RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 PLEKHH1Q9ULM0 1364 aa29.57■■■□□ 2.32
GTF3A-202ENST00000419181 SIRT1Q96EB6 747 aa29.56■■■□□ 2.32
GTF3A-202ENST00000419181 NHSL1Q5SYE7 1610 aa29.56■■■□□ 2.32
GTF3A-202ENST00000419181 DLC1Q96QB1 1528 aa29.54■■■□□ 2.32
GTF3A-202ENST00000419181 JCADQ9P266 1359 aa29.51■■■□□ 2.31
GTF3A-202ENST00000419181 SOCS7O14512 581 aa29.49■■■□□ 2.31
GTF3A-202ENST00000419181 KIAA1210Q9ULL0 1709 aa29.47■■■□□ 2.31
GTF3A-202ENST00000419181 FMN2Q9NZ56 1722 aa29.46■■■□□ 2.31
GTF3A-202ENST00000419181 SHPRHQ149N8 1683 aa29.46■■■□□ 2.31
GTF3A-202ENST00000419181 PRAM1Q96QH2 718 aa29.45■■■□□ 2.31
GTF3A-202ENST00000419181 ORAI2Q96SN7 254 aa29.45■■■□□ 2.31
GTF3A-202ENST00000419181 SIN3AQ96ST3 1273 aa29.44■■■□□ 2.3
GTF3A-202ENST00000419181 DDX17Q92841 729 aaKnown RBP29.41■■■□□ 2.3
GTF3A-202ENST00000419181 TRAK1Q9UPV9 953 aa29.41■■■□□ 2.3
GTF3A-202ENST00000419181 ADGRB2O60241 1585 aa29.4■■■□□ 2.3
GTF3A-202ENST00000419181 ARHGEF28Q8N1W1 1705 aaKnown RBP29.4■■■□□ 2.3
GTF3A-202ENST00000419181 SAFB2Q14151 953 aaKnown RBP eCLIP29.39■■■□□ 2.3
GTF3A-202ENST00000419181 L3MBTL2Q969R5 705 aa29.39■■■□□ 2.3
GTF3A-202ENST00000419181 POGKQ9P215 609 aa29.39■■■□□ 2.3
GTF3A-202ENST00000419181 SPATA31A6Q5VVP1 1343 aa29.38■■■□□ 2.29
GTF3A-202ENST00000419181 NEUROD1Q13562 356 aa29.36■■■□□ 2.29
GTF3A-202ENST00000419181 ESCO1Q5FWF5 840 aa29.36■■■□□ 2.29
GTF3A-202ENST00000419181 NUTM2FA1L443 756 aa29.35■■■□□ 2.29
GTF3A-202ENST00000419181 LRRC59Q96AG4 307 aaKnown RBP29.35■■■□□ 2.29
GTF3A-202ENST00000419181 SOS2Q07890 1332 aaPredicted RBP29.34■■■□□ 2.29
GTF3A-202ENST00000419181 LRP6O75581 1613 aa29.34■■■□□ 2.29
GTF3A-202ENST00000419181 RGPD8O14715 1765 aaPredicted RBP29.33■■■□□ 2.29
GTF3A-202ENST00000419181 KIF1AQ12756 1690 aa29.32■■■□□ 2.28
GTF3A-202ENST00000419181 RGS17Q9UGC6 210 aaPredicted RBP29.32■■■□□ 2.28
GTF3A-202ENST00000419181 NPHP3Q7Z494 1330 aa29.3■■■□□ 2.28
GTF3A-202ENST00000419181 NBPF1Q3BBV0 1214 aa29.3■■■□□ 2.28
GTF3A-202ENST00000419181 PXDNQ92626 1479 aa29.29■■■□□ 2.28
GTF3A-202ENST00000419181 PNPLA6Q8IY17 1366 aa29.29■■■□□ 2.28
GTF3A-202ENST00000419181 USP32Q8NFA0 1604 aa29.29■■■□□ 2.28
GTF3A-202ENST00000419181 TRPM1Q7Z4N2 1603 aa29.27■■■□□ 2.28
GTF3A-202ENST00000419181 MINK1Q8N4C8 1332 aaPredicted RBP29.27■■■□□ 2.28
GTF3A-202ENST00000419181 ANKARQ7Z5J8 1434 aa29.27■■■□□ 2.28
GTF3A-202ENST00000419181 FOXO3O43524 673 aa29.26■■■□□ 2.27
GTF3A-202ENST00000419181 HIRIP3Q9BW71 556 aaPredicted RBP29.26■■■□□ 2.27
GTF3A-202ENST00000419181 MEX3CQ5U5Q3 659 aaKnown RBP29.25■■■□□ 2.27
GTF3A-202ENST00000419181 TULP4Q9NRJ4 1543 aa29.23■■■□□ 2.27
GTF3A-202ENST00000419181 EIF3AQ14152 1382 aaKnown RBP29.22■■■□□ 2.27
GTF3A-202ENST00000419181 COL22A1Q8NFW1 1626 aaPredicted RBP29.21■■■□□ 2.27
GTF3A-202ENST00000419181 WASLO00401 505 aaPredicted RBP29.21■■■□□ 2.27
GTF3A-202ENST00000419181 NUTM2BA6NNL0 878 aaPredicted RBP29.2■■■□□ 2.26
GTF3A-202ENST00000419181 NUTM2EB1AL46 878 aaPredicted RBP29.2■■■□□ 2.26
GTF3A-202ENST00000419181 XPCQ01831 940 aaPredicted RBP29.2■■■□□ 2.26
GTF3A-202ENST00000419181 NUTM2AQ8IVF1 878 aaPredicted RBP29.2■■■□□ 2.26
GTF3A-202ENST00000419181 PHF8Q9UPP1 1060 aa29.2■■■□□ 2.26
GTF3A-202ENST00000419181 POTEAQ6S8J7 498 aa29.19■■■□□ 2.26
GTF3A-202ENST00000419181 PRR36Q9H6K5 1346 aa29.18■■■□□ 2.26
GTF3A-202ENST00000419181 TONSLQ96HA7 1378 aa29.16■■■□□ 2.26
GTF3A-202ENST00000419181 ATP7BP35670 1465 aa29.13■■■□□ 2.25
GTF3A-202ENST00000419181 NBPF8Q3BBV2 869 aa29.13■■■□□ 2.25
GTF3A-202ENST00000419181 ITSN1Q15811 1721 aa29.13■■■□□ 2.25
GTF3A-202ENST00000419181 ROCK2O75116 1388 aaKnown RBP29.13■■■□□ 2.25
GTF3A-202ENST00000419181 QRICH2Q9H0J4 1663 aa29.12■■■□□ 2.25
GTF3A-202ENST00000419181 KRT28Q7Z3Y7 464 aa29.12■■■□□ 2.25
GTF3A-202ENST00000419181 CENPJQ9HC77 1338 aaPredicted RBP29.12■■■□□ 2.25
GTF3A-202ENST00000419181 SPATA31A3Q5VYP0 1347 aa29.11■■■□□ 2.25
GTF3A-202ENST00000419181 PMFBP1Q8TBY8 1022 aa29.1■■■□□ 2.25
GTF3A-202ENST00000419181 GPRASP1Q5JY77 1395 aa29.1■■■□□ 2.25
GTF3A-202ENST00000419181 PCGF6Q9BYE7 350 aa29.09■■■□□ 2.25
GTF3A-202ENST00000419181 ZNF772Q68DY9 489 aaPredicted RBP29.08■■■□□ 2.25
GTF3A-202ENST00000419181 CDK19Q9BWU1 502 aa29.08■■■□□ 2.25
GTF3A-202ENST00000419181 TOPAZ1Q8N9V7 1692 aa29.08■■■□□ 2.25
GTF3A-202ENST00000419181 PSME1Q06323 249 aa29.07■■■□□ 2.24
GTF3A-202ENST00000419181 TNS3Q68CZ2 1445 aa29.07■■■□□ 2.24
GTF3A-202ENST00000419181 SBNO1A3KN83 1393 aa29.06■■■□□ 2.24
GTF3A-202ENST00000419181 NUDT16Q96DE0 195 aaKnown RBP29.06■■■□□ 2.24
GTF3A-202ENST00000419181 TRPM3Q9HCF6 1732 aaPredicted RBP29.06■■■□□ 2.24
GTF3A-202ENST00000419181 RALGAPBQ86X10 1494 aa29.04■■■□□ 2.24
GTF3A-202ENST00000419181 ADAMTS2O95450 1211 aa29.04■■■□□ 2.24
GTF3A-202ENST00000419181 AFF2P51816 1311 aa29.03■■■□□ 2.24
GTF3A-202ENST00000419181 C8orf37Q96NL8 207 aa29.03■■■□□ 2.24
GTF3A-202ENST00000419181 MARF1Q9Y4F3 1742 aaKnown RBP29.03■■■□□ 2.24
GTF3A-202ENST00000419181 ALS2Q96Q42 1657 aa28.99■■■□□ 2.23
GTF3A-202ENST00000419181 ARHGEF10O15013 1369 aa28.99■■■□□ 2.23
GTF3A-202ENST00000419181 NGDNQ8NEJ9 315 aaKnown RBP28.98■■■□□ 2.23
GTF3A-202ENST00000419181 CCDC61Q9Y6R9 512 aa28.98■■■□□ 2.23
GTF3A-202ENST00000419181 ABCA3Q99758 1704 aa28.97■■■□□ 2.23
GTF3A-202ENST00000419181 SRPK2P78362 688 aaKnown RBP28.96■■■□□ 2.23
GTF3A-202ENST00000419181 NGLY1Q96IV0 654 aa28.96■■■□□ 2.23
GTF3A-202ENST00000419181 POLR3AO14802 1390 aaPredicted RBP28.96■■■□□ 2.23
GTF3A-202ENST00000419181 CLSPNQ9HAW4 1339 aa28.95■■■□□ 2.23
GTF3A-202ENST00000419181 CARD11Q9BXL7 1154 aa28.95■■■□□ 2.22
GTF3A-202ENST00000419181 PLEKHG3A1L390 1219 aa28.93■■■□□ 2.22
GTF3A-202ENST00000419181 CABP2Q9NPB3 220 aa28.93■■■□□ 2.22
GTF3A-202ENST00000419181 LMOD2Q6P5Q4 547 aa28.92■■■□□ 2.22
GTF3A-202ENST00000419181 FNBP4Q8N3X1 1017 aaPredicted RBP28.92■■■□□ 2.22
GTF3A-202ENST00000419181 RXRBP28702 533 aa28.91■■■□□ 2.22
GTF3A-202ENST00000419181 PPIP5K1Q6PFW1 1433 aa28.91■■■□□ 2.22
GTF3A-202ENST00000419181 ACEP12821 1306 aa28.91■■■□□ 2.22
GTF3A-202ENST00000419181 EVC2Q86UK5 1308 aa28.91■■■□□ 2.22
GTF3A-202ENST00000419181 SBNO2Q9Y2G9 1366 aa28.9■■■□□ 2.22
GTF3A-202ENST00000419181 CABLES1Q8TDN4 633 aa28.89■■■□□ 2.22
GTF3A-202ENST00000419181 CRYBG1Q9Y4K1 1723 aa28.88■■■□□ 2.21
GTF3A-202ENST00000419181 USP21Q9UK80 565 aa28.87■■■□□ 2.21
GTF3A-202ENST00000419181 QTRT2Q9H974 415 aaKnown RBP28.86■■■□□ 2.21
GTF3A-202ENST00000419181 PAK3O75914 559 aaPredicted RBP28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms