RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 KIF15Q9NS87 1388 aa13.59□□□□□ -0.23
PRPF40A-202ENST00000410080 CAGE1Q8TC20 777 aa13.59□□□□□ -0.23
PRPF40A-202ENST00000410080 ZNF771Q7L3S4 317 aaPredicted RBP13.58□□□□□ -0.23
PRPF40A-202ENST00000410080 MAP7D2Q96T17 732 aa13.58□□□□□ -0.23
PRPF40A-202ENST00000410080 PDILTQ8N807 584 aa13.58□□□□□ -0.24
PRPF40A-202ENST00000410080 FKBP5Q13451 457 aaPredicted RBP13.58□□□□□ -0.24
PRPF40A-202ENST00000410080 FAM69CQ0P6D2 419 aa13.58□□□□□ -0.24
PRPF40A-202ENST00000410080 RNF20Q5VTR2 975 aa13.58□□□□□ -0.24
PRPF40A-202ENST00000410080 MPHOSPH10O00566 681 aaKnown RBP13.57□□□□□ -0.24
PRPF40A-202ENST00000410080 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
PRPF40A-202ENST00000410080 DDX49Q9Y6V7 483 aaKnown RBP13.57□□□□□ -0.24
PRPF40A-202ENST00000410080 NEFHP12036 1026 aa13.57□□□□□ -0.24
PRPF40A-202ENST00000410080 CCDC173Q0VFZ6 552 aa13.57□□□□□ -0.24
PRPF40A-202ENST00000410080 NLRP2Q9NX02 1062 aa13.57□□□□□ -0.24
PRPF40A-202ENST00000410080 VPS37CA5D8V6 355 aaPredicted RBP13.57□□□□□ -0.24
PRPF40A-202ENST00000410080 UACAQ9BZF9 1416 aa13.56□□□□□ -0.24
PRPF40A-202ENST00000410080 ANKRD62A6NC57 917 aa13.56□□□□□ -0.24
PRPF40A-202ENST00000410080 KRT18P05783 430 aaKnown RBP13.56□□□□□ -0.24
PRPF40A-202ENST00000410080 DDX11L8A8MPP1 907 aa13.56□□□□□ -0.24
PRPF40A-202ENST00000410080 XBP1P17861 261 aa13.56□□□□□ -0.24
PRPF40A-202ENST00000410080 SASS6Q6UVJ0 657 aa13.56□□□□□ -0.24
PRPF40A-202ENST00000410080 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
PRPF40A-202ENST00000410080 TSPYL4Q9UJ04 414 aa13.55□□□□□ -0.24
PRPF40A-202ENST00000410080 CFAP65Q6ZU64 1925 aaKnown RBP13.55□□□□□ -0.24
PRPF40A-202ENST00000410080 TMEM87AQ8NBN3 555 aa13.55□□□□□ -0.24
PRPF40A-202ENST00000410080 NLRP13Q86W25 1043 aa13.55□□□□□ -0.24
PRPF40A-202ENST00000410080 OLFM4Q6UX06 510 aa13.54□□□□□ -0.24
PRPF40A-202ENST00000410080 HMOX1P09601 288 aa13.54□□□□□ -0.24
PRPF40A-202ENST00000410080 PTPRGP23470 1445 aa13.54□□□□□ -0.24
PRPF40A-202ENST00000410080 ZHX3Q9H4I2 956 aa13.54□□□□□ -0.24
PRPF40A-202ENST00000410080 MYBBP1AQ9BQG0 1328 aaKnown RBP13.54□□□□□ -0.24
PRPF40A-202ENST00000410080 CADPSQ9ULU8 1353 aa13.54□□□□□ -0.24
PRPF40A-202ENST00000410080 VGFO15240 615 aaPredicted RBP13.54□□□□□ -0.24
PRPF40A-202ENST00000410080 SLC3A2P08195 630 aaKnown RBP13.54□□□□□ -0.24
PRPF40A-202ENST00000410080 OSCARQ8IYS5 282 aa13.53□□□□□ -0.24
PRPF40A-202ENST00000410080 BRPF1P55201 1214 aaPredicted RBP13.53□□□□□ -0.24
PRPF40A-202ENST00000410080 SMARCA4P51532 1647 aa13.53□□□□□ -0.24
PRPF40A-202ENST00000410080 RSPH4AQ5TD94 716 aa13.53□□□□□ -0.24
PRPF40A-202ENST00000410080 NEBLO76041 1014 aa13.52□□□□□ -0.24
PRPF40A-202ENST00000410080 CDR1P51861 262 aa13.52□□□□□ -0.24
PRPF40A-202ENST00000410080 TEX35Q5T0J7 233 aa13.52□□□□□ -0.24
PRPF40A-202ENST00000410080 FAM161AQ3B820 660 aa13.52□□□□□ -0.25
PRPF40A-202ENST00000410080 SEPT7Q16181 437 aaKnown RBP13.52□□□□□ -0.25
PRPF40A-202ENST00000410080 CNNM1Q9NRU3 951 aa13.52□□□□□ -0.25
PRPF40A-202ENST00000410080 MYO6Q9UM54 1294 aa13.52□□□□□ -0.25
PRPF40A-202ENST00000410080 ZSCAN29Q8IWY8 852 aaPredicted RBP13.51□□□□□ -0.25
PRPF40A-202ENST00000410080 ATP2B1P20020 1258 aa13.51□□□□□ -0.25
PRPF40A-202ENST00000410080 CRBNQ96SW2 442 aa13.51□□□□□ -0.25
PRPF40A-202ENST00000410080 ROCK1Q13464 1354 aa13.51□□□□□ -0.25
PRPF40A-202ENST00000410080 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
PRPF40A-202ENST00000410080 SMC3Q9UQE7 1217 aa13.5□□□□□ -0.25
PRPF40A-202ENST00000410080 TBC1D2BQ9UPU7 963 aa13.5□□□□□ -0.25
PRPF40A-202ENST00000410080 RIPK4P57078 832 aa13.5□□□□□ -0.25
PRPF40A-202ENST00000410080 PDCL3Q9H2J4 239 aa13.5□□□□□ -0.25
PRPF40A-202ENST00000410080 MAGEC2Q9UBF1 373 aaPredicted RBP13.5□□□□□ -0.25
PRPF40A-202ENST00000410080 COG6Q9Y2V7 657 aa13.5□□□□□ -0.25
PRPF40A-202ENST00000410080 DNAJC2Q99543 621 aaKnown RBP13.5□□□□□ -0.25
PRPF40A-202ENST00000410080 REC8O95072 547 aa13.5□□□□□ -0.25
PRPF40A-202ENST00000410080 SART3Q15020 963 aaKnown RBP13.5□□□□□ -0.25
PRPF40A-202ENST00000410080 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
PRPF40A-202ENST00000410080 ESCO1Q5FWF5 840 aa13.49□□□□□ -0.25
PRPF40A-202ENST00000410080 ZRSR2Q15696 482 aaKnown RBP13.49□□□□□ -0.25
PRPF40A-202ENST00000410080 HSP90AB4PQ58FF6 505 aa13.49□□□□□ -0.25
PRPF40A-202ENST00000410080 TTLL12Q14166 644 aaPredicted RBP13.49□□□□□ -0.25
PRPF40A-202ENST00000410080 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
PRPF40A-202ENST00000410080 USP47Q96K76 1375 aa13.49□□□□□ -0.25
PRPF40A-202ENST00000410080 DIAPH1O60610 1272 aaKnown RBP13.49□□□□□ -0.25
PRPF40A-202ENST00000410080 PLCD4Q9BRC7 762 aa13.49□□□□□ -0.25
PRPF40A-202ENST00000410080 TTC39AQ5SRH9 613 aa13.48□□□□□ -0.25
PRPF40A-202ENST00000410080 ZKSCAN2Q63HK3 967 aa13.48□□□□□ -0.25
PRPF40A-202ENST00000410080 DHX37Q8IY37 1157 aaKnown RBP13.48□□□□□ -0.25
PRPF40A-202ENST00000410080 ERC2O15083 957 aa13.48□□□□□ -0.25
PRPF40A-202ENST00000410080 NINLQ9Y2I6 1382 aa13.48□□□□□ -0.25
PRPF40A-202ENST00000410080 DDX54Q8TDD1 881 aaKnown RBP13.48□□□□□ -0.25
PRPF40A-202ENST00000410080 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
PRPF40A-202ENST00000410080 PHLDB1Q86UU1 1377 aa13.48□□□□□ -0.25
PRPF40A-202ENST00000410080 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
PRPF40A-202ENST00000410080 SETD1BQ9UPS6 1966 aaKnown RBP13.47□□□□□ -0.25
PRPF40A-202ENST00000410080 CA8P35219 290 aa13.47□□□□□ -0.25
PRPF40A-202ENST00000410080 ENOX2Q16206 610 aaKnown RBP13.47□□□□□ -0.25
PRPF40A-202ENST00000410080 IFT57Q9NWB7 429 aa13.47□□□□□ -0.25
PRPF40A-202ENST00000410080 TXLNAP40222 546 aa13.47□□□□□ -0.25
PRPF40A-202ENST00000410080 APAF1O14727 1248 aa13.46□□□□□ -0.25
PRPF40A-202ENST00000410080 SEPT11Q9NVA2 429 aaKnown RBP13.46□□□□□ -0.25
PRPF40A-202ENST00000410080 CCDC73Q6ZRK6 1079 aa13.46□□□□□ -0.25
PRPF40A-202ENST00000410080 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.26
PRPF40A-202ENST00000410080 SPINK5Q9NQ38 1064 aaPredicted RBP13.45□□□□□ -0.26
PRPF40A-202ENST00000410080 ARHGAP5Q13017 1502 aa13.45□□□□□ -0.26
PRPF40A-202ENST00000410080 RAD54L2Q9Y4B4 1467 aa13.45□□□□□ -0.26
PRPF40A-202ENST00000410080 E9PSI1 815 aa13.45□□□□□ -0.26
PRPF40A-202ENST00000410080 NAT10Q9H0A0 1025 aaKnown RBP13.44□□□□□ -0.26
PRPF40A-202ENST00000410080 IPO9Q96P70 1041 aaKnown RBP13.44□□□□□ -0.26
PRPF40A-202ENST00000410080 TMEM132EQ6IEE7 984 aa13.44□□□□□ -0.26
PRPF40A-202ENST00000410080 GNL3LQ9NVN8 582 aaKnown RBP13.44□□□□□ -0.26
PRPF40A-202ENST00000410080 CHMP5Q9NZZ3 219 aa13.44□□□□□ -0.26
PRPF40A-202ENST00000410080 HSP90AA2PQ14568 343 aaPredicted RBP13.44□□□□□ -0.26
PRPF40A-202ENST00000410080 MNS1Q8NEH6 495 aa13.44□□□□□ -0.26
PRPF40A-202ENST00000410080 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
PRPF40A-202ENST00000410080 TRIM21P19474 475 aaKnown RBP13.43□□□□□ -0.26
PRPF40A-202ENST00000410080 DCTN1Q14203 1278 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms