RNA–Protein interactions for RNA: ENST00000409583.5

ITGB6-202, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 4,500 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-202ENST00000409583 KIAA1211Q6ZU35 1233 aa11.34□□□□□ -0.59
ITGB6-202ENST00000409583 MTERF4Q7Z6M4 381 aaKnown RBP11.34□□□□□ -0.59
ITGB6-202ENST00000409583 AKNAQ7Z591 1439 aa11.33□□□□□ -0.59
ITGB6-202ENST00000409583 GPATCH8Q9UKJ3 1502 aaKnown RBP11.33□□□□□ -0.6
ITGB6-202ENST00000409583 TTC5Q8N0Z6 440 aa11.33□□□□□ -0.6
ITGB6-202ENST00000409583 TSPYL4Q9UJ04 414 aa11.33□□□□□ -0.6
ITGB6-202ENST00000409583 PTPRKQ15262 1439 aa11.32□□□□□ -0.6
ITGB6-202ENST00000409583 FKBP5Q13451 457 aaPredicted RBP11.32□□□□□ -0.6
ITGB6-202ENST00000409583 ANKRD45Q5TZF3 282 aa11.32□□□□□ -0.6
ITGB6-202ENST00000409583 RRS1Q15050 365 aaKnown RBP11.32□□□□□ -0.6
ITGB6-202ENST00000409583 GZF1Q9H116 711 aaPredicted RBP11.32□□□□□ -0.6
ITGB6-202ENST00000409583 NUP153P49790 1475 aaKnown RBP11.32□□□□□ -0.6
ITGB6-202ENST00000409583 TULP1O00294 542 aaPredicted RBP11.32□□□□□ -0.6
ITGB6-202ENST00000409583 MCCP23508 829 aa11.31□□□□□ -0.6
ITGB6-202ENST00000409583 PANK1Q8TE04 598 aa11.31□□□□□ -0.6
ITGB6-202ENST00000409583 ISY1Q9ULR0 285 aaKnown RBP11.31□□□□□ -0.6
ITGB6-202ENST00000409583 MAP3K1Q13233 1512 aa11.31□□□□□ -0.6
ITGB6-202ENST00000409583 CHAF1AQ13111 956 aaPredicted RBP11.31□□□□□ -0.6
ITGB6-202ENST00000409583 ZNF771Q7L3S4 317 aaPredicted RBP11.31□□□□□ -0.6
ITGB6-202ENST00000409583 BRD4O60885 1362 aaPredicted RBP11.31□□□□□ -0.6
ITGB6-202ENST00000409583 GPRASP1Q5JY77 1395 aa11.31□□□□□ -0.6
ITGB6-202ENST00000409583 SULT6B1Q6IMI4 303 aa11.3□□□□□ -0.6
ITGB6-202ENST00000409583 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
ITGB6-202ENST00000409583 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
ITGB6-202ENST00000409583 RTEL1-TNFRSF6BF6WH68 1400 aa11.3□□□□□ -0.6
ITGB6-202ENST00000409583 DZIP1LQ8IYY4 767 aaKnown RBP11.3□□□□□ -0.6
ITGB6-202ENST00000409583 STRN4Q9NRL3 753 aa11.3□□□□□ -0.6
ITGB6-202ENST00000409583 TSR2Q969E8 191 aaKnown RBP11.29□□□□□ -0.6
ITGB6-202ENST00000409583 PDCL3Q9H2J4 239 aa11.29□□□□□ -0.6
ITGB6-202ENST00000409583 KIF21AQ7Z4S6 1674 aa11.29□□□□□ -0.6
ITGB6-202ENST00000409583 AIMP1Q12904 312 aaKnown RBP11.29□□□□□ -0.6
ITGB6-202ENST00000409583 PNISRQ8TF01 805 aaKnown RBP11.29□□□□□ -0.6
ITGB6-202ENST00000409583 ZNF428Q96B54 188 aa11.29□□□□□ -0.6
ITGB6-202ENST00000409583 C9orf78Q9NZ63 289 aaPredicted RBP11.29□□□□□ -0.6
ITGB6-202ENST00000409583 RPGRIP1LQ68CZ1 1315 aa11.29□□□□□ -0.6
ITGB6-202ENST00000409583 ZRSR1Q15695 479 aaKnown RBP11.28□□□□□ -0.6
ITGB6-202ENST00000409583 ASXL2Q76L83 1435 aa11.28□□□□□ -0.6
ITGB6-202ENST00000409583 POGZQ7Z3K3 1410 aa11.28□□□□□ -0.6
ITGB6-202ENST00000409583 GNAI1P63096 354 aa11.28□□□□□ -0.6
ITGB6-202ENST00000409583 NFKBIBQ15653 356 aa11.28□□□□□ -0.6
ITGB6-202ENST00000409583 CCDC61Q9Y6R9 512 aa11.28□□□□□ -0.6
ITGB6-202ENST00000409583 DENND4BO75064 1496 aaPredicted RBP11.28□□□□□ -0.6
ITGB6-202ENST00000409583 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
ITGB6-202ENST00000409583 NUDT16Q96DE0 195 aaKnown RBP11.28□□□□□ -0.6
ITGB6-202ENST00000409583 RILPL2Q969X0 211 aa11.27□□□□□ -0.6
ITGB6-202ENST00000409583 HDAC5Q9UQL6 1122 aa11.27□□□□□ -0.6
ITGB6-202ENST00000409583 ZC3H6P61129 1189 aaKnown RBP11.27□□□□□ -0.61
ITGB6-202ENST00000409583 EXOSC9Q06265 439 aaKnown RBP11.27□□□□□ -0.61
ITGB6-202ENST00000409583 NEXNQ0ZGT2 675 aa11.27□□□□□ -0.61
ITGB6-202ENST00000409583 AAMPQ13685 434 aa11.27□□□□□ -0.61
ITGB6-202ENST00000409583 FRAT2O75474 233 aaPredicted RBP11.26□□□□□ -0.61
ITGB6-202ENST00000409583 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.26□□□□□ -0.61
ITGB6-202ENST00000409583 CENPQQ7L2Z9 268 aaPredicted RBP11.26□□□□□ -0.61
ITGB6-202ENST00000409583 RAPGEF6Q8TEU7 1601 aa11.26□□□□□ -0.61
ITGB6-202ENST00000409583 MEX3CQ5U5Q3 659 aaKnown RBP11.25□□□□□ -0.61
ITGB6-202ENST00000409583 DDX19BQ9UMR2 479 aa11.25□□□□□ -0.61
ITGB6-202ENST00000409583 DHX29Q7Z478 1369 aaKnown RBP11.25□□□□□ -0.61
ITGB6-202ENST00000409583 SLC4A3P48751 1232 aa11.25□□□□□ -0.61
ITGB6-202ENST00000409583 ZNF692Q9BU19 519 aaPredicted RBP11.25□□□□□ -0.61
ITGB6-202ENST00000409583 API5Q9BZZ5 524 aaKnown RBP11.25□□□□□ -0.61
ITGB6-202ENST00000409583 NUTM2BA6NNL0 878 aaPredicted RBP11.24□□□□□ -0.61
ITGB6-202ENST00000409583 NUTM2EB1AL46 878 aaPredicted RBP11.24□□□□□ -0.61
ITGB6-202ENST00000409583 NUTM2AQ8IVF1 878 aaPredicted RBP11.24□□□□□ -0.61
ITGB6-202ENST00000409583 GPATCH3Q96I76 525 aa11.24□□□□□ -0.61
ITGB6-202ENST00000409583 LNPKQ9C0E8 428 aa11.24□□□□□ -0.61
ITGB6-202ENST00000409583 GOLGA6L4A6NEF3 574 aa11.24□□□□□ -0.61
ITGB6-202ENST00000409583 FOXO3O43524 673 aa11.24□□□□□ -0.61
ITGB6-202ENST00000409583 AMOTL2Q9Y2J4 779 aa11.24□□□□□ -0.61
ITGB6-202ENST00000409583 NSD3Q9BZ95 1437 aa11.24□□□□□ -0.61
ITGB6-202ENST00000409583 PATL2C9JE40 543 aaKnown RBP11.23□□□□□ -0.61
ITGB6-202ENST00000409583 BCAR3O75815 825 aa11.23□□□□□ -0.61
ITGB6-202ENST00000409583 NOS1P29475 1434 aa11.23□□□□□ -0.61
ITGB6-202ENST00000409583 TRAPPC8Q9Y2L5 1435 aa11.23□□□□□ -0.61
ITGB6-202ENST00000409583 ADAMTS12P58397 1594 aa11.23□□□□□ -0.61
ITGB6-202ENST00000409583 PLCH2O75038 1416 aa11.23□□□□□ -0.61
ITGB6-202ENST00000409583 PDE4AP27815 886 aa11.23□□□□□ -0.61
ITGB6-202ENST00000409583 EIF4G3O43432 1585 aaKnown RBP11.23□□□□□ -0.61
ITGB6-202ENST00000409583 NME9Q86XW9 330 aa11.23□□□□□ -0.61
ITGB6-202ENST00000409583 THUMPD2Q9BTF0 503 aaKnown RBP11.23□□□□□ -0.61
ITGB6-202ENST00000409583 TAF3Q5VWG9 929 aa11.22□□□□□ -0.61
ITGB6-202ENST00000409583 PRDM11Q9NQV5 511 aa11.22□□□□□ -0.61
ITGB6-202ENST00000409583 ATAD2Q6PL18 1390 aa11.22□□□□□ -0.61
ITGB6-202ENST00000409583 PIP4K2BP78356 416 aa11.22□□□□□ -0.61
ITGB6-202ENST00000409583 KIF16BQ96L93 1317 aa11.22□□□□□ -0.61
ITGB6-202ENST00000409583 DDX54Q8TDD1 881 aaKnown RBP11.22□□□□□ -0.61
ITGB6-202ENST00000409583 CFAP44Q96MT7 982 aa11.22□□□□□ -0.61
ITGB6-202ENST00000409583 ZHX1Q9UKY1 873 aaPredicted RBP11.22□□□□□ -0.61
ITGB6-202ENST00000409583 SYCP2Q9BX26 1530 aa11.22□□□□□ -0.61
ITGB6-202ENST00000409583 TOMM22Q9NS69 142 aa11.21□□□□□ -0.61
ITGB6-202ENST00000409583 RPRD2Q5VT52 1461 aaKnown RBP11.21□□□□□ -0.61
ITGB6-202ENST00000409583 FBLN1P23142 703 aa11.21□□□□□ -0.61
ITGB6-202ENST00000409583 UGGT2Q9NYU1 1516 aa11.21□□□□□ -0.62
ITGB6-202ENST00000409583 TOM1L2Q6ZVM7 507 aa11.21□□□□□ -0.62
ITGB6-202ENST00000409583 RIC3Q7Z5B4 369 aa11.21□□□□□ -0.62
ITGB6-202ENST00000409583 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.62
ITGB6-202ENST00000409583 DDX58O95786 925 aaKnown RBP11.2□□□□□ -0.62
ITGB6-202ENST00000409583 TWISTNBQ3B726 338 aaPredicted RBP11.2□□□□□ -0.62
ITGB6-202ENST00000409583 ZNF530Q6P9A1 599 aaPredicted RBP11.2□□□□□ -0.62
ITGB6-202ENST00000409583 FAM177BA6PVY3 158 aa11.2□□□□□ -0.62
ITGB6-202ENST00000409583 TMX4Q9H1E5 349 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms