RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ASXL2Q76L83 1435 aa14.83□□□□□ -0.04
PTPRF-205ENST00000414879 ZNF428Q96B54 188 aa14.82□□□□□ -0.04
PTPRF-205ENST00000414879 TSPYL4Q9UJ04 414 aa14.82□□□□□ -0.04
PTPRF-205ENST00000414879 CCDC61Q9Y6R9 512 aa14.82□□□□□ -0.04
PTPRF-205ENST00000414879 L1TD1Q5T7N2 865 aaKnown RBP14.82□□□□□ -0.04
PTPRF-205ENST00000414879 RUFY2Q8WXA3 655 aa14.82□□□□□ -0.04
PTPRF-205ENST00000414879 ABCA8O94911 1581 aa14.82□□□□□ -0.04
PTPRF-205ENST00000414879 ST18O60284 1047 aa14.82□□□□□ -0.04
PTPRF-205ENST00000414879 AEBP2Q6ZN18 517 aaPredicted RBP14.81□□□□□ -0.04
PTPRF-205ENST00000414879 C9orf78Q9NZ63 289 aaPredicted RBP14.81□□□□□ -0.04
PTPRF-205ENST00000414879 ESCO1Q5FWF5 840 aa14.81□□□□□ -0.04
PTPRF-205ENST00000414879 RBM19Q9Y4C8 960 aaKnown RBP14.81□□□□□ -0.04
PTPRF-205ENST00000414879 WDR63Q8IWG1 891 aa14.8□□□□□ -0.04
PTPRF-205ENST00000414879 SYAP1Q96A49 352 aaPredicted RBP14.8□□□□□ -0.04
PTPRF-205ENST00000414879 KDM5BQ9UGL1 1544 aa14.8□□□□□ -0.04
PTPRF-205ENST00000414879 ABCC10Q5T3U5 1492 aa14.8□□□□□ -0.04
PTPRF-205ENST00000414879 GNL2Q13823 731 aaKnown RBP14.8□□□□□ -0.04
PTPRF-205ENST00000414879 FAM161AQ3B820 660 aa14.8□□□□□ -0.04
PTPRF-205ENST00000414879 ADCY10Q96PN6 1610 aa14.79□□□□□ -0.04
PTPRF-205ENST00000414879 NSD2O96028 1365 aa14.79□□□□□ -0.04
PTPRF-205ENST00000414879 NLRP2Q9NX02 1062 aa14.79□□□□□ -0.04
PTPRF-205ENST00000414879 TCP11L2Q8N4U5 519 aa14.79□□□□□ -0.04
PTPRF-205ENST00000414879 KCNH5Q8NCM2 988 aa14.79□□□□□ -0.04
PTPRF-205ENST00000414879 CABP1Q9NZU7 370 aa14.78□□□□□ -0.04
PTPRF-205ENST00000414879 LRRIQ1Q96JM4 1722 aa14.78□□□□□ -0.04
PTPRF-205ENST00000414879 ADAMTS8Q9UP79 889 aa14.78□□□□□ -0.04
PTPRF-205ENST00000414879 SCAF11Q99590 1463 aaKnown RBP14.78□□□□□ -0.04
PTPRF-205ENST00000414879 CCDC30Q5VVM6 783 aa14.78□□□□□ -0.04
PTPRF-205ENST00000414879 ABCC2Q92887 1545 aa14.78□□□□□ -0.04
PTPRF-205ENST00000414879 SLC12A5Q9H2X9 1139 aa14.78□□□□□ -0.04
PTPRF-205ENST00000414879 REC8O95072 547 aa14.77□□□□□ -0.04
PTPRF-205ENST00000414879 A2MP01023 1474 aa14.77□□□□□ -0.04
PTPRF-205ENST00000414879 G3V3G9 751 aa14.77□□□□□ -0.05
PTPRF-205ENST00000414879 ELL2O00472 640 aaPredicted RBP14.77□□□□□ -0.05
PTPRF-205ENST00000414879 FKBP5Q13451 457 aaPredicted RBP14.77□□□□□ -0.05
PTPRF-205ENST00000414879 DCAF8Q5TAQ9 597 aa14.77□□□□□ -0.05
PTPRF-205ENST00000414879 MAGI3Q5TCQ9 1506 aa14.76□□□□□ -0.05
PTPRF-205ENST00000414879 GNAI3P08754 354 aa14.76□□□□□ -0.05
PTPRF-205ENST00000414879 TATP17735 454 aaPredicted RBP14.76□□□□□ -0.05
PTPRF-205ENST00000414879 CRBNQ96SW2 442 aa14.76□□□□□ -0.05
PTPRF-205ENST00000414879 FCHSD2O94868 740 aa14.76□□□□□ -0.05
PTPRF-205ENST00000414879 PDE3AQ14432 1141 aa14.76□□□□□ -0.05
PTPRF-205ENST00000414879 ANKRD45Q5TZF3 282 aa14.76□□□□□ -0.05
PTPRF-205ENST00000414879 MEX3CQ5U5Q3 659 aaKnown RBP14.76□□□□□ -0.05
PTPRF-205ENST00000414879 COG6Q9Y2V7 657 aa14.76□□□□□ -0.05
PTPRF-205ENST00000414879 MFAP1P55081 439 aaKnown RBP14.75□□□□□ -0.05
PTPRF-205ENST00000414879 SHROOM2Q13796 1616 aa14.75□□□□□ -0.05
PTPRF-205ENST00000414879 EIF2S2P20042 333 aaKnown RBP14.74□□□□□ -0.05
PTPRF-205ENST00000414879 DNMT1P26358 1616 aaKnown RBP14.74□□□□□ -0.05
PTPRF-205ENST00000414879 HMOX1P09601 288 aa14.74□□□□□ -0.05
PTPRF-205ENST00000414879 IPO9Q96P70 1041 aaKnown RBP14.74□□□□□ -0.05
PTPRF-205ENST00000414879 C14orf93Q9H972 538 aaKnown RBP14.74□□□□□ -0.05
PTPRF-205ENST00000414879 PRKAR2BP31323 418 aa14.74□□□□□ -0.05
PTPRF-205ENST00000414879 G3BP1Q13283 466 aaKnown RBP eCLIP14.74□□□□□ -0.05
PTPRF-205ENST00000414879 NUDT16Q96DE0 195 aaKnown RBP14.74□□□□□ -0.05
PTPRF-205ENST00000414879 EXOC6Q8TAG9 804 aa14.73□□□□□ -0.05
PTPRF-205ENST00000414879 SPG7Q9UQ90 795 aa14.73□□□□□ -0.05
PTPRF-205ENST00000414879 GCC2Q8IWJ2 1684 aa14.73□□□□□ -0.05
PTPRF-205ENST00000414879 ERC2O15083 957 aa14.73□□□□□ -0.05
PTPRF-205ENST00000414879 PUS7Q96PZ0 661 aaKnown RBP14.73□□□□□ -0.05
PTPRF-205ENST00000414879 FRAT2O75474 233 aaPredicted RBP14.73□□□□□ -0.05
PTPRF-205ENST00000414879 DMRT2Q9Y5R5 561 aa14.73□□□□□ -0.05
PTPRF-205ENST00000414879 BCL2L13Q9BXK5 485 aa14.72□□□□□ -0.05
PTPRF-205ENST00000414879 IDI1Q13907 227 aa14.72□□□□□ -0.05
PTPRF-205ENST00000414879 ABCC11Q96J66 1382 aa14.72□□□□□ -0.05
PTPRF-205ENST00000414879 ATP6V1DQ9Y5K8 247 aa14.72□□□□□ -0.05
PTPRF-205ENST00000414879 IFIT2P09913 472 aaKnown RBP14.71□□□□□ -0.05
PTPRF-205ENST00000414879 DIAPH3Q9NSV4 1193 aa14.71□□□□□ -0.05
PTPRF-205ENST00000414879 TNRQ92752 1358 aa14.71□□□□□ -0.05
PTPRF-205ENST00000414879 GLIPR1L2Q4G1C9 344 aa14.71□□□□□ -0.05
PTPRF-205ENST00000414879 UHRF1BP1LA0JNW5 1464 aa14.71□□□□□ -0.05
PTPRF-205ENST00000414879 SLC26A8Q96RN1 970 aa14.71□□□□□ -0.05
PTPRF-205ENST00000414879 LRPPRCP42704 1394 aaKnown RBP14.71□□□□□ -0.06
PTPRF-205ENST00000414879 NSD3Q9BZ95 1437 aa14.7□□□□□ -0.06
PTPRF-205ENST00000414879 SYCP2Q9BX26 1530 aa14.7□□□□□ -0.06
PTPRF-205ENST00000414879 AMOTL1Q8IY63 956 aa14.7□□□□□ -0.06
PTPRF-205ENST00000414879 RNF20Q5VTR2 975 aa14.69□□□□□ -0.06
PTPRF-205ENST00000414879 NOL10Q9BSC4 688 aaKnown RBP14.69□□□□□ -0.06
PTPRF-205ENST00000414879 ZKSCAN1P17029 563 aaPredicted RBP14.69□□□□□ -0.06
PTPRF-205ENST00000414879 CPLX2Q6PUV4 134 aaKnown RBP14.69□□□□□ -0.06
PTPRF-205ENST00000414879 RIC3Q7Z5B4 369 aa14.69□□□□□ -0.06
PTPRF-205ENST00000414879 ADGBQ8N7X0 1667 aa14.69□□□□□ -0.06
PTPRF-205ENST00000414879 UBTFL1P0CB47 393 aaPredicted RBP14.68□□□□□ -0.06
PTPRF-205ENST00000414879 CLASP1Q7Z460 1538 aa14.68□□□□□ -0.06
PTPRF-205ENST00000414879 PDE4AP27815 886 aa14.68□□□□□ -0.06
PTPRF-205ENST00000414879 EIF2AK4Q9P2K8 1649 aaKnown RBP14.68□□□□□ -0.06
PTPRF-205ENST00000414879 ANO8Q9HCE9 1232 aaPredicted RBP14.67□□□□□ -0.06
PTPRF-205ENST00000414879 WASLO00401 505 aaPredicted RBP14.67□□□□□ -0.06
PTPRF-205ENST00000414879 NOS1P29475 1434 aa14.67□□□□□ -0.06
PTPRF-205ENST00000414879 PLIN1O60240 522 aa14.67□□□□□ -0.06
PTPRF-205ENST00000414879 CCT4P50991 539 aaKnown RBP14.67□□□□□ -0.06
PTPRF-205ENST00000414879 TPM4P67936 248 aa14.67□□□□□ -0.06
PTPRF-205ENST00000414879 TWISTNBQ3B726 338 aaPredicted RBP14.67□□□□□ -0.06
PTPRF-205ENST00000414879 INTS3Q68E01 1043 aaKnown RBP14.67□□□□□ -0.06
PTPRF-205ENST00000414879 ERC1Q8IUD2 1116 aa14.67□□□□□ -0.06
PTPRF-205ENST00000414879 PHF14O94880 888 aa14.66□□□□□ -0.06
PTPRF-205ENST00000414879 ISY1Q9ULR0 285 aaKnown RBP14.66□□□□□ -0.06
PTPRF-205ENST00000414879 SULT6B1Q6IMI4 303 aa14.66□□□□□ -0.06
PTPRF-205ENST00000414879 RALGAPBQ86X10 1494 aa14.66□□□□□ -0.06
PTPRF-205ENST00000414879 RILPL2Q969X0 211 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms