RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CDC42BPGQ6DT37 1551 aa21.07■□□□□ 0.96
SEC13-208ENST00000397109 PLEKHH1Q9ULM0 1364 aa21.06■□□□□ 0.96
SEC13-208ENST00000397109 DLC1Q96QB1 1528 aa21.05■□□□□ 0.96
SEC13-208ENST00000397109 ADGRB1O14514 1584 aa21.05■□□□□ 0.96
SEC13-208ENST00000397109 POGKQ9P215 609 aa21.05■□□□□ 0.96
SEC13-208ENST00000397109 PRAM1Q96QH2 718 aa21.04■□□□□ 0.96
SEC13-208ENST00000397109 LRRC59Q96AG4 307 aaKnown RBP21.03■□□□□ 0.96
SEC13-208ENST00000397109 ORAI2Q96SN7 254 aa21.03■□□□□ 0.96
SEC13-208ENST00000397109 TRAK1Q9UPV9 953 aa21.03■□□□□ 0.96
SEC13-208ENST00000397109 NHSL1Q5SYE7 1610 aa21.03■□□□□ 0.96
SEC13-208ENST00000397109 ILDR2Q71H61 639 aa21.02■□□□□ 0.96
SEC13-208ENST00000397109 SPATA31A6Q5VVP1 1343 aa21.02■□□□□ 0.96
SEC13-208ENST00000397109 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
SEC13-208ENST00000397109 SIN3AQ96ST3 1273 aa21.01■□□□□ 0.95
SEC13-208ENST00000397109 SAFB2Q14151 953 aaKnown RBP eCLIP20.99■□□□□ 0.95
SEC13-208ENST00000397109 DDX17Q92841 729 aaKnown RBP20.99■□□□□ 0.95
SEC13-208ENST00000397109 SHPRHQ149N8 1683 aa20.98■□□□□ 0.95
SEC13-208ENST00000397109 NEUROD1Q13562 356 aa20.98■□□□□ 0.95
SEC13-208ENST00000397109 L3MBTL2Q969R5 705 aa20.98■□□□□ 0.95
SEC13-208ENST00000397109 KIAA1210Q9ULL0 1709 aa20.98■□□□□ 0.95
SEC13-208ENST00000397109 NUTM2FA1L443 756 aa20.97■□□□□ 0.95
SEC13-208ENST00000397109 NPHP3Q7Z494 1330 aa20.97■□□□□ 0.95
SEC13-208ENST00000397109 FMN2Q9NZ56 1722 aa20.96■□□□□ 0.95
SEC13-208ENST00000397109 SOS2Q07890 1332 aaPredicted RBP20.96■□□□□ 0.95
SEC13-208ENST00000397109 FOXO3O43524 673 aa20.92■□□□□ 0.94
SEC13-208ENST00000397109 MEX3CQ5U5Q3 659 aaKnown RBP20.92■□□□□ 0.94
SEC13-208ENST00000397109 ADGRB2O60241 1585 aa20.92■□□□□ 0.94
SEC13-208ENST00000397109 EIF3AQ14152 1382 aaKnown RBP20.91■□□□□ 0.94
SEC13-208ENST00000397109 PNPLA6Q8IY17 1366 aa20.91■□□□□ 0.94
SEC13-208ENST00000397109 MINK1Q8N4C8 1332 aaPredicted RBP20.91■□□□□ 0.94
SEC13-208ENST00000397109 NBPF1Q3BBV0 1214 aa20.91■□□□□ 0.94
SEC13-208ENST00000397109 RGS17Q9UGC6 210 aaPredicted RBP20.91■□□□□ 0.94
SEC13-208ENST00000397109 ANKARQ7Z5J8 1434 aa20.9■□□□□ 0.94
SEC13-208ENST00000397109 NUTM2BA6NNL0 878 aaPredicted RBP20.89■□□□□ 0.94
SEC13-208ENST00000397109 NUTM2EB1AL46 878 aaPredicted RBP20.89■□□□□ 0.94
SEC13-208ENST00000397109 NUTM2AQ8IVF1 878 aaPredicted RBP20.89■□□□□ 0.94
SEC13-208ENST00000397109 HIRIP3Q9BW71 556 aaPredicted RBP20.89■□□□□ 0.94
SEC13-208ENST00000397109 ARHGEF28Q8N1W1 1705 aaKnown RBP20.89■□□□□ 0.93
SEC13-208ENST00000397109 KIF1AQ12756 1690 aa20.88■□□□□ 0.93
SEC13-208ENST00000397109 WASLO00401 505 aaPredicted RBP20.88■□□□□ 0.93
SEC13-208ENST00000397109 PHF8Q9UPP1 1060 aa20.88■□□□□ 0.93
SEC13-208ENST00000397109 LRP6O75581 1613 aa20.88■□□□□ 0.93
SEC13-208ENST00000397109 SOCS7O14512 581 aa20.87■□□□□ 0.93
SEC13-208ENST00000397109 PXDNQ92626 1479 aa20.86■□□□□ 0.93
SEC13-208ENST00000397109 RGPD8O14715 1765 aaPredicted RBP20.86■□□□□ 0.93
SEC13-208ENST00000397109 XPCQ01831 940 aaPredicted RBP20.84■□□□□ 0.93
SEC13-208ENST00000397109 PSME1Q06323 249 aa20.84■□□□□ 0.93
SEC13-208ENST00000397109 KRT28Q7Z3Y7 464 aa20.84■□□□□ 0.93
SEC13-208ENST00000397109 TULP4Q9NRJ4 1543 aa20.83■□□□□ 0.92
SEC13-208ENST00000397109 TONSLQ96HA7 1378 aa20.82■□□□□ 0.92
SEC13-208ENST00000397109 ZNF772Q68DY9 489 aaPredicted RBP20.82■□□□□ 0.92
SEC13-208ENST00000397109 POTEAQ6S8J7 498 aa20.81■□□□□ 0.92
SEC13-208ENST00000397109 CENPJQ9HC77 1338 aaPredicted RBP20.81■□□□□ 0.92
SEC13-208ENST00000397109 SPATA31A3Q5VYP0 1347 aa20.8■□□□□ 0.92
SEC13-208ENST00000397109 TRPM1Q7Z4N2 1603 aa20.8■□□□□ 0.92
SEC13-208ENST00000397109 USP32Q8NFA0 1604 aa20.8■□□□□ 0.92
SEC13-208ENST00000397109 ROCK2O75116 1388 aaKnown RBP20.8■□□□□ 0.92
SEC13-208ENST00000397109 PMFBP1Q8TBY8 1022 aa20.8■□□□□ 0.92
SEC13-208ENST00000397109 CDK19Q9BWU1 502 aa20.8■□□□□ 0.92
SEC13-208ENST00000397109 PRR36Q9H6K5 1346 aa20.79■□□□□ 0.92
SEC13-208ENST00000397109 COL22A1Q8NFW1 1626 aaPredicted RBP20.79■□□□□ 0.92
SEC13-208ENST00000397109 NUDT16Q96DE0 195 aaKnown RBP20.78■□□□□ 0.92
SEC13-208ENST00000397109 SBNO1A3KN83 1393 aa20.78■□□□□ 0.92
SEC13-208ENST00000397109 NBPF8Q3BBV2 869 aa20.77■□□□□ 0.92
SEC13-208ENST00000397109 C8orf37Q96NL8 207 aa20.77■□□□□ 0.92
SEC13-208ENST00000397109 ADAMTS2O95450 1211 aa20.76■□□□□ 0.91
SEC13-208ENST00000397109 GPRASP1Q5JY77 1395 aa20.76■□□□□ 0.91
SEC13-208ENST00000397109 NGDNQ8NEJ9 315 aaKnown RBP20.75■□□□□ 0.91
SEC13-208ENST00000397109 AFF2P51816 1311 aa20.75■□□□□ 0.91
SEC13-208ENST00000397109 TNS3Q68CZ2 1445 aa20.75■□□□□ 0.91
SEC13-208ENST00000397109 NGLY1Q96IV0 654 aa20.75■□□□□ 0.91
SEC13-208ENST00000397109 CCDC61Q9Y6R9 512 aa20.74■□□□□ 0.91
SEC13-208ENST00000397109 ATP7BP35670 1465 aa20.73■□□□□ 0.91
SEC13-208ENST00000397109 ITSN1Q15811 1721 aa20.73■□□□□ 0.91
SEC13-208ENST00000397109 ARHGEF10O15013 1369 aa20.73■□□□□ 0.91
SEC13-208ENST00000397109 ZEB1P37275 1124 aaPredicted RBP20.72■□□□□ 0.91
SEC13-208ENST00000397109 CLSPNQ9HAW4 1339 aa20.72■□□□□ 0.91
SEC13-208ENST00000397109 SRPK2P78362 688 aaKnown RBP20.71■□□□□ 0.91
SEC13-208ENST00000397109 LMOD2Q6P5Q4 547 aa20.71■□□□□ 0.91
SEC13-208ENST00000397109 QRICH2Q9H0J4 1663 aa20.71■□□□□ 0.91
SEC13-208ENST00000397109 CARD11Q9BXL7 1154 aa20.7■□□□□ 0.9
SEC13-208ENST00000397109 PLEKHG3A1L390 1219 aa20.69■□□□□ 0.9
SEC13-208ENST00000397109 EVC2Q86UK5 1308 aa20.69■□□□□ 0.9
SEC13-208ENST00000397109 RXRBP28702 533 aa20.69■□□□□ 0.9
SEC13-208ENST00000397109 HAP1P54257 671 aaPredicted RBP20.69■□□□□ 0.9
SEC13-208ENST00000397109 FNBP4Q8N3X1 1017 aaPredicted RBP20.69■□□□□ 0.9
SEC13-208ENST00000397109 RALGAPBQ86X10 1494 aa20.68■□□□□ 0.9
SEC13-208ENST00000397109 QTRT2Q9H974 415 aaKnown RBP20.67■□□□□ 0.9
SEC13-208ENST00000397109 CABP2Q9NPB3 220 aa20.67■□□□□ 0.9
SEC13-208ENST00000397109 POLR3AO14802 1390 aaPredicted RBP20.66■□□□□ 0.9
SEC13-208ENST00000397109 USP21Q9UK80 565 aa20.66■□□□□ 0.9
SEC13-208ENST00000397109 TRPM3Q9HCF6 1732 aaPredicted RBP20.66■□□□□ 0.9
SEC13-208ENST00000397109 ACEP12821 1306 aa20.65■□□□□ 0.9
SEC13-208ENST00000397109 PAK3O75914 559 aaPredicted RBP20.65■□□□□ 0.9
SEC13-208ENST00000397109 TIMELESSQ9UNS1 1208 aa20.65■□□□□ 0.9
SEC13-208ENST00000397109 MARF1Q9Y4F3 1742 aaKnown RBP20.65■□□□□ 0.9
SEC13-208ENST00000397109 TOPAZ1Q8N9V7 1692 aa20.65■□□□□ 0.9
SEC13-208ENST00000397109 RBM6P78332 1123 aaKnown RBP20.63■□□□□ 0.89
SEC13-208ENST00000397109 CABLES1Q8TDN4 633 aa20.63■□□□□ 0.89
SEC13-208ENST00000397109 TRPC5Q9UL62 973 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms