -0.83
LINC02539-202ENST00000419220 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
LINC02539-202ENST00000419220 IQGAP3Q86VI3 1631 aa9.86□□□□□ -0.83
LINC02539-202ENST00000419220 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
LINC02539-202ENST00000419220 EID1Q9Y6B2 187 aa9.86□□□□□ -0.83
LINC02539-202ENST00000419220 VWDEQ8N2E2 1590 aa9.85□□□□□ -0.83
LINC02539-202ENST00000419220 FBXO31Q5XUX0 539 aaPredicted RBP9.85□□□□□ -0.83
LINC02539-202ENST00000419220 ANKRD13DQ6ZTN6 518 aa9.85□□□□□ -0.83
LINC02539-202ENST00000419220 ANKLE2Q86XL3 938 aa9.85□□□□□ -0.83
LINC02539-202ENST00000419220 BCL11BQ9C0K0 894 aaPredicted RBP9.85□□□□□ -0.83
LINC02539-202ENST00000419220 STK24Q9Y6E0 443 aa9.85□□□□□ -0.83
LINC02539-202ENST00000419220 EFCAB6Q5THR3 1501 aa9.84□□□□□ -0.83
LINC02539-202ENST00000419220 VSIG10Q8N0Z9 540 aa9.84□□□□□ -0.83
LINC02539-202ENST00000419220 PLA2G2EQ9NZK7 142 aa9.84□□□□□ -0.83
LINC02539-202ENST00000419220 KDM2AQ9Y2K7 1162 aa9.84□□□□□ -0.83
LINC02539-202ENST00000419220 MROH1Q8NDA8 1641 aa9.84□□□□□ -0.83
LINC02539-202ENST00000419220 A2ML1A8K2U0 1454 aa9.84□□□□□ -0.83
LINC02539-202ENST00000419220 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.83□□□□□ -0.84
LINC02539-202ENST00000419220 MPHOSPH9Q99550 1183 aa9.83□□□□□ -0.84
LINC02539-202ENST00000419220 ERVK-7P63135 1459 aa9.83□□□□□ -0.84
LINC02539-202ENST00000419220 SPATA31D1Q6ZQQ2 1576 aa9.83□□□□□ -0.84
LINC02539-202ENST00000419220 RAB3GAP2Q9H2M9 1393 aa9.82□□□□□ -0.84
LINC02539-202ENST00000419220 UGGT1Q9NYU2 1555 aa9.82□□□□□ -0.84
LINC02539-202ENST00000419220 CEP170BQ9Y4F5 1589 aaPredicted RBP9.81□□□□□ -0.84
LINC02539-202ENST00000419220 GPR153Q6NV75 609 aa9.81□□□□□ -0.84
LINC02539-202ENST00000419220 MYO3AQ8NEV4 1616 aa9.81□□□□□ -0.84
LINC02539-202ENST00000419220 ZNF142P52746 1687 aaPredicted RBP9.8□□□□□ -0.84
LINC02539-202ENST00000419220 LMTK3Q96Q04 1460 aa9.8□□□□□ -0.84
LINC02539-202ENST00000419220 PPP1R15AO75807 674 aaPredicted RBP9.8□□□□□ -0.84
LINC02539-202ENST00000419220 IDI1Q13907 227 aa9.8□□□□□ -0.84
LINC02539-202ENST00000419220 ZNF326Q5BKZ1 582 aaKnown RBP9.8□□□□□ -0.84
LINC02539-202ENST00000419220 BCANQ96GW7 911 aa9.8□□□□□ -0.84
LINC02539-202ENST00000419220 KDM5AP29375 1690 aaKnown RBP9.8□□□□□ -0.84
LINC02539-202ENST00000419220 PLA2R1Q13018 1463 aa9.79□□□□□ -0.84
LINC02539-202ENST00000419220 HSPA2P54652 639 aa9.79□□□□□ -0.84
LINC02539-202ENST00000419220 LSM11P83369 360 aaKnown RBP eCLIP9.79□□□□□ -0.84
LINC02539-202ENST00000419220 NOS1P29475 1434 aa9.79□□□□□ -0.84
LINC02539-202ENST00000419220 E9PCH4 1651 aa9.78□□□□□ -0.84
LINC02539-202ENST00000419220 HCSTQ9UBK5 93 aa9.78□□□□□ -0.84
LINC02539-202ENST00000419220 SPHKAPQ2M3C7 1700 aa9.77□□□□□ -0.85
LINC02539-202ENST00000419220 CCDC144AA2RUR9 1427 aa9.77□□□□□ -0.85
LINC02539-202ENST00000419220 TXNDC2Q86VQ3 553 aa9.77□□□□□ -0.85
LINC02539-202ENST00000419220 RPGRIP1LQ68CZ1 1315 aa9.77□□□□□ -0.85
LINC02539-202ENST00000419220 KIF1BO60333 1816 aa9.77□□□□□ -0.85
LINC02539-202ENST00000419220 GTPBP6O43824 516 aaPredicted RBP9.76□□□□□ -0.85
LINC02539-202ENST00000419220 STAC3Q96MF2 364 aa9.76□□□□□ -0.85
LINC02539-202ENST00000419220 PTPRTO14522 1441 aa9.75□□□□□ -0.85
LINC02539-202ENST00000419220 UBR1Q8IWV7 1749 aa9.74□□□□□ -0.85
LINC02539-202ENST00000419220 TRPM2O94759 1503 aa9.74□□□□□ -0.85
LINC02539-202ENST00000419220 PBX2P40425 430 aa9.74□□□□□ -0.85
LINC02539-202ENST00000419220 PIK3C2BO00750 1634 aa9.74□□□□□ -0.85
LINC02539-202ENST00000419220 TMEM2Q9UHN6 1383 aa9.74□□□□□ -0.85
LINC02539-202ENST00000419220 ADGRB3O60242 1522 aa9.73□□□□□ -0.85
LINC02539-202ENST00000419220 ZNF316A6NFI3 1004 aaPredicted RBP9.73□□□□□ -0.85
LINC02539-202ENST00000419220 NCKAP5LQ9HCH0 1330 aa9.73□□□□□ -0.85
LINC02539-202ENST00000419220 POLR1AO95602 1720 aaPredicted RBP9.73□□□□□ -0.85
LINC02539-202ENST00000419220 MICALL2Q8IY33 904 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms