RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 KNDC1Q76NI1 1749 aa24.47■■□□□ 1.51
PTCHD3P3-201ENST00000403073 SCAF1Q9H7N4 1312 aaKnown RBP24.46■■□□□ 1.51
PTCHD3P3-201ENST00000403073 CARD11Q9BXL7 1154 aa24.46■■□□□ 1.51
PTCHD3P3-201ENST00000403073 SLAIN2Q9P270 581 aa24.45■■□□□ 1.5
PTCHD3P3-201ENST00000403073 RALGAPBQ86X10 1494 aa24.45■■□□□ 1.5
PTCHD3P3-201ENST00000403073 GPRASP1Q5JY77 1395 aa24.44■■□□□ 1.5
PTCHD3P3-201ENST00000403073 MINK1Q8N4C8 1332 aaPredicted RBP24.42■■□□□ 1.5
PTCHD3P3-201ENST00000403073 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.42■■□□□ 1.5
PTCHD3P3-201ENST00000403073 ILDR1Q86SU0 546 aaPredicted RBP24.42■■□□□ 1.5
PTCHD3P3-201ENST00000403073 HIRIP3Q9BW71 556 aaPredicted RBP24.42■■□□□ 1.5
PTCHD3P3-201ENST00000403073 DCCP43146 1447 aa24.4■■□□□ 1.5
PTCHD3P3-201ENST00000403073 NALCNQ8IZF0 1738 aa24.4■■□□□ 1.5
PTCHD3P3-201ENST00000403073 CENPJQ9HC77 1338 aaPredicted RBP24.38■■□□□ 1.49
PTCHD3P3-201ENST00000403073 NUTM2FA1L443 756 aa24.37■■□□□ 1.49
PTCHD3P3-201ENST00000403073 MST1RQ04912 1400 aa24.36■■□□□ 1.49
PTCHD3P3-201ENST00000403073 ARHGEF28Q8N1W1 1705 aaKnown RBP24.35■■□□□ 1.49
PTCHD3P3-201ENST00000403073 EIF3AQ14152 1382 aaKnown RBP24.32■■□□□ 1.48
PTCHD3P3-201ENST00000403073 WASLO00401 505 aaPredicted RBP24.32■■□□□ 1.48
PTCHD3P3-201ENST00000403073 CDC42BPGQ6DT37 1551 aa24.32■■□□□ 1.48
PTCHD3P3-201ENST00000403073 C1orf167Q5SNV9 1468 aa24.32■■□□□ 1.48
PTCHD3P3-201ENST00000403073 BRINP3Q76B58 766 aa24.31■■□□□ 1.48
PTCHD3P3-201ENST00000403073 ORAI2Q96SN7 254 aa24.31■■□□□ 1.48
PTCHD3P3-201ENST00000403073 CDK19Q9BWU1 502 aa24.3■■□□□ 1.48
PTCHD3P3-201ENST00000403073 HSPA1LP34931 641 aa24.28■■□□□ 1.48
PTCHD3P3-201ENST00000403073 ESCO1Q5FWF5 840 aa24.28■■□□□ 1.48
PTCHD3P3-201ENST00000403073 ST20-MTHFSA0A0A6YYL1 179 aa24.27■■□□□ 1.48
PTCHD3P3-201ENST00000403073 ADGRB2O60241 1585 aa24.25■■□□□ 1.47
PTCHD3P3-201ENST00000403073 USP47Q96K76 1375 aa24.25■■□□□ 1.47
PTCHD3P3-201ENST00000403073 PRR36Q9H6K5 1346 aa24.24■■□□□ 1.47
PTCHD3P3-201ENST00000403073 ROBO1Q9Y6N7 1651 aa24.24■■□□□ 1.47
PTCHD3P3-201ENST00000403073 SRPK2P78362 688 aaKnown RBP24.23■■□□□ 1.47
PTCHD3P3-201ENST00000403073 DDX17Q92841 729 aaKnown RBP24.23■■□□□ 1.47
PTCHD3P3-201ENST00000403073 CABP2Q9NPB3 220 aa24.23■■□□□ 1.47
PTCHD3P3-201ENST00000403073 FMN2Q9NZ56 1722 aa24.22■■□□□ 1.47
PTCHD3P3-201ENST00000403073 NUDT16Q96DE0 195 aaKnown RBP24.22■■□□□ 1.47
PTCHD3P3-201ENST00000403073 QRICH2Q9H0J4 1663 aa24.21■■□□□ 1.47
PTCHD3P3-201ENST00000403073 EVC2Q86UK5 1308 aa24.21■■□□□ 1.47
PTCHD3P3-201ENST00000403073 TESK2Q96S53 571 aa24.2■■□□□ 1.46
PTCHD3P3-201ENST00000403073 ANKARQ7Z5J8 1434 aa24.19■■□□□ 1.46
PTCHD3P3-201ENST00000403073 PHF8Q9UPP1 1060 aa24.19■■□□□ 1.46
PTCHD3P3-201ENST00000403073 FOXO3O43524 673 aa24.18■■□□□ 1.46
PTCHD3P3-201ENST00000403073 PMFBP1Q8TBY8 1022 aa24.18■■□□□ 1.46
PTCHD3P3-201ENST00000403073 TULP4Q9NRJ4 1543 aa24.18■■□□□ 1.46
PTCHD3P3-201ENST00000403073 SBNO2Q9Y2G9 1366 aa24.17■■□□□ 1.46
PTCHD3P3-201ENST00000403073 EIF4G2P78344 907 aaKnown RBP eCLIP24.16■■□□□ 1.46
PTCHD3P3-201ENST00000403073 USP32Q8NFA0 1604 aa24.15■■□□□ 1.46
PTCHD3P3-201ENST00000403073 HSPA5P11021 654 aaKnown RBP24.15■■□□□ 1.46
PTCHD3P3-201ENST00000403073 CCDC61Q9Y6R9 512 aa24.15■■□□□ 1.46
PTCHD3P3-201ENST00000403073 XPCQ01831 940 aaPredicted RBP24.14■■□□□ 1.45
PTCHD3P3-201ENST00000403073 ATP7BP35670 1465 aa24.13■■□□□ 1.45
PTCHD3P3-201ENST00000403073 NPHP3Q7Z494 1330 aa24.1■■□□□ 1.45
PTCHD3P3-201ENST00000403073 AHDC1Q5TGY3 1603 aaPredicted RBP24.1■■□□□ 1.45
PTCHD3P3-201ENST00000403073 SLC24A1O60721 1099 aa24.1■■□□□ 1.45
PTCHD3P3-201ENST00000403073 NGDNQ8NEJ9 315 aaKnown RBP24.1■■□□□ 1.45
PTCHD3P3-201ENST00000403073 CABP1Q9NZU7 370 aa24.1■■□□□ 1.45
PTCHD3P3-201ENST00000403073 PLEKHG3A1L390 1219 aa24.09■■□□□ 1.45
PTCHD3P3-201ENST00000403073 TMF1P82094 1093 aa24.09■■□□□ 1.45
PTCHD3P3-201ENST00000403073 PSME1Q06323 249 aa24.09■■□□□ 1.45
PTCHD3P3-201ENST00000403073 KRT28Q7Z3Y7 464 aa24.09■■□□□ 1.45
PTCHD3P3-201ENST00000403073 SOS2Q07890 1332 aaPredicted RBP24.09■■□□□ 1.45
PTCHD3P3-201ENST00000403073 RGPD8O14715 1765 aaPredicted RBP24.08■■□□□ 1.44
PTCHD3P3-201ENST00000403073 PPIP5K1Q6PFW1 1433 aa24.08■■□□□ 1.44
PTCHD3P3-201ENST00000403073 DISP3Q9P2K9 1392 aa24.07■■□□□ 1.44
PTCHD3P3-201ENST00000403073 PHLPP1O60346 1717 aa24.07■■□□□ 1.44
PTCHD3P3-201ENST00000403073 LRRC59Q96AG4 307 aaKnown RBP24.06■■□□□ 1.44
PTCHD3P3-201ENST00000403073 ACEP12821 1306 aa24.06■■□□□ 1.44
PTCHD3P3-201ENST00000403073 NHSL1Q5SYE7 1610 aa24.05■■□□□ 1.44
PTCHD3P3-201ENST00000403073 ATAD2Q6PL18 1390 aa24.04■■□□□ 1.44
PTCHD3P3-201ENST00000403073 COL16A1Q07092 1604 aaPredicted RBP24.04■■□□□ 1.44
PTCHD3P3-201ENST00000403073 PUS7Q96PZ0 661 aaKnown RBP24.04■■□□□ 1.44
PTCHD3P3-201ENST00000403073 PXDNQ92626 1479 aa24.04■■□□□ 1.44
PTCHD3P3-201ENST00000403073 KIF1AQ12756 1690 aa24.03■■□□□ 1.44
PTCHD3P3-201ENST00000403073 TMC1Q8TDI8 760 aa24.03■■□□□ 1.44
PTCHD3P3-201ENST00000403073 ZEB1P37275 1124 aaPredicted RBP24.02■■□□□ 1.44
PTCHD3P3-201ENST00000403073 SLC12A5Q9H2X9 1139 aa24.01■■□□□ 1.43
PTCHD3P3-201ENST00000403073 POLR3AO14802 1390 aaPredicted RBP24.01■■□□□ 1.43
PTCHD3P3-201ENST00000403073 CDCA8Q53HL2 280 aa24■■□□□ 1.43
PTCHD3P3-201ENST00000403073 JCADQ9P266 1359 aa24■■□□□ 1.43
PTCHD3P3-201ENST00000403073 TOPAZ1Q8N9V7 1692 aa23.99■■□□□ 1.43
PTCHD3P3-201ENST00000403073 SPATA31A3Q5VYP0 1347 aa23.98■■□□□ 1.43
PTCHD3P3-201ENST00000403073 C11orf95C9JLR9 678 aaPredicted RBP23.97■■□□□ 1.43
PTCHD3P3-201ENST00000403073 PAK3O75914 559 aaPredicted RBP23.97■■□□□ 1.43
PTCHD3P3-201ENST00000403073 ITSN1Q15811 1721 aa23.96■■□□□ 1.43
PTCHD3P3-201ENST00000403073 LMOD2Q6P5Q4 547 aa23.96■■□□□ 1.43
PTCHD3P3-201ENST00000403073 POLR3GLQ9BT43 218 aa23.96■■□□□ 1.43
PTCHD3P3-201ENST00000403073 SBNO1A3KN83 1393 aa23.95■■□□□ 1.42
PTCHD3P3-201ENST00000403073 PNPLA6Q8IY17 1366 aa23.95■■□□□ 1.42
PTCHD3P3-201ENST00000403073 ZNF692Q9BU19 519 aaPredicted RBP23.93■■□□□ 1.42
PTCHD3P3-201ENST00000403073 NUTM2BA6NNL0 878 aaPredicted RBP23.92■■□□□ 1.42
PTCHD3P3-201ENST00000403073 NUTM2EB1AL46 878 aaPredicted RBP23.92■■□□□ 1.42
PTCHD3P3-201ENST00000403073 PLEKHG5O94827 1062 aa23.92■■□□□ 1.42
PTCHD3P3-201ENST00000403073 NUTM2AQ8IVF1 878 aaPredicted RBP23.92■■□□□ 1.42
PTCHD3P3-201ENST00000403073 TNS3Q68CZ2 1445 aa23.92■■□□□ 1.42
PTCHD3P3-201ENST00000403073 CPSF1Q10570 1443 aaKnown RBP23.91■■□□□ 1.42
PTCHD3P3-201ENST00000403073 HDGFL2Q7Z4V5 671 aaPredicted RBP23.9■■□□□ 1.42
PTCHD3P3-201ENST00000403073 TERF2IPQ9NYB0 399 aa23.9■■□□□ 1.42
PTCHD3P3-201ENST00000403073 USP6P35125 1406 aa23.9■■□□□ 1.42
PTCHD3P3-201ENST00000403073 KTN1Q86UP2 1357 aaKnown RBP23.9■■□□□ 1.42
PTCHD3P3-201ENST00000403073 SPATA31A6Q5VVP1 1343 aa23.89■■□□□ 1.42
PTCHD3P3-201ENST00000403073 CD163L1Q9NR16 1453 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms