RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
RBM39-208ENST00000416108 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.66□□□□□ -0.54
RBM39-208ENST00000416108 EVC2Q86UK5 1308 aa11.66□□□□□ -0.54
RBM39-208ENST00000416108 MINK1Q8N4C8 1332 aaPredicted RBP11.66□□□□□ -0.54
RBM39-208ENST00000416108 KCNA6P17658 529 aa11.66□□□□□ -0.54
RBM39-208ENST00000416108 ROBO2Q9HCK4 1378 aa11.66□□□□□ -0.54
RBM39-208ENST00000416108 KIF7Q2M1P5 1343 aa11.65□□□□□ -0.54
RBM39-208ENST00000416108 WAPLQ7Z5K2 1190 aa11.65□□□□□ -0.54
RBM39-208ENST00000416108 DISP3Q9P2K9 1392 aa11.65□□□□□ -0.55
RBM39-208ENST00000416108 PLEKHH1Q9ULM0 1364 aa11.65□□□□□ -0.55
RBM39-208ENST00000416108 TULP4Q9NRJ4 1543 aa11.65□□□□□ -0.55
RBM39-208ENST00000416108 MYOM1P52179 1685 aa11.65□□□□□ -0.55
RBM39-208ENST00000416108 WASHC2AQ641Q2 1341 aa11.63□□□□□ -0.55
RBM39-208ENST00000416108 SRPK2P78362 688 aaKnown RBP11.63□□□□□ -0.55
RBM39-208ENST00000416108 C14orf37Q86TY3 774 aa11.63□□□□□ -0.55
RBM39-208ENST00000416108 RGPD8O14715 1765 aaPredicted RBP11.63□□□□□ -0.55
RBM39-208ENST00000416108 FMN2Q9NZ56 1722 aa11.63□□□□□ -0.55
RBM39-208ENST00000416108 PROSER2Q86WR7 435 aaPredicted RBP11.62□□□□□ -0.55
RBM39-208ENST00000416108 XIRP1Q702N8 1843 aaKnown RBP11.62□□□□□ -0.55
RBM39-208ENST00000416108 CDC42BPGQ6DT37 1551 aa11.62□□□□□ -0.55
RBM39-208ENST00000416108 C11orf95C9JLR9 678 aaPredicted RBP11.61□□□□□ -0.55
RBM39-208ENST00000416108 DDX10Q13206 875 aaKnown RBP11.61□□□□□ -0.55
RBM39-208ENST00000416108 ATAD2Q6PL18 1390 aa11.61□□□□□ -0.55
RBM39-208ENST00000416108 PUS7Q96PZ0 661 aaKnown RBP11.6□□□□□ -0.55
RBM39-208ENST00000416108 ADGRL3Q9HAR2 1447 aa11.6□□□□□ -0.55
RBM39-208ENST00000416108 TOPAZ1Q8N9V7 1692 aa11.59□□□□□ -0.55
RBM39-208ENST00000416108 WASLO00401 505 aaPredicted RBP11.59□□□□□ -0.55
RBM39-208ENST00000416108 CDK19Q9BWU1 502 aa11.59□□□□□ -0.55
RBM39-208ENST00000416108 CABP2Q9NPB3 220 aa11.59□□□□□ -0.55
RBM39-208ENST00000416108 NINLQ9Y2I6 1382 aa11.58□□□□□ -0.56
RBM39-208ENST00000416108 DIEXFQ68CQ4 756 aaKnown RBP11.58□□□□□ -0.56
RBM39-208ENST00000416108 TMC1Q8TDI8 760 aa11.58□□□□□ -0.56
RBM39-208ENST00000416108 AKAP12Q02952 1782 aa11.58□□□□□ -0.56
RBM39-208ENST00000416108 NCOA3Q9Y6Q9 1424 aa11.58□□□□□ -0.56
RBM39-208ENST00000416108 ZNF335Q9H4Z2 1342 aaPredicted RBP11.58□□□□□ -0.56
RBM39-208ENST00000416108 TMEM94Q12767 1356 aa11.56□□□□□ -0.56
RBM39-208ENST00000416108 USP32Q8NFA0 1604 aa11.56□□□□□ -0.56
RBM39-208ENST00000416108 KIF20BQ96Q89 1820 aa11.56□□□□□ -0.56
RBM39-208ENST00000416108 MSH6P52701 1360 aa11.55□□□□□ -0.56
RBM39-208ENST00000416108 MON2Q7Z3U7 1717 aa11.55□□□□□ -0.56
RBM39-208ENST00000416108 ANKARQ7Z5J8 1434 aa11.55□□□□□ -0.56
RBM39-208ENST00000416108 RBM33Q96EV2 1170 aaKnown RBP11.55□□□□□ -0.56
RBM39-208ENST00000416108 ATP7BP35670 1465 aa11.55□□□□□ -0.56
RBM39-208ENST00000416108 LRRC7Q96NW7 1537 aa11.55□□□□□ -0.56
RBM39-208ENST00000416108 DCCP43146 1447 aa11.54□□□□□ -0.56
RBM39-208ENST00000416108 PPIP5K1Q6PFW1 1433 aa11.54□□□□□ -0.56
RBM39-208ENST00000416108 KIF1AQ12756 1690 aa11.54□□□□□ -0.56
RBM39-208ENST00000416108 NUTM2FA1L443 756 aa11.53□□□□□ -0.56
RBM39-208ENST00000416108 ATF3P18847 181 aa11.53□□□□□ -0.56
RBM39-208ENST00000416108 HDGFL2Q7Z4V5 671 aaPredicted RBP11.53□□□□□ -0.56
RBM39-208ENST00000416108 NUDT16Q96DE0 195 aaKnown RBP11.53□□□□□ -0.56
RBM39-208ENST00000416108 C19orf44Q9H6X5 657 aa11.53□□□□□ -0.56
RBM39-208ENST00000416108 TERF2IPQ9NYB0 399 aa11.53□□□□□ -0.56
RBM39-208ENST00000416108 PANK3Q9H999 370 aa11.52□□□□□ -0.57
RBM39-208ENST00000416108 CCDC61Q9Y6R9 512 aa11.52□□□□□ -0.57
RBM39-208ENST00000416108 ANKRD36BQ8N2N9 1353 aa11.52□□□□□ -0.57
RBM39-208ENST00000416108 ANKRD26Q9UPS8 1709 aa11.52□□□□□ -0.57
RBM39-208ENST00000416108 LTBP4Q8N2S1 1624 aa11.51□□□□□ -0.57
RBM39-208ENST00000416108 ANP32CO43423 234 aa11.51□□□□□ -0.57
RBM39-208ENST00000416108 SLC12A5Q9H2X9 1139 aa11.51□□□□□ -0.57
RBM39-208ENST00000416108 CADPS2Q86UW7 1296 aa11.5□□□□□ -0.57
RBM39-208ENST00000416108 KNSTRNQ9Y448 316 aa11.5□□□□□ -0.57
RBM39-208ENST00000416108 PRR36Q9H6K5 1346 aa11.5□□□□□ -0.57
RBM39-208ENST00000416108 CABP1Q9NZU7 370 aa11.49□□□□□ -0.57
RBM39-208ENST00000416108 NSD3Q9BZ95 1437 aa11.49□□□□□ -0.57
RBM39-208ENST00000416108 A0A1W2PP64 1363 aa11.48□□□□□ -0.57
RBM39-208ENST00000416108 KTN1Q86UP2 1357 aaKnown RBP11.48□□□□□ -0.57
RBM39-208ENST00000416108 NRKQ7Z2Y5 1582 aa11.47□□□□□ -0.57
RBM39-208ENST00000416108 C1orf167Q5SNV9 1468 aa11.47□□□□□ -0.57
RBM39-208ENST00000416108 MST1RQ04912 1400 aa11.47□□□□□ -0.57
RBM39-208ENST00000416108 NGDNQ8NEJ9 315 aaKnown RBP11.47□□□□□ -0.57
RBM39-208ENST00000416108 CD163L1Q9NR16 1453 aa11.46□□□□□ -0.57
RBM39-208ENST00000416108 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.57
RBM39-208ENST00000416108 CNGB1Q14028 1251 aaPredicted RBP11.46□□□□□ -0.57
RBM39-208ENST00000416108 ESCO1Q5FWF5 840 aa11.46□□□□□ -0.57
RBM39-208ENST00000416108 ZNF692Q9BU19 519 aaPredicted RBP11.46□□□□□ -0.57
RBM39-208ENST00000416108 PHF8Q9UPP1 1060 aa11.46□□□□□ -0.57
RBM39-208ENST00000416108 EDC4Q6P2E9 1401 aaKnown RBP11.45□□□□□ -0.58
RBM39-208ENST00000416108 ACEP12821 1306 aa11.45□□□□□ -0.58
RBM39-208ENST00000416108 CGNL1Q0VF96 1302 aa11.45□□□□□ -0.58
RBM39-208ENST00000416108 PMFBP1Q8TBY8 1022 aa11.45□□□□□ -0.58
RBM39-208ENST00000416108 CPSF1Q10570 1443 aaKnown RBP11.44□□□□□ -0.58
RBM39-208ENST00000416108 USP6P35125 1406 aa11.43□□□□□ -0.58
RBM39-208ENST00000416108 POLR3AO14802 1390 aaPredicted RBP11.43□□□□□ -0.58
RBM39-208ENST00000416108 NSD2O96028 1365 aa11.43□□□□□ -0.58
RBM39-208ENST00000416108 PER1O15534 1290 aaPredicted RBP11.43□□□□□ -0.58
RBM39-208ENST00000416108 CC2D1BQ5T0F9 858 aaKnown RBP11.43□□□□□ -0.58
RBM39-208ENST00000416108 IQSEC2Q5JU85 1478 aa11.43□□□□□ -0.58
RBM39-208ENST00000416108 BRD4O60885 1362 aaPredicted RBP11.42□□□□□ -0.58
RBM39-208ENST00000416108 NPC1L1Q9UHC9 1359 aa11.42□□□□□ -0.58
RBM39-208ENST00000416108 RALBP1Q15311 655 aa11.42□□□□□ -0.58
RBM39-208ENST00000416108 CARD14Q9BXL6 1004 aa11.42□□□□□ -0.58
RBM39-208ENST00000416108 ROBO1Q9Y6N7 1651 aa11.42□□□□□ -0.58
RBM39-208ENST00000416108 NHSL1Q5SYE7 1610 aa11.42□□□□□ -0.58
RBM39-208ENST00000416108 MAP2P11137 1827 aaKnown RBP11.42□□□□□ -0.58
RBM39-208ENST00000416108 TRPM3Q9HCF6 1732 aaPredicted RBP11.41□□□□□ -0.58
RBM39-208ENST00000416108 PSME1Q06323 249 aa11.41□□□□□ -0.58
RBM39-208ENST00000416108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.41□□□□□ -0.58
RBM39-208ENST00000416108 ORAI2Q96SN7 254 aa11.41□□□□□ -0.58
RBM39-208ENST00000416108 TTC21AQ8NDW8 1320 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms