RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 CLSPNQ9HAW4 1339 aa19.2■□□□□ 0.66
TMEM248-203ENST00000418375 NALCNQ8IZF0 1738 aa19.2■□□□□ 0.66
TMEM248-203ENST00000418375 LRPPRCP42704 1394 aaKnown RBP19.19■□□□□ 0.66
TMEM248-203ENST00000418375 LRRC59Q96AG4 307 aaKnown RBP19.19■□□□□ 0.66
TMEM248-203ENST00000418375 C1orf167Q5SNV9 1468 aa19.19■□□□□ 0.66
TMEM248-203ENST00000418375 TONSLQ96HA7 1378 aa19.19■□□□□ 0.66
TMEM248-203ENST00000418375 DDX17Q92841 729 aaKnown RBP19.18■□□□□ 0.66
TMEM248-203ENST00000418375 STK26Q9P289 416 aa19.18■□□□□ 0.66
TMEM248-203ENST00000418375 SHPRHQ149N8 1683 aa19.17■□□□□ 0.66
TMEM248-203ENST00000418375 NUTM2BA6NNL0 878 aaPredicted RBP19.17■□□□□ 0.66
TMEM248-203ENST00000418375 NUTM2EB1AL46 878 aaPredicted RBP19.17■□□□□ 0.66
TMEM248-203ENST00000418375 NUTM2AQ8IVF1 878 aaPredicted RBP19.17■□□□□ 0.66
TMEM248-203ENST00000418375 ABCC11Q96J66 1382 aa19.17■□□□□ 0.66
TMEM248-203ENST00000418375 YTHDC2Q9H6S0 1430 aaKnown RBP19.17■□□□□ 0.66
TMEM248-203ENST00000418375 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
TMEM248-203ENST00000418375 NHSL1Q5SYE7 1610 aa19.15■□□□□ 0.66
TMEM248-203ENST00000418375 ZNF772Q68DY9 489 aaPredicted RBP19.15■□□□□ 0.66
TMEM248-203ENST00000418375 TECPR2O15040 1411 aa19.15■□□□□ 0.66
TMEM248-203ENST00000418375 ORAI2Q96SN7 254 aa19.14■□□□□ 0.65
TMEM248-203ENST00000418375 SIRT1Q96EB6 747 aa19.12■□□□□ 0.65
TMEM248-203ENST00000418375 PNPLA6Q8IY17 1366 aa19.11■□□□□ 0.65
TMEM248-203ENST00000418375 ADGRB1O14514 1584 aa19.1■□□□□ 0.65
TMEM248-203ENST00000418375 WAPLQ7Z5K2 1190 aa19.1■□□□□ 0.65
TMEM248-203ENST00000418375 SOS2Q07890 1332 aaPredicted RBP19.09■□□□□ 0.65
TMEM248-203ENST00000418375 KNDC1Q76NI1 1749 aa19.08■□□□□ 0.65
TMEM248-203ENST00000418375 TRAK1Q9UPV9 953 aa19.08■□□□□ 0.64
TMEM248-203ENST00000418375 CDC42BPGQ6DT37 1551 aa19.07■□□□□ 0.64
TMEM248-203ENST00000418375 AFF2P51816 1311 aa19.07■□□□□ 0.64
TMEM248-203ENST00000418375 ESCO1Q5FWF5 840 aa19.07■□□□□ 0.64
TMEM248-203ENST00000418375 TIMELESSQ9UNS1 1208 aa19.07■□□□□ 0.64
TMEM248-203ENST00000418375 KIAA1210Q9ULL0 1709 aa19.07■□□□□ 0.64
TMEM248-203ENST00000418375 DLC1Q96QB1 1528 aa19.06■□□□□ 0.64
TMEM248-203ENST00000418375 NBPF1Q3BBV0 1214 aa19.06■□□□□ 0.64
TMEM248-203ENST00000418375 PRAM1Q96QH2 718 aa19.06■□□□□ 0.64
TMEM248-203ENST00000418375 POGKQ9P215 609 aa19.06■□□□□ 0.64
TMEM248-203ENST00000418375 PLEKHH1Q9ULM0 1364 aa19.06■□□□□ 0.64
TMEM248-203ENST00000418375 C8orf37Q96NL8 207 aa19.05■□□□□ 0.64
TMEM248-203ENST00000418375 NPHP3Q7Z494 1330 aa19.04■□□□□ 0.64
TMEM248-203ENST00000418375 RXRBP28702 533 aa19.04■□□□□ 0.64
TMEM248-203ENST00000418375 NUTM2FA1L443 756 aa19.03■□□□□ 0.64
TMEM248-203ENST00000418375 NBPF8Q3BBV2 869 aa19.03■□□□□ 0.64
TMEM248-203ENST00000418375 ROCK2O75116 1388 aaKnown RBP19.03■□□□□ 0.64
TMEM248-203ENST00000418375 ADAMTS2O95450 1211 aa19.02■□□□□ 0.64
TMEM248-203ENST00000418375 SAFB2Q14151 953 aaKnown RBP eCLIP19.02■□□□□ 0.64
TMEM248-203ENST00000418375 FOXO3O43524 673 aa19.01■□□□□ 0.63
TMEM248-203ENST00000418375 NGLY1Q96IV0 654 aa19■□□□□ 0.63
TMEM248-203ENST00000418375 TRPM1Q7Z4N2 1603 aa18.99■□□□□ 0.63
TMEM248-203ENST00000418375 XPCQ01831 940 aaPredicted RBP18.98■□□□□ 0.63
TMEM248-203ENST00000418375 QTRT2Q9H974 415 aaKnown RBP18.98■□□□□ 0.63
TMEM248-203ENST00000418375 RALGAPBQ86X10 1494 aa18.97■□□□□ 0.63
TMEM248-203ENST00000418375 PXDNQ92626 1479 aa18.97■□□□□ 0.63
TMEM248-203ENST00000418375 GPRASP1Q5JY77 1395 aa18.96■□□□□ 0.63
TMEM248-203ENST00000418375 CDK12Q9NYV4 1490 aaPredicted RBP18.96■□□□□ 0.63
TMEM248-203ENST00000418375 RBM6P78332 1123 aaKnown RBP18.95■□□□□ 0.62
TMEM248-203ENST00000418375 CARD11Q9BXL7 1154 aa18.95■□□□□ 0.62
TMEM248-203ENST00000418375 MINK1Q8N4C8 1332 aaPredicted RBP18.95■□□□□ 0.62
TMEM248-203ENST00000418375 CENPJQ9HC77 1338 aaPredicted RBP18.94■□□□□ 0.62
TMEM248-203ENST00000418375 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
TMEM248-203ENST00000418375 HIRIP3Q9BW71 556 aaPredicted RBP18.93■□□□□ 0.62
TMEM248-203ENST00000418375 USP21Q9UK80 565 aa18.93■□□□□ 0.62
TMEM248-203ENST00000418375 ARHGEF28Q8N1W1 1705 aaKnown RBP18.93■□□□□ 0.62
TMEM248-203ENST00000418375 FMN2Q9NZ56 1722 aa18.93■□□□□ 0.62
TMEM248-203ENST00000418375 COL22A1Q8NFW1 1626 aaPredicted RBP18.92■□□□□ 0.62
TMEM248-203ENST00000418375 UPF1Q92900 1129 aaKnown RBP eCLIP18.92■□□□□ 0.62
TMEM248-203ENST00000418375 PHF8Q9UPP1 1060 aa18.92■□□□□ 0.62
TMEM248-203ENST00000418375 KRT28Q7Z3Y7 464 aa18.91■□□□□ 0.62
TMEM248-203ENST00000418375 FNBP4Q8N3X1 1017 aaPredicted RBP18.91■□□□□ 0.62
TMEM248-203ENST00000418375 ADGRB2O60241 1585 aa18.9■□□□□ 0.62
TMEM248-203ENST00000418375 WASLO00401 505 aaPredicted RBP18.9■□□□□ 0.62
TMEM248-203ENST00000418375 TRPC5Q9UL62 973 aaPredicted RBP18.9■□□□□ 0.62
TMEM248-203ENST00000418375 SPATA31A3Q5VYP0 1347 aa18.9■□□□□ 0.62
TMEM248-203ENST00000418375 KIF1AQ12756 1690 aa18.89■□□□□ 0.61
TMEM248-203ENST00000418375 RGS12O14924 1447 aa18.89■□□□□ 0.61
TMEM248-203ENST00000418375 PSME1Q06323 249 aa18.88■□□□□ 0.61
TMEM248-203ENST00000418375 ANKARQ7Z5J8 1434 aa18.87■□□□□ 0.61
TMEM248-203ENST00000418375 CDK19Q9BWU1 502 aa18.85■□□□□ 0.61
TMEM248-203ENST00000418375 ATRNO75882 1429 aa18.84■□□□□ 0.61
TMEM248-203ENST00000418375 PMFBP1Q8TBY8 1022 aa18.84■□□□□ 0.61
TMEM248-203ENST00000418375 TULP4Q9NRJ4 1543 aa18.84■□□□□ 0.61
TMEM248-203ENST00000418375 TNS3Q68CZ2 1445 aa18.83■□□□□ 0.61
TMEM248-203ENST00000418375 BCL9LQ86UU0 1499 aa18.83■□□□□ 0.6
TMEM248-203ENST00000418375 SBNO1A3KN83 1393 aa18.82■□□□□ 0.6
TMEM248-203ENST00000418375 EVC2Q86UK5 1308 aa18.82■□□□□ 0.6
TMEM248-203ENST00000418375 HAP1P54257 671 aaPredicted RBP18.82■□□□□ 0.6
TMEM248-203ENST00000418375 LMOD2Q6P5Q4 547 aa18.82■□□□□ 0.6
TMEM248-203ENST00000418375 SRPK2P78362 688 aaKnown RBP18.81■□□□□ 0.6
TMEM248-203ENST00000418375 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
TMEM248-203ENST00000418375 QRICH2Q9H0J4 1663 aa18.81■□□□□ 0.6
TMEM248-203ENST00000418375 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
TMEM248-203ENST00000418375 PRR36Q9H6K5 1346 aa18.8■□□□□ 0.6
TMEM248-203ENST00000418375 ARHGEF10O15013 1369 aa18.8■□□□□ 0.6
TMEM248-203ENST00000418375 RGPD8O14715 1765 aaPredicted RBP18.79■□□□□ 0.6
TMEM248-203ENST00000418375 PLEKHG5O94827 1062 aa18.79■□□□□ 0.6
TMEM248-203ENST00000418375 CABLES1Q8TDN4 633 aa18.79■□□□□ 0.6
TMEM248-203ENST00000418375 USP47Q96K76 1375 aa18.79■□□□□ 0.6
TMEM248-203ENST00000418375 USP32Q8NFA0 1604 aa18.78■□□□□ 0.6
TMEM248-203ENST00000418375 SLC24A1O60721 1099 aa18.78■□□□□ 0.6
TMEM248-203ENST00000418375 UNC5CLQ8IV45 518 aa18.78■□□□□ 0.6
TMEM248-203ENST00000418375 GJD4Q96KN9 370 aaPredicted RBP18.78■□□□□ 0.6
TMEM248-203ENST00000418375 CCDC61Q9Y6R9 512 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms