RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, human

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT3-208	ENST00000415548	ADGRB1	O14514	1584 aa		12.18	□□□□□ -0.46
CCT3-208	ENST00000415548	STAC3	Q96MF2	364 aa		12.18	□□□□□ -0.46
CCT3-208	ENST00000415548	SIN3A	Q96ST3	1273 aa		12.18	□□□□□ -0.46
CCT3-208	ENST00000415548	C1orf167	Q5SNV9	1468 aa		12.18	□□□□□ -0.46
CCT3-208	ENST00000415548	SIRT1	Q96EB6	747 aa		12.17	□□□□□ -0.46
CCT3-208	ENST00000415548	CDC42BPG	Q6DT37	1551 aa		12.17	□□□□□ -0.46
CCT3-208	ENST00000415548	PRAM1	Q96QH2	718 aa		12.16	□□□□□ -0.46
CCT3-208	ENST00000415548	JCAD	Q9P266	1359 aa		12.16	□□□□□ -0.46
CCT3-208	ENST00000415548	NHSL1	Q5SYE7	1610 aa		12.15	□□□□□ -0.46
CCT3-208	ENST00000415548	NEUROD1	Q13562	356 aa		12.15	□□□□□ -0.46
CCT3-208	ENST00000415548	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.15	□□□□□ -0.46
CCT3-208	ENST00000415548	DDX17	Q92841	729 aa	Known RBP	12.15	□□□□□ -0.46
CCT3-208	ENST00000415548	ORAI2	Q96SN7	254 aa		12.15	□□□□□ -0.46
CCT3-208	ENST00000415548	TRAK1	Q9UPV9	953 aa		12.15	□□□□□ -0.46
CCT3-208	ENST00000415548	DLC1	Q96QB1	1528 aa		12.15	□□□□□ -0.46
CCT3-208	ENST00000415548	ILDR2	Q71H61	639 aa		12.14	□□□□□ -0.47
CCT3-208	ENST00000415548	NUTM2F	A1L443	756 aa		12.13	□□□□□ -0.47
CCT3-208	ENST00000415548	L3MBTL2	Q969R5	705 aa		12.13	□□□□□ -0.47
CCT3-208	ENST00000415548	POGK	Q9P215	609 aa		12.13	□□□□□ -0.47
CCT3-208	ENST00000415548	FMN2	Q9NZ56	1722 aa		12.12	□□□□□ -0.47
CCT3-208	ENST00000415548	KIAA1210	Q9ULL0	1709 aa		12.11	□□□□□ -0.47
CCT3-208	ENST00000415548	ESCO1	Q5FWF5	840 aa		12.11	□□□□□ -0.47
CCT3-208	ENST00000415548	SHPRH	Q149N8	1683 aa		12.1	□□□□□ -0.47
CCT3-208	ENST00000415548	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.1	□□□□□ -0.47
CCT3-208	ENST00000415548	NBPF1	Q3BBV0	1214 aa		12.1	□□□□□ -0.47
CCT3-208	ENST00000415548	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.09	□□□□□ -0.47
CCT3-208	ENST00000415548	LRRC59	Q96AG4	307 aa	Known RBP	12.09	□□□□□ -0.47
CCT3-208	ENST00000415548	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.09	□□□□□ -0.47
CCT3-208	ENST00000415548	SPATA31A6	Q5VVP1	1343 aa		12.09	□□□□□ -0.47
CCT3-208	ENST00000415548	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.09	□□□□□ -0.47
CCT3-208	ENST00000415548	LRP6	O75581	1613 aa		12.08	□□□□□ -0.48
CCT3-208	ENST00000415548	ADGRB2	O60241	1585 aa		12.08	□□□□□ -0.48
CCT3-208	ENST00000415548	SOS2	Q07890	1332 aa	Predicted RBP	12.08	□□□□□ -0.48
CCT3-208	ENST00000415548	RGPD8	O14715	1765 aa	Predicted RBP	12.07	□□□□□ -0.48
CCT3-208	ENST00000415548	FOXO3	O43524	673 aa		12.07	□□□□□ -0.48
CCT3-208	ENST00000415548	XPC	Q01831	940 aa	Predicted RBP	12.07	□□□□□ -0.48
CCT3-208	ENST00000415548	RGS17	Q9UGC6	210 aa	Predicted RBP	12.07	□□□□□ -0.48
CCT3-208	ENST00000415548	NPHP3	Q7Z494	1330 aa		12.07	□□□□□ -0.48
CCT3-208	ENST00000415548	PNPLA6	Q8IY17	1366 aa		12.06	□□□□□ -0.48
CCT3-208	ENST00000415548	NUTM2B	A6NNL0	878 aa	Predicted RBP	12.06	□□□□□ -0.48
CCT3-208	ENST00000415548	NUTM2E	B1AL46	878 aa	Predicted RBP	12.06	□□□□□ -0.48
CCT3-208	ENST00000415548	NUTM2A	Q8IVF1	878 aa	Predicted RBP	12.06	□□□□□ -0.48
CCT3-208	ENST00000415548	USP32	Q8NFA0	1604 aa		12.05	□□□□□ -0.48
CCT3-208	ENST00000415548	MEX3C	Q5U5Q3	659 aa	Known RBP	12.05	□□□□□ -0.48
CCT3-208	ENST00000415548	PHF8	Q9UPP1	1060 aa		12.05	□□□□□ -0.48
CCT3-208	ENST00000415548	PXDN	Q92626	1479 aa		12.05	□□□□□ -0.48
CCT3-208	ENST00000415548	KIF1A	Q12756	1690 aa		12.05	□□□□□ -0.48
CCT3-208	ENST00000415548	TRPM1	Q7Z4N2	1603 aa		12.04	□□□□□ -0.48
CCT3-208	ENST00000415548	ANKAR	Q7Z5J8	1434 aa		12.04	□□□□□ -0.48
CCT3-208	ENST00000415548	WASL	O00401	505 aa	Predicted RBP	12.04	□□□□□ -0.48
CCT3-208	ENST00000415548	NBPF8	Q3BBV2	869 aa		12.04	□□□□□ -0.48
CCT3-208	ENST00000415548	PCGF6	Q9BYE7	350 aa		12.04	□□□□□ -0.48
CCT3-208	ENST00000415548	PRR36	Q9H6K5	1346 aa		12.04	□□□□□ -0.48
CCT3-208	ENST00000415548	EIF3A	Q14152	1382 aa	Known RBP	12.03	□□□□□ -0.48
CCT3-208	ENST00000415548	TONSL	Q96HA7	1378 aa		12.03	□□□□□ -0.48
CCT3-208	ENST00000415548	TULP4	Q9NRJ4	1543 aa		12.02	□□□□□ -0.48
CCT3-208	ENST00000415548	POTEA	Q6S8J7	498 aa		12.02	□□□□□ -0.49
CCT3-208	ENST00000415548	KRT28	Q7Z3Y7	464 aa		12.02	□□□□□ -0.49
CCT3-208	ENST00000415548	PMFBP1	Q8TBY8	1022 aa		12.02	□□□□□ -0.49
CCT3-208	ENST00000415548	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.01	□□□□□ -0.49
CCT3-208	ENST00000415548	ROCK2	O75116	1388 aa	Known RBP	12.01	□□□□□ -0.49
CCT3-208	ENST00000415548	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12	□□□□□ -0.49
CCT3-208	ENST00000415548	ADAMTS2	O95450	1211 aa		12	□□□□□ -0.49
CCT3-208	ENST00000415548	CDK19	Q9BWU1	502 aa		12	□□□□□ -0.49
CCT3-208	ENST00000415548	SPATA31A3	Q5VYP0	1347 aa		12	□□□□□ -0.49
CCT3-208	ENST00000415548	SOCS7	O14512	581 aa		11.99	□□□□□ -0.49
CCT3-208	ENST00000415548	PSME1	Q06323	249 aa		11.99	□□□□□ -0.49
CCT3-208	ENST00000415548	NUDT16	Q96DE0	195 aa	Known RBP	11.99	□□□□□ -0.49
CCT3-208	ENST00000415548	ATP7B	P35670	1465 aa		11.99	□□□□□ -0.49
CCT3-208	ENST00000415548	QRICH2	Q9H0J4	1663 aa		11.99	□□□□□ -0.49
CCT3-208	ENST00000415548	GPRASP1	Q5JY77	1395 aa		11.98	□□□□□ -0.49
CCT3-208	ENST00000415548	AFF2	P51816	1311 aa		11.98	□□□□□ -0.49
CCT3-208	ENST00000415548	C8orf37	Q96NL8	207 aa		11.98	□□□□□ -0.49
CCT3-208	ENST00000415548	ITSN1	Q15811	1721 aa		11.97	□□□□□ -0.49
CCT3-208	ENST00000415548	TNS3	Q68CZ2	1445 aa		11.97	□□□□□ -0.49
CCT3-208	ENST00000415548	SBNO1	A3KN83	1393 aa		11.97	□□□□□ -0.49
CCT3-208	ENST00000415548	ZNF772	Q68DY9	489 aa	Predicted RBP	11.97	□□□□□ -0.49
CCT3-208	ENST00000415548	RALGAPB	Q86X10	1494 aa		11.96	□□□□□ -0.49
CCT3-208	ENST00000415548	SRPK2	P78362	688 aa	Known RBP	11.96	□□□□□ -0.49
CCT3-208	ENST00000415548	LMOD2	Q6P5Q4	547 aa		11.96	□□□□□ -0.49
CCT3-208	ENST00000415548	NGDN	Q8NEJ9	315 aa	Known RBP	11.96	□□□□□ -0.49
CCT3-208	ENST00000415548	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.95	□□□□□ -0.5
CCT3-208	ENST00000415548	TOPAZ1	Q8N9V7	1692 aa		11.95	□□□□□ -0.5
CCT3-208	ENST00000415548	PLEKHG5	O94827	1062 aa		11.95	□□□□□ -0.5
CCT3-208	ENST00000415548	NGLY1	Q96IV0	654 aa		11.95	□□□□□ -0.5
CCT3-208	ENST00000415548	CARD11	Q9BXL7	1154 aa		11.95	□□□□□ -0.5
CCT3-208	ENST00000415548	CABP2	Q9NPB3	220 aa		11.95	□□□□□ -0.5
CCT3-208	ENST00000415548	CCDC61	Q9Y6R9	512 aa		11.95	□□□□□ -0.5
CCT3-208	ENST00000415548	ARHGEF10	O15013	1369 aa		11.93	□□□□□ -0.5
CCT3-208	ENST00000415548	CABLES1	Q8TDN4	633 aa		11.93	□□□□□ -0.5
CCT3-208	ENST00000415548	ACE	P12821	1306 aa		11.92	□□□□□ -0.5
CCT3-208	ENST00000415548	MARF1	Q9Y4F3	1742 aa	Known RBP	11.92	□□□□□ -0.5
CCT3-208	ENST00000415548	ALS2	Q96Q42	1657 aa		11.92	□□□□□ -0.5
CCT3-208	ENST00000415548	PLEKHG3	A1L390	1219 aa		11.92	□□□□□ -0.5
CCT3-208	ENST00000415548	PAK3	O75914	559 aa	Predicted RBP	11.92	□□□□□ -0.5
CCT3-208	ENST00000415548	PPIP5K1	Q6PFW1	1433 aa		11.92	□□□□□ -0.5
CCT3-208	ENST00000415548	POLR3A	O14802	1390 aa	Predicted RBP	11.92	□□□□□ -0.5
CCT3-208	ENST00000415548	EVC2	Q86UK5	1308 aa		11.91	□□□□□ -0.5
CCT3-208	ENST00000415548	HAP1	P54257	671 aa	Predicted RBP	11.91	□□□□□ -0.5
CCT3-208	ENST00000415548	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms