RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 TMEM2Q9UHN6 1383 aa7.57□□□□□ -1.2
PRDM2-206ENST00000413440 ROCK1Q13464 1354 aa7.57□□□□□ -1.2
PRDM2-206ENST00000413440 NPHP3Q7Z494 1330 aa7.57□□□□□ -1.2
PRDM2-206ENST00000413440 IRX6P78412 446 aaPredicted RBP7.57□□□□□ -1.2
PRDM2-206ENST00000413440 MRS2Q9HD23 443 aa7.57□□□□□ -1.2
PRDM2-206ENST00000413440 NUDT16Q96DE0 195 aaKnown RBP7.57□□□□□ -1.2
PRDM2-206ENST00000413440 DIP2CQ9Y2E4 1556 aa7.57□□□□□ -1.2
PRDM2-206ENST00000413440 ISY1Q9ULR0 285 aaKnown RBP7.57□□□□□ -1.2
PRDM2-206ENST00000413440 C1orf141Q5JVX7 400 aa7.56□□□□□ -1.2
PRDM2-206ENST00000413440 ZNF710Q8N1W2 664 aa7.56□□□□□ -1.2
PRDM2-206ENST00000413440 NLRP1Q9C000 1473 aa7.56□□□□□ -1.2
PRDM2-206ENST00000413440 RTF1Q92541 710 aaKnown RBP7.56□□□□□ -1.2
PRDM2-206ENST00000413440 CABP1Q9NZU7 370 aa7.56□□□□□ -1.2
PRDM2-206ENST00000413440 A2ML1A8K2U0 1454 aa7.56□□□□□ -1.2
PRDM2-206ENST00000413440 MAST1Q9Y2H9 1570 aa7.56□□□□□ -1.2
PRDM2-206ENST00000413440 EFCAB6Q5THR3 1501 aa7.56□□□□□ -1.2
PRDM2-206ENST00000413440 NUDCQ9Y266 331 aa7.56□□□□□ -1.2
PRDM2-206ENST00000413440 CFAP44Q96MT7 982 aa7.55□□□□□ -1.2
PRDM2-206ENST00000413440 BCL11BQ9C0K0 894 aaPredicted RBP7.55□□□□□ -1.2
PRDM2-206ENST00000413440 RAPGEF4Q8WZA2 1011 aa7.55□□□□□ -1.2
PRDM2-206ENST00000413440 MAPK8IP3Q9UPT6 1336 aa7.55□□□□□ -1.2
PRDM2-206ENST00000413440 BCORL1Q5H9F3 1711 aa7.55□□□□□ -1.2
PRDM2-206ENST00000413440 DNMT1P26358 1616 aaKnown RBP7.55□□□□□ -1.2
PRDM2-206ENST00000413440 CEP152O94986 1710 aa7.55□□□□□ -1.2
PRDM2-206ENST00000413440 ORAI2Q96SN7 254 aa7.55□□□□□ -1.2
PRDM2-206ENST00000413440 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.55□□□□□ -1.2
PRDM2-206ENST00000413440 ERVK-7P63135 1459 aa7.54□□□□□ -1.2
PRDM2-206ENST00000413440 HFM1A2PYH4 1435 aa7.54□□□□□ -1.2
PRDM2-206ENST00000413440 ANKRD30BQ9BXX2 1392 aa7.54□□□□□ -1.2
PRDM2-206ENST00000413440 MAP3K1Q13233 1512 aa7.54□□□□□ -1.2
PRDM2-206ENST00000413440 ARHGEF5Q12774 1597 aa7.54□□□□□ -1.2
PRDM2-206ENST00000413440 ANP32EQ9BTT0 268 aa7.54□□□□□ -1.2
PRDM2-206ENST00000413440 NPATQ14207 1427 aa7.53□□□□□ -1.2
PRDM2-206ENST00000413440 FAM98CQ17RN3 349 aaKnown RBP7.53□□□□□ -1.2
PRDM2-206ENST00000413440 BTG4Q9NY30 223 aa7.53□□□□□ -1.2
PRDM2-206ENST00000413440 PZPP20742 1482 aa7.53□□□□□ -1.2
PRDM2-206ENST00000413440 TBX22Q9Y458 520 aa7.53□□□□□ -1.2
PRDM2-206ENST00000413440 SHANK2Q9UPX8 1470 aa7.53□□□□□ -1.2
PRDM2-206ENST00000413440 PPP4R2Q9NY27 417 aa7.52□□□□□ -1.2
PRDM2-206ENST00000413440 CEP170BQ9Y4F5 1589 aaPredicted RBP7.52□□□□□ -1.21
PRDM2-206ENST00000413440 RBM42Q9BTD8 480 aaKnown RBP7.52□□□□□ -1.21
PRDM2-206ENST00000413440 NBPF1Q3BBV0 1214 aa7.52□□□□□ -1.21
PRDM2-206ENST00000413440 ZRANB1Q9UGI0 708 aa7.52□□□□□ -1.21
PRDM2-206ENST00000413440 HSPA5P11021 654 aaKnown RBP7.52□□□□□ -1.21
PRDM2-206ENST00000413440 ACSBG1Q96GR2 724 aa7.52□□□□□ -1.21
PRDM2-206ENST00000413440 SMG6Q86US8 1419 aaKnown RBP7.52□□□□□ -1.21
PRDM2-206ENST00000413440 ST20-MTHFSA0A0A6YYL1 179 aa7.51□□□□□ -1.21
PRDM2-206ENST00000413440 WASLO00401 505 aaPredicted RBP7.51□□□□□ -1.21
PRDM2-206ENST00000413440 NBPF8Q3BBV2 869 aa7.51□□□□□ -1.21
PRDM2-206ENST00000413440 NBPF14Q5TI25 921 aa7.51□□□□□ -1.21
PRDM2-206ENST00000413440 ABCC3O15438 1527 aa7.51□□□□□ -1.21
PRDM2-206ENST00000413440 KTN1Q86UP2 1357 aaKnown RBP7.51□□□□□ -1.21
PRDM2-206ENST00000413440 AFF2P51816 1311 aa7.51□□□□□ -1.21
PRDM2-206ENST00000413440 KDM5CP41229 1560 aa7.51□□□□□ -1.21
PRDM2-206ENST00000413440 RICTORQ6R327 1708 aa7.51□□□□□ -1.21
PRDM2-206ENST00000413440 GGNBP2Q9H3C7 697 aa7.51□□□□□ -1.21
PRDM2-206ENST00000413440 LRRIQ1Q96JM4 1722 aa7.5□□□□□ -1.21
PRDM2-206ENST00000413440 GTF2E1P29083 439 aaPredicted RBP7.5□□□□□ -1.21
PRDM2-206ENST00000413440 TRPC5Q9UL62 973 aaPredicted RBP7.5□□□□□ -1.21
PRDM2-206ENST00000413440 TATP17735 454 aaPredicted RBP7.5□□□□□ -1.21
PRDM2-206ENST00000413440 PREX1Q8TCU6 1659 aa7.49□□□□□ -1.21
PRDM2-206ENST00000413440 PLEKHG1Q9ULL1 1385 aa7.49□□□□□ -1.21
PRDM2-206ENST00000413440 TCOF1Q13428 1488 aaKnown RBP7.49□□□□□ -1.21
PRDM2-206ENST00000413440 MBD5Q9P267 1494 aa7.49□□□□□ -1.21
PRDM2-206ENST00000413440 NAIPQ13075 1403 aa7.49□□□□□ -1.21
PRDM2-206ENST00000413440 NGEFQ8N5V2 710 aa7.49□□□□□ -1.21
PRDM2-206ENST00000413440 EXOC5O00471 708 aa7.49□□□□□ -1.21
PRDM2-206ENST00000413440 APBA3O96018 575 aa7.49□□□□□ -1.21
PRDM2-206ENST00000413440 ANO8Q9HCE9 1232 aaPredicted RBP7.49□□□□□ -1.21
PRDM2-206ENST00000413440 ZMYM4Q5VZL5 1548 aa7.49□□□□□ -1.21
PRDM2-206ENST00000413440 BAG6P46379 1132 aa7.48□□□□□ -1.21
PRDM2-206ENST00000413440 RTL5Q5HYW3 569 aaPredicted RBP7.48□□□□□ -1.21
PRDM2-206ENST00000413440 PPRC1Q5VV67 1664 aaKnown RBP7.48□□□□□ -1.21
PRDM2-206ENST00000413440 PHF14O94880 888 aa7.48□□□□□ -1.21
PRDM2-206ENST00000413440 TTC5Q8N0Z6 440 aa7.48□□□□□ -1.21
PRDM2-206ENST00000413440 KIDINS220Q9ULH0 1771 aa7.48□□□□□ -1.21
PRDM2-206ENST00000413440 ZNF692Q9BU19 519 aaPredicted RBP7.48□□□□□ -1.21
PRDM2-206ENST00000413440 CGNL1Q0VF96 1302 aa7.48□□□□□ -1.21
PRDM2-206ENST00000413440 TRPM2O94759 1503 aa7.47□□□□□ -1.21
PRDM2-206ENST00000413440 ACEP12821 1306 aa7.47□□□□□ -1.21
PRDM2-206ENST00000413440 KCNH5Q8NCM2 988 aa7.47□□□□□ -1.21
PRDM2-206ENST00000413440 USHBP1Q8N6Y0 703 aa7.47□□□□□ -1.21
PRDM2-206ENST00000413440 STAC3Q96MF2 364 aa7.47□□□□□ -1.21
PRDM2-206ENST00000413440 WWC3Q9ULE0 1092 aa7.47□□□□□ -1.21
PRDM2-206ENST00000413440 RRS1Q15050 365 aaKnown RBP7.47□□□□□ -1.21
PRDM2-206ENST00000413440 PNNQ9H307 717 aaKnown RBP7.47□□□□□ -1.21
PRDM2-206ENST00000413440 CCDC61Q9Y6R9 512 aa7.47□□□□□ -1.21
PRDM2-206ENST00000413440 C3P01024 1663 aa7.47□□□□□ -1.21
PRDM2-206ENST00000413440 U2AF1L5P0DN76 240 aaPredicted RBP7.46□□□□□ -1.21
PRDM2-206ENST00000413440 U2AF1Q01081 240 aaKnown RBP eCLIP7.46□□□□□ -1.21
PRDM2-206ENST00000413440 C14orf93Q9H972 538 aaKnown RBP7.46□□□□□ -1.22
PRDM2-206ENST00000413440 FRMPD1Q5SYB0 1578 aa7.46□□□□□ -1.22
PRDM2-206ENST00000413440 PANK3Q9H999 370 aa7.46□□□□□ -1.22
PRDM2-206ENST00000413440 FAM182BQ5T319 152 aa7.45□□□□□ -1.22
PRDM2-206ENST00000413440 BRINP3Q76B58 766 aa7.45□□□□□ -1.22
PRDM2-206ENST00000413440 DDB1Q16531 1140 aa7.45□□□□□ -1.22
PRDM2-206ENST00000413440 JCADQ9P266 1359 aa7.45□□□□□ -1.22
PRDM2-206ENST00000413440 AGLP35573 1532 aa7.44□□□□□ -1.22
PRDM2-206ENST00000413440 CABP4P57796 275 aa7.44□□□□□ -1.22
PRDM2-206ENST00000413440 SLC12A5Q9H2X9 1139 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms