RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SIRT1Q96EB6 747 aa20.36■□□□□ 0.85
HLA-DQB1-202ENST00000399079 C1orf167Q5SNV9 1468 aa20.34■□□□□ 0.85
HLA-DQB1-202ENST00000399079 NUTM2FA1L443 756 aa20.33■□□□□ 0.85
HLA-DQB1-202ENST00000399079 NBPF1Q3BBV0 1214 aa20.33■□□□□ 0.85
HLA-DQB1-202ENST00000399079 ORAI2Q96SN7 254 aa20.33■□□□□ 0.85
HLA-DQB1-202ENST00000399079 DDX17Q92841 729 aaKnown RBP20.32■□□□□ 0.84
HLA-DQB1-202ENST00000399079 POGKQ9P215 609 aa20.32■□□□□ 0.84
HLA-DQB1-202ENST00000399079 PHLPP1O60346 1717 aa20.32■□□□□ 0.84
HLA-DQB1-202ENST00000399079 DISP3Q9P2K9 1392 aa20.31■□□□□ 0.84
HLA-DQB1-202ENST00000399079 DLC1Q96QB1 1528 aa20.31■□□□□ 0.84
HLA-DQB1-202ENST00000399079 CDC42BPGQ6DT37 1551 aa20.3■□□□□ 0.84
HLA-DQB1-202ENST00000399079 COL16A1Q07092 1604 aaPredicted RBP20.28■□□□□ 0.84
HLA-DQB1-202ENST00000399079 AHDC1Q5TGY3 1603 aaPredicted RBP20.28■□□□□ 0.84
HLA-DQB1-202ENST00000399079 HIRIP3Q9BW71 556 aaPredicted RBP20.27■□□□□ 0.84
HLA-DQB1-202ENST00000399079 ESCO1Q5FWF5 840 aa20.27■□□□□ 0.83
HLA-DQB1-202ENST00000399079 KIAA1210Q9ULL0 1709 aa20.26■□□□□ 0.83
HLA-DQB1-202ENST00000399079 MINK1Q8N4C8 1332 aaPredicted RBP20.26■□□□□ 0.83
HLA-DQB1-202ENST00000399079 MED1Q15648 1581 aaPredicted RBP20.26■□□□□ 0.83
HLA-DQB1-202ENST00000399079 TONSLQ96HA7 1378 aa20.24■□□□□ 0.83
HLA-DQB1-202ENST00000399079 JCADQ9P266 1359 aa20.23■□□□□ 0.83
HLA-DQB1-202ENST00000399079 NBPF8Q3BBV2 869 aa20.23■□□□□ 0.83
HLA-DQB1-202ENST00000399079 NHSL1Q5SYE7 1610 aa20.23■□□□□ 0.83
HLA-DQB1-202ENST00000399079 ARHGEF28Q8N1W1 1705 aaKnown RBP20.23■□□□□ 0.83
HLA-DQB1-202ENST00000399079 FMN2Q9NZ56 1722 aa20.23■□□□□ 0.83
HLA-DQB1-202ENST00000399079 FOXO3O43524 673 aa20.2■□□□□ 0.82
HLA-DQB1-202ENST00000399079 TRPM1Q7Z4N2 1603 aa20.19■□□□□ 0.82
HLA-DQB1-202ENST00000399079 LRRC59Q96AG4 307 aaKnown RBP20.19■□□□□ 0.82
HLA-DQB1-202ENST00000399079 ADGRB2O60241 1585 aa20.18■□□□□ 0.82
HLA-DQB1-202ENST00000399079 XPCQ01831 940 aaPredicted RBP20.18■□□□□ 0.82
HLA-DQB1-202ENST00000399079 ROCK2O75116 1388 aaKnown RBP20.18■□□□□ 0.82
HLA-DQB1-202ENST00000399079 SOS2Q07890 1332 aaPredicted RBP20.18■□□□□ 0.82
HLA-DQB1-202ENST00000399079 WASLO00401 505 aaPredicted RBP20.17■□□□□ 0.82
HLA-DQB1-202ENST00000399079 NPHP3Q7Z494 1330 aa20.16■□□□□ 0.82
HLA-DQB1-202ENST00000399079 RGPD8O14715 1765 aaPredicted RBP20.16■□□□□ 0.82
HLA-DQB1-202ENST00000399079 PHF8Q9UPP1 1060 aa20.15■□□□□ 0.82
HLA-DQB1-202ENST00000399079 PRR36Q9H6K5 1346 aa20.15■□□□□ 0.82
HLA-DQB1-202ENST00000399079 ILDR2Q71H61 639 aa20.14■□□□□ 0.81
HLA-DQB1-202ENST00000399079 USP32Q8NFA0 1604 aa20.14■□□□□ 0.81
HLA-DQB1-202ENST00000399079 SPATA31A6Q5VVP1 1343 aa20.14■□□□□ 0.81
HLA-DQB1-202ENST00000399079 CENPJQ9HC77 1338 aaPredicted RBP20.14■□□□□ 0.81
HLA-DQB1-202ENST00000399079 PMFBP1Q8TBY8 1022 aa20.13■□□□□ 0.81
HLA-DQB1-202ENST00000399079 SHPRHQ149N8 1683 aa20.13■□□□□ 0.81
HLA-DQB1-202ENST00000399079 LRP6O75581 1613 aa20.13■□□□□ 0.81
HLA-DQB1-202ENST00000399079 PNPLA6Q8IY17 1366 aa20.13■□□□□ 0.81
HLA-DQB1-202ENST00000399079 NUTM2BA6NNL0 878 aaPredicted RBP20.12■□□□□ 0.81
HLA-DQB1-202ENST00000399079 NUTM2EB1AL46 878 aaPredicted RBP20.12■□□□□ 0.81
HLA-DQB1-202ENST00000399079 NUTM2AQ8IVF1 878 aaPredicted RBP20.12■□□□□ 0.81
HLA-DQB1-202ENST00000399079 CDK19Q9BWU1 502 aa20.12■□□□□ 0.81
HLA-DQB1-202ENST00000399079 ANKARQ7Z5J8 1434 aa20.12■□□□□ 0.81
HLA-DQB1-202ENST00000399079 PXDNQ92626 1479 aa20.12■□□□□ 0.81
HLA-DQB1-202ENST00000399079 RGS17Q9UGC6 210 aaPredicted RBP20.11■□□□□ 0.81
HLA-DQB1-202ENST00000399079 TULP4Q9NRJ4 1543 aa20.1■□□□□ 0.81
HLA-DQB1-202ENST00000399079 GPRASP1Q5JY77 1395 aa20.09■□□□□ 0.81
HLA-DQB1-202ENST00000399079 KIF1AQ12756 1690 aa20.09■□□□□ 0.81
HLA-DQB1-202ENST00000399079 KRT28Q7Z3Y7 464 aa20.09■□□□□ 0.81
HLA-DQB1-202ENST00000399079 CCER1Q8TC90 406 aaPredicted RBP20.09■□□□□ 0.81
HLA-DQB1-202ENST00000399079 CARD11Q9BXL7 1154 aa20.09■□□□□ 0.81
HLA-DQB1-202ENST00000399079 CLSPNQ9HAW4 1339 aa20.09■□□□□ 0.81
HLA-DQB1-202ENST00000399079 EIF3AQ14152 1382 aaKnown RBP20.09■□□□□ 0.81
HLA-DQB1-202ENST00000399079 NUDT16Q96DE0 195 aaKnown RBP20.08■□□□□ 0.81
HLA-DQB1-202ENST00000399079 ATP7BP35670 1465 aa20.07■□□□□ 0.8
HLA-DQB1-202ENST00000399079 RALGAPBQ86X10 1494 aa20.07■□□□□ 0.8
HLA-DQB1-202ENST00000399079 MEX3CQ5U5Q3 659 aaKnown RBP20.07■□□□□ 0.8
HLA-DQB1-202ENST00000399079 QRICH2Q9H0J4 1663 aa20.06■□□□□ 0.8
HLA-DQB1-202ENST00000399079 PSME1Q06323 249 aa20.06■□□□□ 0.8
HLA-DQB1-202ENST00000399079 SRPK2P78362 688 aaKnown RBP20.05■□□□□ 0.8
HLA-DQB1-202ENST00000399079 CABP2Q9NPB3 220 aa20.05■□□□□ 0.8
HLA-DQB1-202ENST00000399079 SPATA31A3Q5VYP0 1347 aa20.04■□□□□ 0.8
HLA-DQB1-202ENST00000399079 NGDNQ8NEJ9 315 aaKnown RBP20.03■□□□□ 0.8
HLA-DQB1-202ENST00000399079 ADAMTS2O95450 1211 aa20.02■□□□□ 0.8
HLA-DQB1-202ENST00000399079 CCDC61Q9Y6R9 512 aa20.02■□□□□ 0.8
HLA-DQB1-202ENST00000399079 LMOD2Q6P5Q4 547 aa20.01■□□□□ 0.79
HLA-DQB1-202ENST00000399079 POTEAQ6S8J7 498 aa20.01■□□□□ 0.79
HLA-DQB1-202ENST00000399079 PLEKHG5O94827 1062 aa20■□□□□ 0.79
HLA-DQB1-202ENST00000399079 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
HLA-DQB1-202ENST00000399079 EVC2Q86UK5 1308 aa19.99■□□□□ 0.79
HLA-DQB1-202ENST00000399079 C8orf37Q96NL8 207 aa19.99■□□□□ 0.79
HLA-DQB1-202ENST00000399079 TNS3Q68CZ2 1445 aa19.99■□□□□ 0.79
HLA-DQB1-202ENST00000399079 COL22A1Q8NFW1 1626 aaPredicted RBP19.99■□□□□ 0.79
HLA-DQB1-202ENST00000399079 ITSN1Q15811 1721 aa19.98■□□□□ 0.79
HLA-DQB1-202ENST00000399079 SBNO1A3KN83 1393 aa19.98■□□□□ 0.79
HLA-DQB1-202ENST00000399079 ACEP12821 1306 aa19.98■□□□□ 0.79
HLA-DQB1-202ENST00000399079 PLEKHG3A1L390 1219 aa19.97■□□□□ 0.79
HLA-DQB1-202ENST00000399079 CABLES1Q8TDN4 633 aa19.97■□□□□ 0.79
HLA-DQB1-202ENST00000399079 TOPAZ1Q8N9V7 1692 aa19.96■□□□□ 0.79
HLA-DQB1-202ENST00000399079 PPIP5K1Q6PFW1 1433 aa19.96■□□□□ 0.79
HLA-DQB1-202ENST00000399079 PAK3O75914 559 aaPredicted RBP19.96■□□□□ 0.79
HLA-DQB1-202ENST00000399079 AFF2P51816 1311 aa19.95■□□□□ 0.78
HLA-DQB1-202ENST00000399079 CABP1Q9NZU7 370 aa19.95■□□□□ 0.78
HLA-DQB1-202ENST00000399079 POLR3AO14802 1390 aaPredicted RBP19.95■□□□□ 0.78
HLA-DQB1-202ENST00000399079 TRPM3Q9HCF6 1732 aaPredicted RBP19.94■□□□□ 0.78
HLA-DQB1-202ENST00000399079 NGLY1Q96IV0 654 aa19.94■□□□□ 0.78
HLA-DQB1-202ENST00000399079 SBNO2Q9Y2G9 1366 aa19.93■□□□□ 0.78
HLA-DQB1-202ENST00000399079 ST20-MTHFSA0A0A6YYL1 179 aa19.93■□□□□ 0.78
HLA-DQB1-202ENST00000399079 ARHGEF10O15013 1369 aa19.92■□□□□ 0.78
HLA-DQB1-202ENST00000399079 ZNF772Q68DY9 489 aaPredicted RBP19.92■□□□□ 0.78
HLA-DQB1-202ENST00000399079 HAP1P54257 671 aaPredicted RBP19.9■□□□□ 0.78
HLA-DQB1-202ENST00000399079 TESK2Q96S53 571 aa19.9■□□□□ 0.78
HLA-DQB1-202ENST00000399079 ALS2Q96Q42 1657 aa19.89■□□□□ 0.78
HLA-DQB1-202ENST00000399079 USP47Q96K76 1375 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms