RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 TIAM1Q13009 1591 aa9.08□□□□□ -0.96
ECHDC1-206ENST00000417628 HRCP23327 699 aa9.08□□□□□ -0.96
ECHDC1-206ENST00000417628 DPY19L2Q6NUT2 758 aa9.08□□□□□ -0.96
ECHDC1-206ENST00000417628 TRIM35Q9UPQ4 493 aa9.08□□□□□ -0.96
ECHDC1-206ENST00000417628 A2MP01023 1474 aa9.08□□□□□ -0.96
ECHDC1-206ENST00000417628 SAMD9LQ8IVG5 1584 aa9.07□□□□□ -0.96
ECHDC1-206ENST00000417628 AHDC1Q5TGY3 1603 aaPredicted RBP9.07□□□□□ -0.96
ECHDC1-206ENST00000417628 TULP1O00294 542 aaPredicted RBP9.07□□□□□ -0.96
ECHDC1-206ENST00000417628 FBXO31Q5XUX0 539 aaPredicted RBP9.07□□□□□ -0.96
ECHDC1-206ENST00000417628 ZC3H15Q8WU90 426 aaKnown RBP9.07□□□□□ -0.96
ECHDC1-206ENST00000417628 SLAIN2Q9P270 581 aa9.07□□□□□ -0.96
ECHDC1-206ENST00000417628 MSH6P52701 1360 aa9.07□□□□□ -0.96
ECHDC1-206ENST00000417628 SCAF11Q99590 1463 aaKnown RBP9.07□□□□□ -0.96
ECHDC1-206ENST00000417628 BLMP54132 1417 aaPredicted RBP9.06□□□□□ -0.96
ECHDC1-206ENST00000417628 MIA2Q96PC5 1412 aa9.06□□□□□ -0.96
ECHDC1-206ENST00000417628 C1QTNF8P60827 252 aa9.06□□□□□ -0.96
ECHDC1-206ENST00000417628 BCL9LQ86UU0 1499 aa9.06□□□□□ -0.96
ECHDC1-206ENST00000417628 ABCC3O15438 1527 aa9.05□□□□□ -0.96
ECHDC1-206ENST00000417628 C8orf37Q96NL8 207 aa9.05□□□□□ -0.96
ECHDC1-206ENST00000417628 GPHNQ9NQX3 736 aaPredicted RBP9.05□□□□□ -0.96
ECHDC1-206ENST00000417628 PRDM15P57071 1507 aaPredicted RBP9.05□□□□□ -0.96
ECHDC1-206ENST00000417628 DIP2AQ14689 1571 aa9.04□□□□□ -0.96
ECHDC1-206ENST00000417628 PSDA5PKW4 1024 aaPredicted RBP9.04□□□□□ -0.96
ECHDC1-206ENST00000417628 SLC34A2O95436 690 aa9.04□□□□□ -0.96
ECHDC1-206ENST00000417628 PRXQ9BXM0 1461 aa9.03□□□□□ -0.96
ECHDC1-206ENST00000417628 PREX2Q70Z35 1606 aa9.03□□□□□ -0.96
ECHDC1-206ENST00000417628 PPP1R15BQ5SWA1 713 aa9.03□□□□□ -0.96
ECHDC1-206ENST00000417628 PDCD7Q8N8D1 485 aaKnown RBP9.03□□□□□ -0.96
ECHDC1-206ENST00000417628 SPAG9O60271 1321 aaKnown RBP9.03□□□□□ -0.96
ECHDC1-206ENST00000417628 CDC42BPBQ9Y5S2 1711 aa9.02□□□□□ -0.96
ECHDC1-206ENST00000417628 NKTRP30414 1462 aaKnown RBP9.02□□□□□ -0.96
ECHDC1-206ENST00000417628 ATN1P54259 1190 aaPredicted RBP9.02□□□□□ -0.97
ECHDC1-206ENST00000417628 PROSER2Q86WR7 435 aaPredicted RBP9.02□□□□□ -0.97
ECHDC1-206ENST00000417628 ZNF784Q8NCA9 323 aaPredicted RBP9.02□□□□□ -0.97
ECHDC1-206ENST00000417628 INO80Q9ULG1 1556 aaPredicted RBP9.02□□□□□ -0.97
ECHDC1-206ENST00000417628 CLIP1P30622 1438 aa9.01□□□□□ -0.97
ECHDC1-206ENST00000417628 DEFB132Q7Z7B7 95 aa9.01□□□□□ -0.97
ECHDC1-206ENST00000417628 MICALL2Q8IY33 904 aa9.01□□□□□ -0.97
ECHDC1-206ENST00000417628 KDM5AP29375 1690 aaKnown RBP9□□□□□ -0.97
ECHDC1-206ENST00000417628 ATMINO43313 823 aaPredicted RBP9□□□□□ -0.97
ECHDC1-206ENST00000417628 CLCN6P51797 869 aa9□□□□□ -0.97
ECHDC1-206ENST00000417628 SF3B2Q13435 895 aaKnown RBP9□□□□□ -0.97
ECHDC1-206ENST00000417628 TROQ12816 1431 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-206ENST00000417628 KCNA6P17658 529 aa8.99□□□□□ -0.97
ECHDC1-206ENST00000417628 IRX5P78411 483 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-206ENST00000417628 DSG2Q14126 1118 aa8.99□□□□□ -0.97
ECHDC1-206ENST00000417628 SMYD5Q6GMV2 418 aa8.99□□□□□ -0.97
ECHDC1-206ENST00000417628 EMILIN3Q9NT22 766 aa8.99□□□□□ -0.97
ECHDC1-206ENST00000417628 CDK11AQ9UQ88 783 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-206ENST00000417628 SYCP2Q9BX26 1530 aa8.99□□□□□ -0.97
ECHDC1-206ENST00000417628 NCOA2Q15596 1464 aa8.98□□□□□ -0.97
ECHDC1-206ENST00000417628 ARHGAP23Q9P227 1491 aa8.98□□□□□ -0.97
ECHDC1-206ENST00000417628 MLLT3P42568 568 aaPredicted RBP8.98□□□□□ -0.97
ECHDC1-206ENST00000417628 TMEM132AQ24JP5 1023 aa8.98□□□□□ -0.97
ECHDC1-206ENST00000417628 TRPC5Q9UL62 973 aaPredicted RBP8.98□□□□□ -0.97
ECHDC1-206ENST00000417628 SLIT1O75093 1534 aa8.98□□□□□ -0.97
ECHDC1-206ENST00000417628 ADGBQ8N7X0 1667 aa8.97□□□□□ -0.97
ECHDC1-206ENST00000417628 SUPT5HO00267 1087 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-206ENST00000417628 ZMYND10O75800 440 aa8.97□□□□□ -0.97
ECHDC1-206ENST00000417628 GABBR2O75899 941 aa8.97□□□□□ -0.97
ECHDC1-206ENST00000417628 BRPF1P55201 1214 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-206ENST00000417628 ASTLQ6HA08 431 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-206ENST00000417628 TMEM121BQ9BXQ6 578 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-206ENST00000417628 SLC24A3Q9HC58 644 aa8.97□□□□□ -0.97
ECHDC1-206ENST00000417628 UNC13BO14795 1591 aa8.97□□□□□ -0.97
ECHDC1-206ENST00000417628 DPYSL4O14531 572 aa8.96□□□□□ -0.98
ECHDC1-206ENST00000417628 LTKP29376 864 aa8.96□□□□□ -0.98
ECHDC1-206ENST00000417628 TXNDC2Q86VQ3 553 aa8.96□□□□□ -0.98
ECHDC1-206ENST00000417628 OCEL1Q9H607 264 aa8.96□□□□□ -0.98
ECHDC1-206ENST00000417628 PCDH10Q9P2E7 1040 aa8.96□□□□□ -0.98
ECHDC1-206ENST00000417628 UBR1Q8IWV7 1749 aa8.96□□□□□ -0.98
ECHDC1-206ENST00000417628 ATRNO75882 1429 aa8.96□□□□□ -0.98
ECHDC1-206ENST00000417628 SETD5Q9C0A6 1442 aa8.96□□□□□ -0.98
ECHDC1-206ENST00000417628 FOXK1P85037 733 aa8.95□□□□□ -0.98
ECHDC1-206ENST00000417628 USP21Q9UK80 565 aa8.95□□□□□ -0.98
ECHDC1-206ENST00000417628 GTF3C3Q9Y5Q9 886 aa8.95□□□□□ -0.98
ECHDC1-206ENST00000417628 RBM26Q5T8P6 1007 aaKnown RBP8.94□□□□□ -0.98
ECHDC1-206ENST00000417628 IER5LQ5T953 404 aa8.94□□□□□ -0.98
ECHDC1-206ENST00000417628 TMC2Q8TDI7 906 aa8.94□□□□□ -0.98
ECHDC1-206ENST00000417628 BOLA1Q9Y3E2 137 aa8.94□□□□□ -0.98
ECHDC1-206ENST00000417628 EID1Q9Y6B2 187 aa8.94□□□□□ -0.98
ECHDC1-206ENST00000417628 RTEL1-TNFRSF6BF6WH68 1400 aa8.94□□□□□ -0.98
ECHDC1-206ENST00000417628 EP400Q96L91 3159 aa8.94□□□□□ -0.98
ECHDC1-206ENST00000417628 KIF3CO14782 793 aa8.93□□□□□ -0.98
ECHDC1-206ENST00000417628 SP7Q8TDD2 431 aaPredicted RBP8.93□□□□□ -0.98
ECHDC1-206ENST00000417628 WASHC2CQ9Y4E1 1318 aa8.93□□□□□ -0.98
ECHDC1-206ENST00000417628 MAST1Q9Y2H9 1570 aa8.92□□□□□ -0.98
ECHDC1-206ENST00000417628 PNPLA6Q8IY17 1366 aa8.92□□□□□ -0.98
ECHDC1-206ENST00000417628 RANGAP1P46060 587 aaPredicted RBP8.92□□□□□ -0.98
ECHDC1-206ENST00000417628 PDIA6Q15084 440 aa8.92□□□□□ -0.98
ECHDC1-206ENST00000417628 BARGINQ6ZT62 677 aa8.92□□□□□ -0.98
ECHDC1-206ENST00000417628 GPATCH8Q9UKJ3 1502 aaKnown RBP8.91□□□□□ -0.98
ECHDC1-206ENST00000417628 ERVK-7P63135 1459 aa8.91□□□□□ -0.98
ECHDC1-206ENST00000417628 NINLQ9Y2I6 1382 aa8.91□□□□□ -0.98
ECHDC1-206ENST00000417628 C2orf72A6NCS6 295 aa8.91□□□□□ -0.98
ECHDC1-206ENST00000417628 ADAMTS2O95450 1211 aa8.91□□□□□ -0.98
ECHDC1-206ENST00000417628 R3HDM1Q15032 1099 aaKnown RBP8.91□□□□□ -0.98
ECHDC1-206ENST00000417628 PLPP6Q8IY26 295 aa8.91□□□□□ -0.98
ECHDC1-206ENST00000417628 MROH1Q8NDA8 1641 aa8.91□□□□□ -0.98
ECHDC1-206ENST00000417628 SPDYE16A6NNV3 312 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms