RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 DNAI2Q9GZS0 605 aa3.07□□□□□ -1.92
NEB-203ENST00000397345 ZNHIT6Q9NWK9 470 aaKnown RBP3.07□□□□□ -1.92
NEB-203ENST00000397345 STK24Q9Y6E0 443 aa3.07□□□□□ -1.92
NEB-203ENST00000397345 PLIN1O60240 522 aa3.07□□□□□ -1.92
NEB-203ENST00000397345 PSMA5P28066 241 aa3.07□□□□□ -1.92
NEB-203ENST00000397345 TEX35Q5T0J7 233 aa3.07□□□□□ -1.92
NEB-203ENST00000397345 ATL3Q6DD88 541 aa3.07□□□□□ -1.92
NEB-203ENST00000397345 NINLQ9Y2I6 1382 aa3.07□□□□□ -1.92
NEB-203ENST00000397345 TSR1Q2NL82 804 aaKnown RBP3.07□□□□□ -1.92
NEB-203ENST00000397345 RTF1Q92541 710 aaKnown RBP3.06□□□□□ -1.92
NEB-203ENST00000397345 XPCQ01831 940 aaPredicted RBP3.06□□□□□ -1.92
NEB-203ENST00000397345 PRR29P0C7W0 189 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 PRPF38AQ8NAV1 312 aaKnown RBP3.06□□□□□ -1.92
NEB-203ENST00000397345 SEMA3FQ13275 785 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 ZRSR2Q15696 482 aaKnown RBP3.06□□□□□ -1.92
NEB-203ENST00000397345 DIAPH3Q9NSV4 1193 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 CWC15Q9P013 229 aaKnown RBP3.06□□□□□ -1.92
NEB-203ENST00000397345 NDC80O14777 642 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 IPO7O95373 1038 aaKnown RBP3.06□□□□□ -1.92
NEB-203ENST00000397345 DDX11Q96FC9 970 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 FAM69CQ0P6D2 419 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 ANKRD20A12PQ8NF67 263 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 SKAP1Q86WV1 359 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 RGS22Q8NE09 1264 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 PSMD1Q99460 953 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 ZNF287Q9HBT7 754 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 POGKQ9P215 609 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 TMEM51Q9NW97 253 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 USP8P40818 1118 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 MMP14P50281 582 aa3.06□□□□□ -1.92
NEB-203ENST00000397345 NCAPD3P42695 1498 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 GOLGA2Q08379 1002 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 SENP3Q9H4L4 574 aaPredicted RBP3.05□□□□□ -1.92
NEB-203ENST00000397345 WDR63Q8IWG1 891 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 NEMFO60524 1076 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 NF2P35240 595 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 HSP90AB1P08238 724 aaKnown RBP3.05□□□□□ -1.92
NEB-203ENST00000397345 SMYD5Q6GMV2 418 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 SEC63Q9UGP8 760 aaKnown RBP3.05□□□□□ -1.92
NEB-203ENST00000397345 HSCBQ8IWL3 235 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 DMRT2Q9Y5R5 561 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 SF3B2Q13435 895 aaKnown RBP3.05□□□□□ -1.92
NEB-203ENST00000397345 SETQ01105 290 aaPredicted RBP3.05□□□□□ -1.92
NEB-203ENST00000397345 CEP164Q9UPV0 1460 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 ZKSCAN1P17029 563 aaPredicted RBP3.05□□□□□ -1.92
NEB-203ENST00000397345 XBP1P17861 261 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 PPP2R5BQ15173 497 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 SPC24Q8NBT2 197 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 HFM1A2PYH4 1435 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 DNAAF4Q8WXU2 420 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 CHMP3Q9Y3E7 222 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 PPP1R2P41236 205 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 JMYQ8N9B5 988 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 RNF214Q8ND24 703 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 GCC1Q96CN9 775 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 PNMA2Q9UL42 364 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.05□□□□□ -1.92
NEB-203ENST00000397345 PES1O00541 588 aaKnown RBP3.05□□□□□ -1.92
NEB-203ENST00000397345 ERC2O15083 957 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 E2F4Q16254 413 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 MFSD4BQ5TF39 518 aa3.05□□□□□ -1.92
NEB-203ENST00000397345 FAM177A1Q8N128 213 aaPredicted RBP3.05□□□□□ -1.92
NEB-203ENST00000397345 NAT10Q9H0A0 1025 aaKnown RBP3.05□□□□□ -1.92
NEB-203ENST00000397345 CENPHQ9H3R5 247 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 MBD3O95983 291 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 EID1Q9Y6B2 187 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 ZNF189O75820 626 aaPredicted RBP3.04□□□□□ -1.92
NEB-203ENST00000397345 GORABQ5T7V8 394 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 CPSF2Q9P2I0 782 aaKnown RBP3.04□□□□□ -1.92
NEB-203ENST00000397345 CARMIL2Q6F5E8 1435 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 C10orf67Q8IYJ2 551 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 ZMYM3Q14202 1370 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 CCDC66A2RUB6 948 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 XRCC6P12956 609 aaKnown RBP eCLIP3.04□□□□□ -1.92
NEB-203ENST00000397345 ERC1Q8IUD2 1116 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 ARMCX6Q7L4S7 300 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 DNAJC5Q9H3Z4 198 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 TRAK2O60296 914 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 CT47A1Q5JQC4 288 aaPredicted RBP3.04□□□□□ -1.92
NEB-203ENST00000397345 LMOD2Q6P5Q4 547 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 GON4LQ3T8J9 2241 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 ARL10Q8N8L6 244 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 TIGD1Q96MW7 591 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 DDX19BQ9UMR2 479 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 SLC20A2Q08357 652 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 API5Q9BZZ5 524 aaKnown RBP3.04□□□□□ -1.92
NEB-203ENST00000397345 KIF20AO95235 890 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 TERF1P54274 439 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 PDE6BP35913 854 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 IQCDQ96DY2 449 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 RABEP1Q15276 862 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 ZNF713Q8N859 430 aaPredicted RBP3.04□□□□□ -1.92
NEB-203ENST00000397345 CA8P35219 290 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 EXOC6Q8TAG9 804 aa3.04□□□□□ -1.92
NEB-203ENST00000397345 CCDC47Q96A33 483 aaKnown RBP3.04□□□□□ -1.92
NEB-203ENST00000397345 ZBED9Q6R2W3 1325 aa3.03□□□□□ -1.92
NEB-203ENST00000397345 MYO1BO43795 1136 aa3.03□□□□□ -1.92
NEB-203ENST00000397345 BMP15O95972 392 aa3.03□□□□□ -1.92
NEB-203ENST00000397345 KRT32Q14532 448 aa3.03□□□□□ -1.92
NEB-203ENST00000397345 PANK2Q9BZ23 570 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms