RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 XRCC6P12956 609 aaKnown RBP eCLIP7.62□□□□□ -1.19
NPHP1-204ENST00000417665 PNISRQ8TF01 805 aaKnown RBP7.62□□□□□ -1.19
NPHP1-204ENST00000417665 KIF7Q2M1P5 1343 aa7.61□□□□□ -1.19
NPHP1-204ENST00000417665 FSD2A1L4K1 749 aa7.61□□□□□ -1.19
NPHP1-204ENST00000417665 LTKP29376 864 aa7.61□□□□□ -1.19
NPHP1-204ENST00000417665 MAP7D2Q96T17 732 aa7.61□□□□□ -1.19
NPHP1-204ENST00000417665 CCDC141Q6ZP82 1450 aa7.61□□□□□ -1.19
NPHP1-204ENST00000417665 BECN1Q14457 450 aa7.6□□□□□ -1.19
NPHP1-204ENST00000417665 CENPQQ7L2Z9 268 aaPredicted RBP7.6□□□□□ -1.19
NPHP1-204ENST00000417665 TMEM94Q12767 1356 aa7.6□□□□□ -1.19
NPHP1-204ENST00000417665 LRPPRCP42704 1394 aaKnown RBP7.6□□□□□ -1.19
NPHP1-204ENST00000417665 C8orf34Q49A92 452 aa7.6□□□□□ -1.19
NPHP1-204ENST00000417665 JCADQ9P266 1359 aa7.59□□□□□ -1.19
NPHP1-204ENST00000417665 ESPNB1AK53 854 aa7.59□□□□□ -1.19
NPHP1-204ENST00000417665 MRE11P49959 708 aa7.59□□□□□ -1.19
NPHP1-204ENST00000417665 TMC1Q8TDI8 760 aa7.59□□□□□ -1.19
NPHP1-204ENST00000417665 ISY1Q9ULR0 285 aaKnown RBP7.59□□□□□ -1.19
NPHP1-204ENST00000417665 CAMSAP2Q08AD1 1489 aa7.59□□□□□ -1.19
NPHP1-204ENST00000417665 MTUS2Q5JR59 1369 aa7.59□□□□□ -1.19
NPHP1-204ENST00000417665 TXNDC2Q86VQ3 553 aa7.59□□□□□ -1.19
NPHP1-204ENST00000417665 NAIPQ13075 1403 aa7.58□□□□□ -1.2
NPHP1-204ENST00000417665 SPATA31E1Q6ZUB1 1445 aa7.58□□□□□ -1.2
NPHP1-204ENST00000417665 FGD6Q6ZV73 1430 aa7.58□□□□□ -1.2
NPHP1-204ENST00000417665 KDM2BQ8NHM5 1336 aa7.58□□□□□ -1.2
NPHP1-204ENST00000417665 PHLPP1O60346 1717 aa7.58□□□□□ -1.2
NPHP1-204ENST00000417665 RSPH4AQ5TD94 716 aa7.58□□□□□ -1.2
NPHP1-204ENST00000417665 LRP6O75581 1613 aa7.58□□□□□ -1.2
NPHP1-204ENST00000417665 MROH1Q8NDA8 1641 aa7.58□□□□□ -1.2
NPHP1-204ENST00000417665 KCNA6P17658 529 aa7.58□□□□□ -1.2
NPHP1-204ENST00000417665 BRD4O60885 1362 aaPredicted RBP7.57□□□□□ -1.2
NPHP1-204ENST00000417665 CFAP65Q6ZU64 1925 aaKnown RBP7.57□□□□□ -1.2
NPHP1-204ENST00000417665 COL16A1Q07092 1604 aaPredicted RBP7.57□□□□□ -1.2
NPHP1-204ENST00000417665 TERF1P54274 439 aa7.57□□□□□ -1.2
NPHP1-204ENST00000417665 SMAP1Q8IYB5 467 aaPredicted RBP7.57□□□□□ -1.2
NPHP1-204ENST00000417665 MYH16Q9H6N6 1097 aa7.57□□□□□ -1.2
NPHP1-204ENST00000417665 PRDM15P57071 1507 aaPredicted RBP7.57□□□□□ -1.2
NPHP1-204ENST00000417665 CDK12Q9NYV4 1490 aaPredicted RBP7.57□□□□□ -1.2
NPHP1-204ENST00000417665 ARHGEF5Q12774 1597 aa7.57□□□□□ -1.2
NPHP1-204ENST00000417665 EHBP1L1Q8N3D4 1523 aa7.56□□□□□ -1.2
NPHP1-204ENST00000417665 NCLP19338 710 aaKnown RBP7.56□□□□□ -1.2
NPHP1-204ENST00000417665 RGS3P49796 1198 aa7.56□□□□□ -1.2
NPHP1-204ENST00000417665 ZNF772Q68DY9 489 aaPredicted RBP7.56□□□□□ -1.2
NPHP1-204ENST00000417665 CRBNQ96SW2 442 aa7.56□□□□□ -1.2
NPHP1-204ENST00000417665 NKTRP30414 1462 aaKnown RBP7.56□□□□□ -1.2
NPHP1-204ENST00000417665 MYOM3Q5VTT5 1437 aa7.56□□□□□ -1.2
NPHP1-204ENST00000417665 EIF2AK4Q9P2K8 1649 aaKnown RBP7.56□□□□□ -1.2
NPHP1-204ENST00000417665 NWD1Q149M9 1564 aa7.56□□□□□ -1.2
NPHP1-204ENST00000417665 ROCK2O75116 1388 aaKnown RBP7.56□□□□□ -1.2
NPHP1-204ENST00000417665 TMEM2Q9UHN6 1383 aa7.56□□□□□ -1.2
NPHP1-204ENST00000417665 TET3O43151 1660 aa7.56□□□□□ -1.2
NPHP1-204ENST00000417665 HOXD11P31277 338 aaPredicted RBP7.56□□□□□ -1.2
NPHP1-204ENST00000417665 TRIM44Q96DX7 344 aaPredicted RBP7.56□□□□□ -1.2
NPHP1-204ENST00000417665 EID1Q9Y6B2 187 aa7.56□□□□□ -1.2
NPHP1-204ENST00000417665 SPATA31A6Q5VVP1 1343 aa7.55□□□□□ -1.2
NPHP1-204ENST00000417665 MTERF4Q7Z6M4 381 aaKnown RBP7.55□□□□□ -1.2
NPHP1-204ENST00000417665 L3MBTL2Q969R5 705 aa7.55□□□□□ -1.2
NPHP1-204ENST00000417665 ARHGAP31Q2M1Z3 1444 aa7.55□□□□□ -1.2
NPHP1-204ENST00000417665 CEP152O94986 1710 aa7.55□□□□□ -1.2
NPHP1-204ENST00000417665 PROSER2Q86WR7 435 aaPredicted RBP7.55□□□□□ -1.2
NPHP1-204ENST00000417665 SLAIN2Q9P270 581 aa7.55□□□□□ -1.2
NPHP1-204ENST00000417665 KDM5AP29375 1690 aaKnown RBP7.55□□□□□ -1.2
NPHP1-204ENST00000417665 PANK2Q9BZ23 570 aa7.54□□□□□ -1.2
NPHP1-204ENST00000417665 PIK3C2BO00750 1634 aa7.54□□□□□ -1.2
NPHP1-204ENST00000417665 MSH6P52701 1360 aa7.54□□□□□ -1.2
NPHP1-204ENST00000417665 MAST1Q9Y2H9 1570 aa7.54□□□□□ -1.2
NPHP1-204ENST00000417665 PDIA4P13667 645 aaKnown RBP7.54□□□□□ -1.2
NPHP1-204ENST00000417665 AMER1Q5JTC6 1135 aaPredicted RBP7.54□□□□□ -1.2
NPHP1-204ENST00000417665 KIAA1211Q6ZU35 1233 aa7.54□□□□□ -1.2
NPHP1-204ENST00000417665 SKAP1Q86WV1 359 aa7.54□□□□□ -1.2
NPHP1-204ENST00000417665 KIF15Q9NS87 1388 aa7.53□□□□□ -1.2
NPHP1-204ENST00000417665 SHPRHQ149N8 1683 aa7.53□□□□□ -1.2
NPHP1-204ENST00000417665 MYBBP1AQ9BQG0 1328 aaKnown RBP7.53□□□□□ -1.2
NPHP1-204ENST00000417665 RXRBP28702 533 aa7.53□□□□□ -1.2
NPHP1-204ENST00000417665 RALBP1Q15311 655 aa7.53□□□□□ -1.2
NPHP1-204ENST00000417665 RBM33Q96EV2 1170 aaKnown RBP7.53□□□□□ -1.2
NPHP1-204ENST00000417665 ANTXR1Q9H6X2 564 aa7.53□□□□□ -1.2
NPHP1-204ENST00000417665 GRPEL1Q9HAV7 217 aa7.53□□□□□ -1.2
NPHP1-204ENST00000417665 INSRP06213 1382 aa7.53□□□□□ -1.2
NPHP1-204ENST00000417665 MCM4P33991 863 aa7.52□□□□□ -1.2
NPHP1-204ENST00000417665 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.52□□□□□ -1.2
NPHP1-204ENST00000417665 AHDC1Q5TGY3 1603 aaPredicted RBP7.52□□□□□ -1.21
NPHP1-204ENST00000417665 TSPY4P0CV99 314 aa7.52□□□□□ -1.21
NPHP1-204ENST00000417665 TSPY10P0CW01 314 aa7.52□□□□□ -1.21
NPHP1-204ENST00000417665 UTP14CQ5TAP6 766 aaKnown RBP7.52□□□□□ -1.21
NPHP1-204ENST00000417665 ARXQ96QS3 562 aa7.52□□□□□ -1.21
NPHP1-204ENST00000417665 SLKQ9H2G2 1235 aaPredicted RBP7.52□□□□□ -1.21
NPHP1-204ENST00000417665 EFCAB6Q5THR3 1501 aa7.52□□□□□ -1.21
NPHP1-204ENST00000417665 ERBB4Q15303 1308 aa7.52□□□□□ -1.21
NPHP1-204ENST00000417665 MEX3CQ5U5Q3 659 aaKnown RBP7.51□□□□□ -1.21
NPHP1-204ENST00000417665 SLC26A8Q96RN1 970 aa7.51□□□□□ -1.21
NPHP1-204ENST00000417665 RPRD2Q5VT52 1461 aaKnown RBP7.51□□□□□ -1.21
NPHP1-204ENST00000417665 PLIN1O60240 522 aa7.51□□□□□ -1.21
NPHP1-204ENST00000417665 OFD1O75665 1012 aa7.51□□□□□ -1.21
NPHP1-204ENST00000417665 NBPF8Q3BBV2 869 aa7.51□□□□□ -1.21
NPHP1-204ENST00000417665 VIRMAQ69YN4 1812 aaKnown RBP7.51□□□□□ -1.21
NPHP1-204ENST00000417665 USP19O94966 1318 aa7.5□□□□□ -1.21
NPHP1-204ENST00000417665 GCC2Q8IWJ2 1684 aa7.5□□□□□ -1.21
NPHP1-204ENST00000417665 TRAK2O60296 914 aa7.5□□□□□ -1.21
NPHP1-204ENST00000417665 DIP2AQ14689 1571 aa7.5□□□□□ -1.21
NPHP1-204ENST00000417665 NCOA3Q9Y6Q9 1424 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms