RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 C1orf167Q5SNV9 1468 aa16.04■□□□□ 0.16
A1CF-208ENST00000414883 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
A1CF-208ENST00000414883 WAPLQ7Z5K2 1190 aa16.03■□□□□ 0.16
A1CF-208ENST00000414883 STK26Q9P289 416 aa16.03■□□□□ 0.16
A1CF-208ENST00000414883 SHPRHQ149N8 1683 aa16.02■□□□□ 0.15
A1CF-208ENST00000414883 DCAF11Q8TEB1 546 aa16.01■□□□□ 0.15
A1CF-208ENST00000414883 SIRT1Q96EB6 747 aa16.01■□□□□ 0.15
A1CF-208ENST00000414883 DLC1Q96QB1 1528 aa16■□□□□ 0.15
A1CF-208ENST00000414883 JCADQ9P266 1359 aa16■□□□□ 0.15
A1CF-208ENST00000414883 FMN2Q9NZ56 1722 aa15.99■□□□□ 0.15
A1CF-208ENST00000414883 STAC3Q96MF2 364 aa15.99■□□□□ 0.15
A1CF-208ENST00000414883 KDM2AQ9Y2K7 1162 aa15.99■□□□□ 0.15
A1CF-208ENST00000414883 DDX17Q92841 729 aaKnown RBP15.98■□□□□ 0.15
A1CF-208ENST00000414883 ORAI2Q96SN7 254 aa15.98■□□□□ 0.15
A1CF-208ENST00000414883 RGS17Q9UGC6 210 aaPredicted RBP15.98■□□□□ 0.15
A1CF-208ENST00000414883 LRP6O75581 1613 aa15.97■□□□□ 0.15
A1CF-208ENST00000414883 KIAA1210Q9ULL0 1709 aa15.97■□□□□ 0.15
A1CF-208ENST00000414883 RGPD8O14715 1765 aaPredicted RBP15.96■□□□□ 0.15
A1CF-208ENST00000414883 ARHGEF28Q8N1W1 1705 aaKnown RBP15.94■□□□□ 0.14
A1CF-208ENST00000414883 ADGRB2O60241 1585 aa15.94■□□□□ 0.14
A1CF-208ENST00000414883 PRAM1Q96QH2 718 aa15.93■□□□□ 0.14
A1CF-208ENST00000414883 SOS2Q07890 1332 aaPredicted RBP15.93■□□□□ 0.14
A1CF-208ENST00000414883 SIN3AQ96ST3 1273 aa15.92■□□□□ 0.14
A1CF-208ENST00000414883 USP32Q8NFA0 1604 aa15.92■□□□□ 0.14
A1CF-208ENST00000414883 PXDNQ92626 1479 aa15.91■□□□□ 0.14
A1CF-208ENST00000414883 SOCS7O14512 581 aa15.91■□□□□ 0.14
A1CF-208ENST00000414883 TRIM26Q12899 539 aaPredicted RBP15.91■□□□□ 0.14
A1CF-208ENST00000414883 SPATA31A6Q5VVP1 1343 aa15.91■□□□□ 0.14
A1CF-208ENST00000414883 PNPLA6Q8IY17 1366 aa15.9■□□□□ 0.14
A1CF-208ENST00000414883 TRAK1Q9UPV9 953 aa15.9■□□□□ 0.14
A1CF-208ENST00000414883 SAFB2Q14151 953 aaKnown RBP eCLIP15.89■□□□□ 0.13
A1CF-208ENST00000414883 L3MBTL2Q969R5 705 aa15.89■□□□□ 0.13
A1CF-208ENST00000414883 COL22A1Q8NFW1 1626 aaPredicted RBP15.88■□□□□ 0.13
A1CF-208ENST00000414883 NUTM2FA1L443 756 aa15.88■□□□□ 0.13
A1CF-208ENST00000414883 NBPF1Q3BBV0 1214 aa15.88■□□□□ 0.13
A1CF-208ENST00000414883 ESCO1Q5FWF5 840 aa15.88■□□□□ 0.13
A1CF-208ENST00000414883 LRRC59Q96AG4 307 aaKnown RBP15.88■□□□□ 0.13
A1CF-208ENST00000414883 KIF1AQ12756 1690 aa15.88■□□□□ 0.13
A1CF-208ENST00000414883 POTEAQ6S8J7 498 aa15.86■□□□□ 0.13
A1CF-208ENST00000414883 TRPM1Q7Z4N2 1603 aa15.86■□□□□ 0.13
A1CF-208ENST00000414883 POGKQ9P215 609 aa15.85■□□□□ 0.13
A1CF-208ENST00000414883 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
A1CF-208ENST00000414883 FOXO3O43524 673 aa15.84■□□□□ 0.13
A1CF-208ENST00000414883 NPHP3Q7Z494 1330 aa15.84■□□□□ 0.13
A1CF-208ENST00000414883 PRR36Q9H6K5 1346 aa15.84■□□□□ 0.13
A1CF-208ENST00000414883 HIRIP3Q9BW71 556 aaPredicted RBP15.83■□□□□ 0.12
A1CF-208ENST00000414883 MINK1Q8N4C8 1332 aaPredicted RBP15.83■□□□□ 0.12
A1CF-208ENST00000414883 TULP4Q9NRJ4 1543 aa15.83■□□□□ 0.12
A1CF-208ENST00000414883 XPCQ01831 940 aaPredicted RBP15.82■□□□□ 0.12
A1CF-208ENST00000414883 NEUROD1Q13562 356 aa15.82■□□□□ 0.12
A1CF-208ENST00000414883 NUTM2BA6NNL0 878 aaPredicted RBP15.81■□□□□ 0.12
A1CF-208ENST00000414883 NUTM2EB1AL46 878 aaPredicted RBP15.81■□□□□ 0.12
A1CF-208ENST00000414883 MAPK8IP2Q13387 824 aaPredicted RBP15.81■□□□□ 0.12
A1CF-208ENST00000414883 NUTM2AQ8IVF1 878 aaPredicted RBP15.81■□□□□ 0.12
A1CF-208ENST00000414883 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
A1CF-208ENST00000414883 WASLO00401 505 aaPredicted RBP15.8■□□□□ 0.12
A1CF-208ENST00000414883 PHF8Q9UPP1 1060 aa15.8■□□□□ 0.12
A1CF-208ENST00000414883 ATP7BP35670 1465 aa15.79■□□□□ 0.12
A1CF-208ENST00000414883 MARF1Q9Y4F3 1742 aaKnown RBP15.79■□□□□ 0.12
A1CF-208ENST00000414883 TOPAZ1Q8N9V7 1692 aa15.79■□□□□ 0.12
A1CF-208ENST00000414883 SPATA31A3Q5VYP0 1347 aa15.78■□□□□ 0.12
A1CF-208ENST00000414883 NBPF8Q3BBV2 869 aa15.78■□□□□ 0.12
A1CF-208ENST00000414883 QRICH2Q9H0J4 1663 aa15.77■□□□□ 0.12
A1CF-208ENST00000414883 ITSN1Q15811 1721 aa15.77■□□□□ 0.11
A1CF-208ENST00000414883 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
A1CF-208ENST00000414883 MEX3CQ5U5Q3 659 aaKnown RBP15.76■□□□□ 0.11
A1CF-208ENST00000414883 KRT28Q7Z3Y7 464 aa15.76■□□□□ 0.11
A1CF-208ENST00000414883 ABCA3Q99758 1704 aa15.76■□□□□ 0.11
A1CF-208ENST00000414883 ALS2Q96Q42 1657 aa15.76■□□□□ 0.11
A1CF-208ENST00000414883 AFF2P51816 1311 aa15.75■□□□□ 0.11
A1CF-208ENST00000414883 PMFBP1Q8TBY8 1022 aa15.75■□□□□ 0.11
A1CF-208ENST00000414883 EP400Q96L91 3159 aa15.75■□□□□ 0.11
A1CF-208ENST00000414883 TNS3Q68CZ2 1445 aa15.75■□□□□ 0.11
A1CF-208ENST00000414883 SBNO1A3KN83 1393 aa15.75■□□□□ 0.11
A1CF-208ENST00000414883 EIF3AQ14152 1382 aaKnown RBP15.75■□□□□ 0.11
A1CF-208ENST00000414883 GPRASP1Q5JY77 1395 aa15.75■□□□□ 0.11
A1CF-208ENST00000414883 ADAMTS2O95450 1211 aa15.73■□□□□ 0.11
A1CF-208ENST00000414883 C8orf37Q96NL8 207 aa15.73■□□□□ 0.11
A1CF-208ENST00000414883 CDK19Q9BWU1 502 aa15.73■□□□□ 0.11
A1CF-208ENST00000414883 CENPJQ9HC77 1338 aaPredicted RBP15.72■□□□□ 0.11
A1CF-208ENST00000414883 CRYBG1Q9Y4K1 1723 aa15.72■□□□□ 0.11
A1CF-208ENST00000414883 ZNF772Q68DY9 489 aaPredicted RBP15.72■□□□□ 0.11
A1CF-208ENST00000414883 NUDT16Q96DE0 195 aaKnown RBP15.72■□□□□ 0.11
A1CF-208ENST00000414883 ROCK2O75116 1388 aaKnown RBP15.71■□□□□ 0.11
A1CF-208ENST00000414883 PSME1Q06323 249 aa15.7■□□□□ 0.1
A1CF-208ENST00000414883 FNBP4Q8N3X1 1017 aaPredicted RBP15.7■□□□□ 0.1
A1CF-208ENST00000414883 POLR3AO14802 1390 aaPredicted RBP15.7■□□□□ 0.1
A1CF-208ENST00000414883 RALGAPBQ86X10 1494 aa15.7■□□□□ 0.1
A1CF-208ENST00000414883 BCL9LQ86UU0 1499 aa15.69■□□□□ 0.1
A1CF-208ENST00000414883 TONSLQ96HA7 1378 aa15.68■□□□□ 0.1
A1CF-208ENST00000414883 PLEKHG3A1L390 1219 aa15.68■□□□□ 0.1
A1CF-208ENST00000414883 CDK12Q9NYV4 1490 aaPredicted RBP15.67■□□□□ 0.1
A1CF-208ENST00000414883 ARHGEF10O15013 1369 aa15.67■□□□□ 0.1
A1CF-208ENST00000414883 CABLES1Q8TDN4 633 aa15.67■□□□□ 0.1
A1CF-208ENST00000414883 NGLY1Q96IV0 654 aa15.67■□□□□ 0.1
A1CF-208ENST00000414883 CCDC61Q9Y6R9 512 aa15.67■□□□□ 0.1
A1CF-208ENST00000414883 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.67■□□□□ 0.1
A1CF-208ENST00000414883 ATRNO75882 1429 aa15.67■□□□□ 0.1
A1CF-208ENST00000414883 SLIT2O94813 1529 aa15.66■□□□□ 0.1
A1CF-208ENST00000414883 NGDNQ8NEJ9 315 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms