RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 BRINP3Q76B58 766 aa14.55□□□□□ -0.08
TMEM248-202ENST00000413593 DLC1Q96QB1 1528 aa14.55□□□□□ -0.08
TMEM248-202ENST00000413593 PRAM1Q96QH2 718 aa14.54□□□□□ -0.08
TMEM248-202ENST00000413593 C1orf167Q5SNV9 1468 aa14.54□□□□□ -0.08
TMEM248-202ENST00000413593 CDC42BPGQ6DT37 1551 aa14.53□□□□□ -0.08
TMEM248-202ENST00000413593 TRAK1Q9UPV9 953 aa14.53□□□□□ -0.08
TMEM248-202ENST00000413593 SAFB2Q14151 953 aaKnown RBP eCLIP14.51□□□□□ -0.09
TMEM248-202ENST00000413593 NBPF1Q3BBV0 1214 aa14.51□□□□□ -0.09
TMEM248-202ENST00000413593 POGKQ9P215 609 aa14.51□□□□□ -0.09
TMEM248-202ENST00000413593 AHDC1Q5TGY3 1603 aaPredicted RBP14.5□□□□□ -0.09
TMEM248-202ENST00000413593 ORAI2Q96SN7 254 aa14.49□□□□□ -0.09
TMEM248-202ENST00000413593 TONSLQ96HA7 1378 aa14.48□□□□□ -0.09
TMEM248-202ENST00000413593 KIAA1210Q9ULL0 1709 aa14.48□□□□□ -0.09
TMEM248-202ENST00000413593 COL16A1Q07092 1604 aaPredicted RBP14.48□□□□□ -0.09
TMEM248-202ENST00000413593 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
TMEM248-202ENST00000413593 JCADQ9P266 1359 aa14.47□□□□□ -0.09
TMEM248-202ENST00000413593 DISP3Q9P2K9 1392 aa14.47□□□□□ -0.09
TMEM248-202ENST00000413593 PHLPP1O60346 1717 aa14.46□□□□□ -0.09
TMEM248-202ENST00000413593 NUTM2FA1L443 756 aa14.46□□□□□ -0.09
TMEM248-202ENST00000413593 ESCO1Q5FWF5 840 aa14.46□□□□□ -0.09
TMEM248-202ENST00000413593 DDX17Q92841 729 aaKnown RBP14.46□□□□□ -0.09
TMEM248-202ENST00000413593 MINK1Q8N4C8 1332 aaPredicted RBP14.45□□□□□ -0.1
TMEM248-202ENST00000413593 MED1Q15648 1581 aaPredicted RBP14.45□□□□□ -0.1
TMEM248-202ENST00000413593 NBPF8Q3BBV2 869 aa14.45□□□□□ -0.1
TMEM248-202ENST00000413593 HIRIP3Q9BW71 556 aaPredicted RBP14.45□□□□□ -0.1
TMEM248-202ENST00000413593 ADGRB2O60241 1585 aa14.44□□□□□ -0.1
TMEM248-202ENST00000413593 NHSL1Q5SYE7 1610 aa14.44□□□□□ -0.1
TMEM248-202ENST00000413593 FMN2Q9NZ56 1722 aa14.44□□□□□ -0.1
TMEM248-202ENST00000413593 ARHGEF28Q8N1W1 1705 aaKnown RBP14.43□□□□□ -0.1
TMEM248-202ENST00000413593 SOS2Q07890 1332 aaPredicted RBP14.42□□□□□ -0.1
TMEM248-202ENST00000413593 CLSPNQ9HAW4 1339 aa14.42□□□□□ -0.1
TMEM248-202ENST00000413593 WASLO00401 505 aaPredicted RBP14.42□□□□□ -0.1
TMEM248-202ENST00000413593 LRRC59Q96AG4 307 aaKnown RBP14.42□□□□□ -0.1
TMEM248-202ENST00000413593 ROCK2O75116 1388 aaKnown RBP14.42□□□□□ -0.1
TMEM248-202ENST00000413593 NPHP3Q7Z494 1330 aa14.41□□□□□ -0.1
TMEM248-202ENST00000413593 ANKARQ7Z5J8 1434 aa14.41□□□□□ -0.1
TMEM248-202ENST00000413593 TRPM1Q7Z4N2 1603 aa14.41□□□□□ -0.1
TMEM248-202ENST00000413593 GPRASP1Q5JY77 1395 aa14.41□□□□□ -0.1
TMEM248-202ENST00000413593 CENPJQ9HC77 1338 aaPredicted RBP14.41□□□□□ -0.1
TMEM248-202ENST00000413593 EIF3AQ14152 1382 aaKnown RBP14.4□□□□□ -0.1
TMEM248-202ENST00000413593 FOXO3O43524 673 aa14.4□□□□□ -0.1
TMEM248-202ENST00000413593 SPATA31A6Q5VVP1 1343 aa14.4□□□□□ -0.1
TMEM248-202ENST00000413593 PRR36Q9H6K5 1346 aa14.4□□□□□ -0.1
TMEM248-202ENST00000413593 PHF8Q9UPP1 1060 aa14.39□□□□□ -0.11
TMEM248-202ENST00000413593 TULP4Q9NRJ4 1543 aa14.39□□□□□ -0.11
TMEM248-202ENST00000413593 PXDNQ92626 1479 aa14.38□□□□□ -0.11
TMEM248-202ENST00000413593 PNPLA6Q8IY17 1366 aa14.38□□□□□ -0.11
TMEM248-202ENST00000413593 RALGAPBQ86X10 1494 aa14.38□□□□□ -0.11
TMEM248-202ENST00000413593 XPCQ01831 940 aaPredicted RBP14.37□□□□□ -0.11
TMEM248-202ENST00000413593 USP32Q8NFA0 1604 aa14.37□□□□□ -0.11
TMEM248-202ENST00000413593 SHPRHQ149N8 1683 aa14.36□□□□□ -0.11
TMEM248-202ENST00000413593 CDK19Q9BWU1 502 aa14.36□□□□□ -0.11
TMEM248-202ENST00000413593 LRP6O75581 1613 aa14.36□□□□□ -0.11
TMEM248-202ENST00000413593 KIF1AQ12756 1690 aa14.36□□□□□ -0.11
TMEM248-202ENST00000413593 PMFBP1Q8TBY8 1022 aa14.35□□□□□ -0.11
TMEM248-202ENST00000413593 CCER1Q8TC90 406 aaPredicted RBP14.35□□□□□ -0.11
TMEM248-202ENST00000413593 NUDT16Q96DE0 195 aaKnown RBP14.35□□□□□ -0.11
TMEM248-202ENST00000413593 CARD11Q9BXL7 1154 aa14.35□□□□□ -0.11
TMEM248-202ENST00000413593 TIMELESSQ9UNS1 1208 aa14.35□□□□□ -0.11
TMEM248-202ENST00000413593 ATP7BP35670 1465 aa14.35□□□□□ -0.11
TMEM248-202ENST00000413593 KRT28Q7Z3Y7 464 aa14.34□□□□□ -0.11
TMEM248-202ENST00000413593 NUTM2BA6NNL0 878 aaPredicted RBP14.33□□□□□ -0.12
TMEM248-202ENST00000413593 NUTM2EB1AL46 878 aaPredicted RBP14.33□□□□□ -0.12
TMEM248-202ENST00000413593 NUTM2AQ8IVF1 878 aaPredicted RBP14.33□□□□□ -0.12
TMEM248-202ENST00000413593 ILDR2Q71H61 639 aa14.32□□□□□ -0.12
TMEM248-202ENST00000413593 RGS17Q9UGC6 210 aaPredicted RBP14.32□□□□□ -0.12
TMEM248-202ENST00000413593 SPATA31A3Q5VYP0 1347 aa14.32□□□□□ -0.12
TMEM248-202ENST00000413593 SRPK2P78362 688 aaKnown RBP14.31□□□□□ -0.12
TMEM248-202ENST00000413593 PSME1Q06323 249 aa14.31□□□□□ -0.12
TMEM248-202ENST00000413593 CCDC61Q9Y6R9 512 aa14.31□□□□□ -0.12
TMEM248-202ENST00000413593 QRICH2Q9H0J4 1663 aa14.3□□□□□ -0.12
TMEM248-202ENST00000413593 RGPD8O14715 1765 aaPredicted RBP14.3□□□□□ -0.12
TMEM248-202ENST00000413593 MEX3CQ5U5Q3 659 aaKnown RBP14.3□□□□□ -0.12
TMEM248-202ENST00000413593 POTEDQ86YR6 584 aa14.3□□□□□ -0.12
TMEM248-202ENST00000413593 NGDNQ8NEJ9 315 aaKnown RBP14.3□□□□□ -0.12
TMEM248-202ENST00000413593 CABP2Q9NPB3 220 aa14.3□□□□□ -0.12
TMEM248-202ENST00000413593 EVC2Q86UK5 1308 aa14.3□□□□□ -0.12
TMEM248-202ENST00000413593 SBNO1A3KN83 1393 aa14.3□□□□□ -0.12
TMEM248-202ENST00000413593 PLEKHG3A1L390 1219 aa14.29□□□□□ -0.12
TMEM248-202ENST00000413593 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
TMEM248-202ENST00000413593 SBNO2Q9Y2G9 1366 aa14.29□□□□□ -0.12
TMEM248-202ENST00000413593 TNS3Q68CZ2 1445 aa14.29□□□□□ -0.12
TMEM248-202ENST00000413593 COL22A1Q8NFW1 1626 aaPredicted RBP14.28□□□□□ -0.12
TMEM248-202ENST00000413593 POLR3AO14802 1390 aaPredicted RBP14.27□□□□□ -0.12
TMEM248-202ENST00000413593 PPIP5K1Q6PFW1 1433 aa14.26□□□□□ -0.13
TMEM248-202ENST00000413593 ARHGEF10O15013 1369 aa14.26□□□□□ -0.13
TMEM248-202ENST00000413593 ACEP12821 1306 aa14.26□□□□□ -0.13
TMEM248-202ENST00000413593 ADAMTS2O95450 1211 aa14.26□□□□□ -0.13
TMEM248-202ENST00000413593 TOPAZ1Q8N9V7 1692 aa14.26□□□□□ -0.13
TMEM248-202ENST00000413593 LMOD2Q6P5Q4 547 aa14.25□□□□□ -0.13
TMEM248-202ENST00000413593 POTEAQ6S8J7 498 aa14.25□□□□□ -0.13
TMEM248-202ENST00000413593 ITSN1Q15811 1721 aa14.24□□□□□ -0.13
TMEM248-202ENST00000413593 C8orf37Q96NL8 207 aa14.24□□□□□ -0.13
TMEM248-202ENST00000413593 CABP1Q9NZU7 370 aa14.24□□□□□ -0.13
TMEM248-202ENST00000413593 AFF2P51816 1311 aa14.23□□□□□ -0.13
TMEM248-202ENST00000413593 ST20-MTHFSA0A0A6YYL1 179 aa14.23□□□□□ -0.13
TMEM248-202ENST00000413593 ZNF772Q68DY9 489 aaPredicted RBP14.23□□□□□ -0.13
TMEM248-202ENST00000413593 TESK2Q96S53 571 aa14.23□□□□□ -0.13
TMEM248-202ENST00000413593 TRPM3Q9HCF6 1732 aaPredicted RBP14.23□□□□□ -0.13
TMEM248-202ENST00000413593 ATAD2Q6PL18 1390 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms