RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 KDM5CP41229 1560 aa23.31■■□□□ 1.32
GAREM2-201ENST00000401533 DUSP27Q5VZP5 1158 aa23.31■■□□□ 1.32
GAREM2-201ENST00000401533 NSD3Q9BZ95 1437 aa23.31■■□□□ 1.32
GAREM2-201ENST00000401533 FBLN1P23142 703 aa23.31■■□□□ 1.32
GAREM2-201ENST00000401533 PLA2R1Q13018 1463 aa23.31■■□□□ 1.32
GAREM2-201ENST00000401533 PER1O15534 1290 aaPredicted RBP23.3■■□□□ 1.32
GAREM2-201ENST00000401533 FBXO31Q5XUX0 539 aaPredicted RBP23.3■■□□□ 1.32
GAREM2-201ENST00000401533 UHRF1BP1LA0JNW5 1464 aa23.3■■□□□ 1.32
GAREM2-201ENST00000401533 TRIM44Q96DX7 344 aaPredicted RBP23.3■■□□□ 1.32
GAREM2-201ENST00000401533 ZCCHC11Q5TAX3 1644 aaKnown RBP23.29■■□□□ 1.32
GAREM2-201ENST00000401533 CDK19Q9BWU1 502 aa23.29■■□□□ 1.32
GAREM2-201ENST00000401533 IDI1Q13907 227 aa23.29■■□□□ 1.32
GAREM2-201ENST00000401533 WAPLQ7Z5K2 1190 aa23.29■■□□□ 1.32
GAREM2-201ENST00000401533 EID1Q9Y6B2 187 aa23.28■■□□□ 1.32
GAREM2-201ENST00000401533 BCORL1Q5H9F3 1711 aa23.28■■□□□ 1.32
GAREM2-201ENST00000401533 A2MP01023 1474 aa23.28■■□□□ 1.32
GAREM2-201ENST00000401533 AMER1Q5JTC6 1135 aaPredicted RBP23.28■■□□□ 1.32
GAREM2-201ENST00000401533 FANCAO15360 1455 aa23.28■■□□□ 1.32
GAREM2-201ENST00000401533 THUMPD2Q9BTF0 503 aaKnown RBP23.28■■□□□ 1.32
GAREM2-201ENST00000401533 C1orf115Q9H7X2 142 aa23.28■■□□□ 1.32
GAREM2-201ENST00000401533 HAP1P54257 671 aaPredicted RBP23.27■■□□□ 1.32
GAREM2-201ENST00000401533 NOL8Q76FK4 1167 aaKnown RBP23.27■■□□□ 1.32
GAREM2-201ENST00000401533 DDX19BQ9UMR2 479 aa23.27■■□□□ 1.32
GAREM2-201ENST00000401533 PDZRN3Q9UPQ7 1066 aa23.27■■□□□ 1.32
GAREM2-201ENST00000401533 NGEFQ8N5V2 710 aa23.26■■□□□ 1.31
GAREM2-201ENST00000401533 WDR7Q9Y4E6 1490 aa23.26■■□□□ 1.31
GAREM2-201ENST00000401533 ADGRL1O94910 1474 aa23.25■■□□□ 1.31
GAREM2-201ENST00000401533 CLASP1Q7Z460 1538 aa23.25■■□□□ 1.31
GAREM2-201ENST00000401533 NFKBIBQ15653 356 aa23.25■■□□□ 1.31
GAREM2-201ENST00000401533 TAOK2Q9UL54 1235 aa23.25■■□□□ 1.31
GAREM2-201ENST00000401533 STK31Q9BXU1 1019 aa23.25■■□□□ 1.31
GAREM2-201ENST00000401533 MAST1Q9Y2H9 1570 aa23.24■■□□□ 1.31
GAREM2-201ENST00000401533 NOB1Q9ULX3 412 aaKnown RBP23.22■■□□□ 1.31
GAREM2-201ENST00000401533 PDE3AQ14432 1141 aa23.21■■□□□ 1.31
GAREM2-201ENST00000401533 RRS1Q15050 365 aaKnown RBP23.21■■□□□ 1.31
GAREM2-201ENST00000401533 LMOD3Q0VAK6 560 aa23.21■■□□□ 1.31
GAREM2-201ENST00000401533 NOS1P29475 1434 aa23.21■■□□□ 1.31
GAREM2-201ENST00000401533 ABCC1P33527 1531 aa23.21■■□□□ 1.31
GAREM2-201ENST00000401533 ASXL2Q76L83 1435 aa23.2■■□□□ 1.31
GAREM2-201ENST00000401533 FOXD4L5Q5VV16 416 aaPredicted RBP23.2■■□□□ 1.31
GAREM2-201ENST00000401533 FOXD4L4Q8WXT5 416 aaPredicted RBP23.2■■□□□ 1.31
GAREM2-201ENST00000401533 CD109Q6YHK3 1445 aa23.2■■□□□ 1.3
GAREM2-201ENST00000401533 TRIM6-TRIM34B2RNG4 842 aa23.19■■□□□ 1.3
GAREM2-201ENST00000401533 GSE1Q14687 1217 aa23.19■■□□□ 1.3
GAREM2-201ENST00000401533 SLC26A8Q96RN1 970 aa23.19■■□□□ 1.3
GAREM2-201ENST00000401533 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.19■■□□□ 1.3
GAREM2-201ENST00000401533 PLXNC1O60486 1568 aa23.19■■□□□ 1.3
GAREM2-201ENST00000401533 FRAT2O75474 233 aaPredicted RBP23.19■■□□□ 1.3
GAREM2-201ENST00000401533 SLC52A1Q9NWF4 448 aa23.18■■□□□ 1.3
GAREM2-201ENST00000401533 PARD3Q8TEW0 1356 aa23.18■■□□□ 1.3
GAREM2-201ENST00000401533 KCNJ4P48050 445 aa23.18■■□□□ 1.3
GAREM2-201ENST00000401533 RTEL1-TNFRSF6BF6WH68 1400 aa23.18■■□□□ 1.3
GAREM2-201ENST00000401533 CARD14Q9BXL6 1004 aa23.18■■□□□ 1.3
GAREM2-201ENST00000401533 SPINK5Q9NQ38 1064 aaPredicted RBP23.17■■□□□ 1.3
GAREM2-201ENST00000401533 UNC13BO14795 1591 aa23.17■■□□□ 1.3
GAREM2-201ENST00000401533 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
GAREM2-201ENST00000401533 PLCB2Q00722 1185 aa23.15■■□□□ 1.3
GAREM2-201ENST00000401533 GPRASP1Q5JY77 1395 aa23.15■■□□□ 1.3
GAREM2-201ENST00000401533 SCAF11Q99590 1463 aaKnown RBP23.15■■□□□ 1.3
GAREM2-201ENST00000401533 TMPOP42166 694 aaKnown RBP23.15■■□□□ 1.3
GAREM2-201ENST00000401533 EIF2S2P20042 333 aaKnown RBP23.14■■□□□ 1.3
GAREM2-201ENST00000401533 RARSP54136 660 aaKnown RBP23.14■■□□□ 1.29
GAREM2-201ENST00000401533 TNNQ9UQP3 1299 aa23.13■■□□□ 1.29
GAREM2-201ENST00000401533 IQGAP3Q86VI3 1631 aa23.13■■□□□ 1.29
GAREM2-201ENST00000401533 PLEKHH1Q9ULM0 1364 aa23.12■■□□□ 1.29
GAREM2-201ENST00000401533 DCTN1Q14203 1278 aa23.12■■□□□ 1.29
GAREM2-201ENST00000401533 C22orf23Q9BZE7 217 aa23.12■■□□□ 1.29
GAREM2-201ENST00000401533 KIF16BQ96L93 1317 aa23.12■■□□□ 1.29
GAREM2-201ENST00000401533 IGHDP01880 384 aa23.12■■□□□ 1.29
GAREM2-201ENST00000401533 GNAI1P63096 354 aa23.12■■□□□ 1.29
GAREM2-201ENST00000401533 FOXD4L6Q3SYB3 417 aaPredicted RBP23.12■■□□□ 1.29
GAREM2-201ENST00000401533 FOXD4L3Q6VB84 417 aaPredicted RBP23.12■■□□□ 1.29
GAREM2-201ENST00000401533 SULT6B1Q6IMI4 303 aa23.11■■□□□ 1.29
GAREM2-201ENST00000401533 WDR63Q8IWG1 891 aa23.11■■□□□ 1.29
GAREM2-201ENST00000401533 C14orf93Q9H972 538 aaKnown RBP23.11■■□□□ 1.29
GAREM2-201ENST00000401533 NAP1L5Q96NT1 182 aaPredicted RBP23.1■■□□□ 1.29
GAREM2-201ENST00000401533 SSH1Q8WYL5 1049 aa23.1■■□□□ 1.29
GAREM2-201ENST00000401533 RILPL2Q969X0 211 aa23.1■■□□□ 1.29
GAREM2-201ENST00000401533 CSB-PGBD3P0DP91 1061 aa23.09■■□□□ 1.29
GAREM2-201ENST00000401533 ATF7IPQ6VMQ6 1270 aa23.09■■□□□ 1.29
GAREM2-201ENST00000401533 ZNF330Q9Y3S2 320 aaPredicted RBP23.09■■□□□ 1.29
GAREM2-201ENST00000401533 ZNF428Q96B54 188 aa23.08■■□□□ 1.29
GAREM2-201ENST00000401533 HMMRO75330 724 aa23.08■■□□□ 1.29
GAREM2-201ENST00000401533 MVPQ14764 893 aaKnown RBP23.08■■□□□ 1.29
GAREM2-201ENST00000401533 EMILIN1Q9Y6C2 1016 aa23.08■■□□□ 1.29
GAREM2-201ENST00000401533 ATP7AQ04656 1500 aa23.08■■□□□ 1.28
GAREM2-201ENST00000401533 NLRP6P59044 892 aa23.08■■□□□ 1.28
GAREM2-201ENST00000401533 TWISTNBQ3B726 338 aaPredicted RBP23.08■■□□□ 1.28
GAREM2-201ENST00000401533 DMRT2Q9Y5R5 561 aa23.08■■□□□ 1.28
GAREM2-201ENST00000401533 POLR1AO95602 1720 aaPredicted RBP23.07■■□□□ 1.28
GAREM2-201ENST00000401533 PTMAP06454 111 aaKnown RBP23.07■■□□□ 1.28
GAREM2-201ENST00000401533 NME9Q86XW9 330 aa23.07■■□□□ 1.28
GAREM2-201ENST00000401533 TMEM57Q8N5G2 664 aa23.07■■□□□ 1.28
GAREM2-201ENST00000401533 RPGRIP1LQ68CZ1 1315 aa23.07■■□□□ 1.28
GAREM2-201ENST00000401533 ATP10AO60312 1499 aa23.06■■□□□ 1.28
GAREM2-201ENST00000401533 FKBP5Q13451 457 aaPredicted RBP23.06■■□□□ 1.28
GAREM2-201ENST00000401533 TSPYL4Q9UJ04 414 aa23.06■■□□□ 1.28
GAREM2-201ENST00000401533 COL17A1Q9UMD9 1497 aaPredicted RBP23.06■■□□□ 1.28
GAREM2-201ENST00000401533 GBP4Q96PP9 640 aa23.06■■□□□ 1.28
GAREM2-201ENST00000401533 NAP1L2Q9ULW6 460 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms