RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 CDC42BPGQ6DT37 1551 aa36.91■■■■□ 3.5
U2AF1-203ENST00000398137 SIN3AQ96ST3 1273 aa36.91■■■■□ 3.5
U2AF1-203ENST00000398137 STK26Q9P289 416 aa36.91■■■■□ 3.5
U2AF1-203ENST00000398137 WAPLQ7Z5K2 1190 aa36.9■■■■□ 3.5
U2AF1-203ENST00000398137 PLEKHH1Q9ULM0 1364 aa36.9■■■■□ 3.5
U2AF1-203ENST00000398137 ORAI2Q96SN7 254 aa36.89■■■■□ 3.5
U2AF1-203ENST00000398137 C14orf93Q9H972 538 aaKnown RBP36.89■■■■□ 3.5
U2AF1-203ENST00000398137 YTHDC2Q9H6S0 1430 aaKnown RBP36.88■■■■□ 3.49
U2AF1-203ENST00000398137 CFAP70Q5T0N1 1121 aa36.85■■■■□ 3.49
U2AF1-203ENST00000398137 NEUROD1Q13562 356 aa36.84■■■■□ 3.49
U2AF1-203ENST00000398137 CCER1Q8TC90 406 aaPredicted RBP36.82■■■■□ 3.48
U2AF1-203ENST00000398137 LRRC59Q96AG4 307 aaKnown RBP36.81■■■■□ 3.48
U2AF1-203ENST00000398137 PNPLA6Q8IY17 1366 aa36.8■■■■□ 3.48
U2AF1-203ENST00000398137 SOS2Q07890 1332 aaPredicted RBP36.78■■■■□ 3.48
U2AF1-203ENST00000398137 NUTM2BA6NNL0 878 aaPredicted RBP36.76■■■■□ 3.48
U2AF1-203ENST00000398137 NUTM2EB1AL46 878 aaPredicted RBP36.76■■■■□ 3.48
U2AF1-203ENST00000398137 NUTM2AQ8IVF1 878 aaPredicted RBP36.76■■■■□ 3.48
U2AF1-203ENST00000398137 SIRT1Q96EB6 747 aa36.75■■■■□ 3.47
U2AF1-203ENST00000398137 FMN2Q9NZ56 1722 aa36.75■■■■□ 3.47
U2AF1-203ENST00000398137 ADGRB1O14514 1584 aa36.74■■■■□ 3.47
U2AF1-203ENST00000398137 MEX3CQ5U5Q3 659 aaKnown RBP36.73■■■■□ 3.47
U2AF1-203ENST00000398137 CLSPNQ9HAW4 1339 aa36.73■■■■□ 3.47
U2AF1-203ENST00000398137 ESCO1Q5FWF5 840 aa36.69■■■■□ 3.46
U2AF1-203ENST00000398137 DCAF11Q8TEB1 546 aa36.69■■■■□ 3.46
U2AF1-203ENST00000398137 PXDNQ92626 1479 aa36.69■■■■□ 3.46
U2AF1-203ENST00000398137 NUTM2FA1L443 756 aa36.68■■■■□ 3.46
U2AF1-203ENST00000398137 KDM2AQ9Y2K7 1162 aa36.67■■■■□ 3.46
U2AF1-203ENST00000398137 DLC1Q96QB1 1528 aa36.66■■■■□ 3.46
U2AF1-203ENST00000398137 RGPD8O14715 1765 aaPredicted RBP36.64■■■■□ 3.46
U2AF1-203ENST00000398137 L3MBTL2Q969R5 705 aa36.63■■■■□ 3.45
U2AF1-203ENST00000398137 TONSLQ96HA7 1378 aa36.63■■■■□ 3.45
U2AF1-203ENST00000398137 COL22A1Q8NFW1 1626 aaPredicted RBP36.63■■■■□ 3.45
U2AF1-203ENST00000398137 ZNF772Q68DY9 489 aaPredicted RBP36.62■■■■□ 3.45
U2AF1-203ENST00000398137 PRAM1Q96QH2 718 aa36.62■■■■□ 3.45
U2AF1-203ENST00000398137 NPHP3Q7Z494 1330 aa36.6■■■■□ 3.45
U2AF1-203ENST00000398137 FOXO3O43524 673 aa36.6■■■■□ 3.45
U2AF1-203ENST00000398137 AFF2P51816 1311 aa36.59■■■■□ 3.45
U2AF1-203ENST00000398137 XPCQ01831 940 aaPredicted RBP36.58■■■■□ 3.45
U2AF1-203ENST00000398137 SAFB2Q14151 953 aaKnown RBP eCLIP36.57■■■■□ 3.44
U2AF1-203ENST00000398137 KIF1AQ12756 1690 aa36.56■■■■□ 3.44
U2AF1-203ENST00000398137 STAC3Q96MF2 364 aa36.55■■■■□ 3.44
U2AF1-203ENST00000398137 ADGRB2O60241 1585 aa36.54■■■■□ 3.44
U2AF1-203ENST00000398137 C8orf37Q96NL8 207 aa36.54■■■■□ 3.44
U2AF1-203ENST00000398137 USP32Q8NFA0 1604 aa36.54■■■■□ 3.44
U2AF1-203ENST00000398137 TRAK1Q9UPV9 953 aa36.53■■■■□ 3.44
U2AF1-203ENST00000398137 ADAMTS2O95450 1211 aa36.51■■■■□ 3.44
U2AF1-203ENST00000398137 POGKQ9P215 609 aa36.48■■■■□ 3.43
U2AF1-203ENST00000398137 ARHGEF28Q8N1W1 1705 aaKnown RBP36.46■■■■□ 3.43
U2AF1-203ENST00000398137 RXRBP28702 533 aa36.44■■■■□ 3.42
U2AF1-203ENST00000398137 PHF8Q9UPP1 1060 aa36.43■■■■□ 3.42
U2AF1-203ENST00000398137 MARF1Q9Y4F3 1742 aaKnown RBP36.42■■■■□ 3.42
U2AF1-203ENST00000398137 SPATA31A3Q5VYP0 1347 aa36.42■■■■□ 3.42
U2AF1-203ENST00000398137 HIRIP3Q9BW71 556 aaPredicted RBP36.42■■■■□ 3.42
U2AF1-203ENST00000398137 NGLY1Q96IV0 654 aa36.41■■■■□ 3.42
U2AF1-203ENST00000398137 CDK12Q9NYV4 1490 aaPredicted RBP36.41■■■■□ 3.42
U2AF1-203ENST00000398137 ANKARQ7Z5J8 1434 aa36.41■■■■□ 3.42
U2AF1-203ENST00000398137 KRT28Q7Z3Y7 464 aa36.4■■■■□ 3.42
U2AF1-203ENST00000398137 KIAA1210Q9ULL0 1709 aa36.39■■■■□ 3.42
U2AF1-203ENST00000398137 MINK1Q8N4C8 1332 aaPredicted RBP36.39■■■■□ 3.42
U2AF1-203ENST00000398137 QTRT2Q9H974 415 aaKnown RBP36.39■■■■□ 3.42
U2AF1-203ENST00000398137 PRR36Q9H6K5 1346 aa36.37■■■■□ 3.41
U2AF1-203ENST00000398137 FNBP4Q8N3X1 1017 aaPredicted RBP36.37■■■■□ 3.41
U2AF1-203ENST00000398137 TIMELESSQ9UNS1 1208 aa36.35■■■■□ 3.41
U2AF1-203ENST00000398137 TULP4Q9NRJ4 1543 aa36.34■■■■□ 3.41
U2AF1-203ENST00000398137 NBPF8Q3BBV2 869 aa36.33■■■■□ 3.41
U2AF1-203ENST00000398137 TRPM1Q7Z4N2 1603 aa36.33■■■■□ 3.41
U2AF1-203ENST00000398137 RGS12O14924 1447 aa36.33■■■■□ 3.41
U2AF1-203ENST00000398137 TNS3Q68CZ2 1445 aa36.33■■■■□ 3.41
U2AF1-203ENST00000398137 PMFBP1Q8TBY8 1022 aa36.32■■■■□ 3.4
U2AF1-203ENST00000398137 WASLO00401 505 aaPredicted RBP36.31■■■■□ 3.4
U2AF1-203ENST00000398137 RBM6P78332 1123 aaKnown RBP36.31■■■■□ 3.4
U2AF1-203ENST00000398137 USP21Q9UK80 565 aa36.31■■■■□ 3.4
U2AF1-203ENST00000398137 NBPF1Q3BBV0 1214 aa36.3■■■■□ 3.4
U2AF1-203ENST00000398137 TRPM3Q9HCF6 1732 aaPredicted RBP36.3■■■■□ 3.4
U2AF1-203ENST00000398137 BCL9LQ86UU0 1499 aa36.3■■■■□ 3.4
U2AF1-203ENST00000398137 SBNO1A3KN83 1393 aa36.29■■■■□ 3.4
U2AF1-203ENST00000398137 ATRNO75882 1429 aa36.27■■■■□ 3.4
U2AF1-203ENST00000398137 ABCA3Q99758 1704 aa36.27■■■■□ 3.4
U2AF1-203ENST00000398137 PSME1Q06323 249 aa36.25■■■■□ 3.39
U2AF1-203ENST00000398137 ATP7BP35670 1465 aa36.24■■■■□ 3.39
U2AF1-203ENST00000398137 UPF1Q92900 1129 aaKnown RBP eCLIP36.23■■■■□ 3.39
U2AF1-203ENST00000398137 EIF3AQ14152 1382 aaKnown RBP36.23■■■■□ 3.39
U2AF1-203ENST00000398137 RALGAPBQ86X10 1494 aa36.23■■■■□ 3.39
U2AF1-203ENST00000398137 TRPC5Q9UL62 973 aaPredicted RBP36.22■■■■□ 3.39
U2AF1-203ENST00000398137 ROCK2O75116 1388 aaKnown RBP36.21■■■■□ 3.39
U2AF1-203ENST00000398137 CABLES1Q8TDN4 633 aa36.21■■■■□ 3.39
U2AF1-203ENST00000398137 ALS2Q96Q42 1657 aa36.21■■■■□ 3.39
U2AF1-203ENST00000398137 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.2■■■■□ 3.39
U2AF1-203ENST00000398137 SLIT2O94813 1529 aa36.2■■■■□ 3.39
U2AF1-203ENST00000398137 ITSN1Q15811 1721 aa36.17■■■■□ 3.38
U2AF1-203ENST00000398137 ARHGEF10O15013 1369 aa36.15■■■■□ 3.38
U2AF1-203ENST00000398137 TOPAZ1Q8N9V7 1692 aa36.15■■■■□ 3.38
U2AF1-203ENST00000398137 NUDT16Q96DE0 195 aaKnown RBP36.14■■■■□ 3.38
U2AF1-203ENST00000398137 CDK19Q9BWU1 502 aa36.13■■■■□ 3.37
U2AF1-203ENST00000398137 GPRASP1Q5JY77 1395 aa36.13■■■■□ 3.37
U2AF1-203ENST00000398137 LMOD2Q6P5Q4 547 aa36.12■■■■□ 3.37
U2AF1-203ENST00000398137 PLEKHG5O94827 1062 aa36.11■■■■□ 3.37
U2AF1-203ENST00000398137 CRYBG1Q9Y4K1 1723 aa36.11■■■■□ 3.37
U2AF1-203ENST00000398137 PLCH1Q4KWH8 1693 aa36.1■■■■□ 3.37
U2AF1-203ENST00000398137 GLI3P10071 1580 aa36.09■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms