RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 MYH16Q9H6N6 1097 aa6.93□□□□□ -1.3
PTPRD-205ENST00000397611 BRPF3Q9ULD4 1205 aa6.93□□□□□ -1.3
PTPRD-205ENST00000397611 ERVK-7P63135 1459 aa6.92□□□□□ -1.3
PTPRD-205ENST00000397611 SETBP1Q9Y6X0 1596 aa6.92□□□□□ -1.3
PTPRD-205ENST00000397611 VGFO15240 615 aaPredicted RBP6.92□□□□□ -1.3
PTPRD-205ENST00000397611 CLUAP1Q96AJ1 413 aa6.92□□□□□ -1.3
PTPRD-205ENST00000397611 ZNF518AQ6AHZ1 1483 aa6.92□□□□□ -1.3
PTPRD-205ENST00000397611 DEPDC5O75140 1603 aa6.92□□□□□ -1.3
PTPRD-205ENST00000397611 ASXL2Q76L83 1435 aa6.92□□□□□ -1.3
PTPRD-205ENST00000397611 CRBNQ96SW2 442 aa6.92□□□□□ -1.3
PTPRD-205ENST00000397611 ATP7AQ04656 1500 aa6.92□□□□□ -1.3
PTPRD-205ENST00000397611 EFCAB6Q5THR3 1501 aa6.91□□□□□ -1.3
PTPRD-205ENST00000397611 ESF1Q9H501 851 aaKnown RBP6.91□□□□□ -1.3
PTPRD-205ENST00000397611 RUNDC1Q96C34 613 aa6.91□□□□□ -1.3
PTPRD-205ENST00000397611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.91□□□□□ -1.3
PTPRD-205ENST00000397611 PPP6R1Q9UPN7 881 aa6.91□□□□□ -1.3
PTPRD-205ENST00000397611 ATAD2Q6PL18 1390 aa6.91□□□□□ -1.3
PTPRD-205ENST00000397611 A0A0U1RQG5 324 aaPredicted RBP6.91□□□□□ -1.3
PTPRD-205ENST00000397611 RWDD1Q9H446 243 aaPredicted RBP6.91□□□□□ -1.3
PTPRD-205ENST00000397611 AFAP1Q8N556 730 aa6.9□□□□□ -1.3
PTPRD-205ENST00000397611 MED14O60244 1454 aa6.9□□□□□ -1.3
PTPRD-205ENST00000397611 KIF16BQ96L93 1317 aa6.9□□□□□ -1.3
PTPRD-205ENST00000397611 CDC42BPBQ9Y5S2 1711 aa6.9□□□□□ -1.3
PTPRD-205ENST00000397611 INO80Q9ULG1 1556 aaPredicted RBP6.9□□□□□ -1.3
PTPRD-205ENST00000397611 KIF3BO15066 747 aa6.9□□□□□ -1.3
PTPRD-205ENST00000397611 NOS1P29475 1434 aa6.9□□□□□ -1.3
PTPRD-205ENST00000397611 MYO5CQ9NQX4 1742 aa6.9□□□□□ -1.3
PTPRD-205ENST00000397611 NEO1Q92859 1461 aa6.9□□□□□ -1.31
PTPRD-205ENST00000397611 HSP90AB1P08238 724 aaKnown RBP6.9□□□□□ -1.31
PTPRD-205ENST00000397611 IQGAP1P46940 1657 aa6.9□□□□□ -1.31
PTPRD-205ENST00000397611 APAF1O14727 1248 aa6.9□□□□□ -1.31
PTPRD-205ENST00000397611 BRPF1P55201 1214 aaPredicted RBP6.9□□□□□ -1.31
PTPRD-205ENST00000397611 ANKRD36BQ8N2N9 1353 aa6.89□□□□□ -1.31
PTPRD-205ENST00000397611 CC2D1BQ5T0F9 858 aaKnown RBP6.89□□□□□ -1.31
PTPRD-205ENST00000397611 PLCB2Q00722 1185 aa6.89□□□□□ -1.31
PTPRD-205ENST00000397611 C8orf34Q49A92 452 aa6.89□□□□□ -1.31
PTPRD-205ENST00000397611 EVC2Q86UK5 1308 aa6.89□□□□□ -1.31
PTPRD-205ENST00000397611 HSCBQ8IWL3 235 aa6.88□□□□□ -1.31
PTPRD-205ENST00000397611 WWC1Q8IX03 1113 aa6.88□□□□□ -1.31
PTPRD-205ENST00000397611 FRAT1Q92837 279 aaPredicted RBP6.88□□□□□ -1.31
PTPRD-205ENST00000397611 CIZ1Q9ULV3 898 aaPredicted RBP6.88□□□□□ -1.31
PTPRD-205ENST00000397611 CFAP70Q5T0N1 1121 aa6.88□□□□□ -1.31
PTPRD-205ENST00000397611 CALD1Q05682 793 aaKnown RBP6.88□□□□□ -1.31
PTPRD-205ENST00000397611 PODXL2Q9NZ53 605 aa6.88□□□□□ -1.31
PTPRD-205ENST00000397611 ABCA9Q8IUA7 1624 aa6.87□□□□□ -1.31
PTPRD-205ENST00000397611 ADGRB3O60242 1522 aa6.87□□□□□ -1.31
PTPRD-205ENST00000397611 IPO8O15397 1037 aaKnown RBP6.87□□□□□ -1.31
PTPRD-205ENST00000397611 HDAC1Q13547 482 aaPredicted RBP6.87□□□□□ -1.31
PTPRD-205ENST00000397611 MORC1Q86VD1 984 aa6.87□□□□□ -1.31
PTPRD-205ENST00000397611 ARHGAP45Q92619 1136 aa6.87□□□□□ -1.31
PTPRD-205ENST00000397611 NFKBIBQ15653 356 aa6.87□□□□□ -1.31
PTPRD-205ENST00000397611 SMC5Q8IY18 1101 aa6.87□□□□□ -1.31
PTPRD-205ENST00000397611 ADGRB1O14514 1584 aa6.87□□□□□ -1.31
PTPRD-205ENST00000397611 PTMSP20962 102 aa6.87□□□□□ -1.31
PTPRD-205ENST00000397611 RARSP54136 660 aaKnown RBP6.87□□□□□ -1.31
PTPRD-205ENST00000397611 TCP11L2Q8N4U5 519 aa6.87□□□□□ -1.31
PTPRD-205ENST00000397611 POGZQ7Z3K3 1410 aa6.87□□□□□ -1.31
PTPRD-205ENST00000397611 TERF2IPQ9NYB0 399 aa6.86□□□□□ -1.31
PTPRD-205ENST00000397611 ZKSCAN2Q63HK3 967 aa6.86□□□□□ -1.31
PTPRD-205ENST00000397611 DDX19BQ9UMR2 479 aa6.86□□□□□ -1.31
PTPRD-205ENST00000397611 SPHKAPQ2M3C7 1700 aa6.86□□□□□ -1.31
PTPRD-205ENST00000397611 NPATQ14207 1427 aa6.86□□□□□ -1.31
PTPRD-205ENST00000397611 PPIP5K1Q6PFW1 1433 aa6.86□□□□□ -1.31
PTPRD-205ENST00000397611 MYO3AQ8NEV4 1616 aa6.86□□□□□ -1.31
PTPRD-205ENST00000397611 MAP3K4Q9Y6R4 1608 aa6.86□□□□□ -1.31
PTPRD-205ENST00000397611 CARD14Q9BXL6 1004 aa6.85□□□□□ -1.31
PTPRD-205ENST00000397611 KLHL34Q8N239 644 aa6.85□□□□□ -1.31
PTPRD-205ENST00000397611 USP32Q8NFA0 1604 aa6.85□□□□□ -1.31
PTPRD-205ENST00000397611 ADGRF5Q8IZF2 1346 aa6.85□□□□□ -1.31
PTPRD-205ENST00000397611 NEUROD2Q15784 382 aa6.85□□□□□ -1.31
PTPRD-205ENST00000397611 ALDH1L2Q3SY69 923 aa6.85□□□□□ -1.31
PTPRD-205ENST00000397611 SIRT1Q96EB6 747 aa6.85□□□□□ -1.31
PTPRD-205ENST00000397611 ABCC3O15438 1527 aa6.85□□□□□ -1.31
PTPRD-205ENST00000397611 PNPLA6Q8IY17 1366 aa6.85□□□□□ -1.31
PTPRD-205ENST00000397611 TBC1D32Q96NH3 1257 aa6.84□□□□□ -1.31
PTPRD-205ENST00000397611 FTSJ3Q8IY81 847 aaKnown RBP6.84□□□□□ -1.32
PTPRD-205ENST00000397611 UBE2Q2Q8WVN8 375 aa6.84□□□□□ -1.32
PTPRD-205ENST00000397611 CHAF1AQ13111 956 aaPredicted RBP6.83□□□□□ -1.32
PTPRD-205ENST00000397611 MROH1Q8NDA8 1641 aa6.83□□□□□ -1.32
PTPRD-205ENST00000397611 NSD3Q9BZ95 1437 aa6.83□□□□□ -1.32
PTPRD-205ENST00000397611 C20orf194Q5TEA3 1177 aa6.83□□□□□ -1.32
PTPRD-205ENST00000397611 MVPQ14764 893 aaKnown RBP6.83□□□□□ -1.32
PTPRD-205ENST00000397611 DZIP1LQ8IYY4 767 aaKnown RBP6.83□□□□□ -1.32
PTPRD-205ENST00000397611 FCHSD2O94868 740 aa6.82□□□□□ -1.32
PTPRD-205ENST00000397611 IQSEC2Q5JU85 1478 aa6.82□□□□□ -1.32
PTPRD-205ENST00000397611 USP19O94966 1318 aa6.82□□□□□ -1.32
PTPRD-205ENST00000397611 PLIN1O60240 522 aa6.82□□□□□ -1.32
PTPRD-205ENST00000397611 REREQ9P2R6 1566 aa6.82□□□□□ -1.32
PTPRD-205ENST00000397611 PIK3R4Q99570 1358 aa6.82□□□□□ -1.32
PTPRD-205ENST00000397611 LMOD3Q0VAK6 560 aa6.82□□□□□ -1.32
PTPRD-205ENST00000397611 GBP4Q96PP9 640 aa6.82□□□□□ -1.32
PTPRD-205ENST00000397611 CHMP5Q9NZZ3 219 aa6.82□□□□□ -1.32
PTPRD-205ENST00000397611 KIF24Q5T7B8 1368 aa6.82□□□□□ -1.32
PTPRD-205ENST00000397611 CLTCL1P53675 1640 aa6.82□□□□□ -1.32
PTPRD-205ENST00000397611 KDM5AP29375 1690 aaKnown RBP6.82□□□□□ -1.32
PTPRD-205ENST00000397611 FOXD4L1Q9NU39 408 aa6.81□□□□□ -1.32
PTPRD-205ENST00000397611 FAM13BQ9NYF5 915 aa6.81□□□□□ -1.32
PTPRD-205ENST00000397611 FAM43AQ8N2R8 423 aa6.81□□□□□ -1.32
PTPRD-205ENST00000397611 SNX21Q969T3 373 aa6.81□□□□□ -1.32
PTPRD-205ENST00000397611 MFAP1P55081 439 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms