RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 EXOSC9Q06265 439 aaKnown RBP18.55■□□□□ 0.56
RAPGEF4-201ENST00000397081 CARD14Q9BXL6 1004 aa18.55■□□□□ 0.56
RAPGEF4-201ENST00000397081 TRAK2O60296 914 aa18.54■□□□□ 0.56
RAPGEF4-201ENST00000397081 ARHGEF12Q9NZN5 1544 aa18.54■□□□□ 0.56
RAPGEF4-201ENST00000397081 PREX2Q70Z35 1606 aa18.54■□□□□ 0.56
RAPGEF4-201ENST00000397081 ADGRF5Q8IZF2 1346 aa18.54■□□□□ 0.56
RAPGEF4-201ENST00000397081 MYO5CQ9NQX4 1742 aa18.54■□□□□ 0.56
RAPGEF4-201ENST00000397081 CABP2Q9NPB3 220 aa18.54■□□□□ 0.56
RAPGEF4-201ENST00000397081 SHANK2Q9UPX8 1470 aa18.54■□□□□ 0.56
RAPGEF4-201ENST00000397081 FAM43AQ8N2R8 423 aa18.54■□□□□ 0.56
RAPGEF4-201ENST00000397081 C1orf115Q9H7X2 142 aa18.54■□□□□ 0.56
RAPGEF4-201ENST00000397081 ANKRD45Q5TZF3 282 aa18.53■□□□□ 0.56
RAPGEF4-201ENST00000397081 COL17A1Q9UMD9 1497 aaPredicted RBP18.53■□□□□ 0.56
RAPGEF4-201ENST00000397081 CDC42BPBQ9Y5S2 1711 aa18.53■□□□□ 0.56
RAPGEF4-201ENST00000397081 BLMP54132 1417 aaPredicted RBP18.52■□□□□ 0.55
RAPGEF4-201ENST00000397081 FOXD4L5Q5VV16 416 aaPredicted RBP18.51■□□□□ 0.55
RAPGEF4-201ENST00000397081 FOXD4L4Q8WXT5 416 aaPredicted RBP18.51■□□□□ 0.55
RAPGEF4-201ENST00000397081 MCM4P33991 863 aa18.51■□□□□ 0.55
RAPGEF4-201ENST00000397081 GLIPR1L2Q4G1C9 344 aa18.51■□□□□ 0.55
RAPGEF4-201ENST00000397081 CHMP5Q9NZZ3 219 aa18.51■□□□□ 0.55
RAPGEF4-201ENST00000397081 ADGBQ8N7X0 1667 aa18.5■□□□□ 0.55
RAPGEF4-201ENST00000397081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.5■□□□□ 0.55
RAPGEF4-201ENST00000397081 MAGI2Q86UL8 1455 aa18.5■□□□□ 0.55
RAPGEF4-201ENST00000397081 RRAGDQ9NQL2 400 aaPredicted RBP18.49■□□□□ 0.55
RAPGEF4-201ENST00000397081 SOX12O15370 315 aa18.48■□□□□ 0.55
RAPGEF4-201ENST00000397081 ZMYM4Q5VZL5 1548 aa18.48■□□□□ 0.55
RAPGEF4-201ENST00000397081 RIPK4P57078 832 aa18.48■□□□□ 0.55
RAPGEF4-201ENST00000397081 NOB1Q9ULX3 412 aaKnown RBP18.47■□□□□ 0.55
RAPGEF4-201ENST00000397081 GOLGA6L22H0YM25 854 aa18.46■□□□□ 0.55
RAPGEF4-201ENST00000397081 MVPQ14764 893 aaKnown RBP18.46■□□□□ 0.55
RAPGEF4-201ENST00000397081 VSIG10Q8N0Z9 540 aa18.46■□□□□ 0.55
RAPGEF4-201ENST00000397081 MINK1Q8N4C8 1332 aaPredicted RBP18.46■□□□□ 0.55
RAPGEF4-201ENST00000397081 TBC1D32Q96NH3 1257 aa18.46■□□□□ 0.55
RAPGEF4-201ENST00000397081 XRCC6P12956 609 aaKnown RBP eCLIP18.46■□□□□ 0.54
RAPGEF4-201ENST00000397081 ARHGEF5Q12774 1597 aa18.46■□□□□ 0.54
RAPGEF4-201ENST00000397081 NSD3Q9BZ95 1437 aa18.45■□□□□ 0.54
RAPGEF4-201ENST00000397081 HMOX1P09601 288 aa18.44■□□□□ 0.54
RAPGEF4-201ENST00000397081 ZNF521Q96K83 1311 aa18.44■□□□□ 0.54
RAPGEF4-201ENST00000397081 FBLN1P23142 703 aa18.43■□□□□ 0.54
RAPGEF4-201ENST00000397081 SSH1Q8WYL5 1049 aa18.43■□□□□ 0.54
RAPGEF4-201ENST00000397081 GBP4Q96PP9 640 aa18.43■□□□□ 0.54
RAPGEF4-201ENST00000397081 FOXD4L6Q3SYB3 417 aaPredicted RBP18.43■□□□□ 0.54
RAPGEF4-201ENST00000397081 FOXD4L3Q6VB84 417 aaPredicted RBP18.43■□□□□ 0.54
RAPGEF4-201ENST00000397081 NOL8Q76FK4 1167 aaKnown RBP18.43■□□□□ 0.54
RAPGEF4-201ENST00000397081 DUOX2Q9NRD8 1548 aa18.43■□□□□ 0.54
RAPGEF4-201ENST00000397081 TMEM57Q8N5G2 664 aa18.42■□□□□ 0.54
RAPGEF4-201ENST00000397081 THUMPD2Q9BTF0 503 aaKnown RBP18.42■□□□□ 0.54
RAPGEF4-201ENST00000397081 DDX19BQ9UMR2 479 aa18.42■□□□□ 0.54
RAPGEF4-201ENST00000397081 IPO8O15397 1037 aaKnown RBP18.42■□□□□ 0.54
RAPGEF4-201ENST00000397081 HSP90AA2PQ14568 343 aaPredicted RBP18.42■□□□□ 0.54
RAPGEF4-201ENST00000397081 USP19O94966 1318 aa18.41■□□□□ 0.54
RAPGEF4-201ENST00000397081 PLA2R1Q13018 1463 aa18.41■□□□□ 0.54
RAPGEF4-201ENST00000397081 TRIM27P14373 513 aa18.4■□□□□ 0.54
RAPGEF4-201ENST00000397081 DDX49Q9Y6V7 483 aaKnown RBP18.4■□□□□ 0.54
RAPGEF4-201ENST00000397081 ABCC1P33527 1531 aa18.4■□□□□ 0.54
RAPGEF4-201ENST00000397081 CROCC2H7BZ55 1655 aa18.4■□□□□ 0.54
RAPGEF4-201ENST00000397081 GPRASP1Q5JY77 1395 aa18.39■□□□□ 0.53
RAPGEF4-201ENST00000397081 DDX11L8A8MPP1 907 aa18.39■□□□□ 0.53
RAPGEF4-201ENST00000397081 ASXL1Q8IXJ9 1541 aa18.38■□□□□ 0.53
RAPGEF4-201ENST00000397081 SCAF11Q99590 1463 aaKnown RBP18.38■□□□□ 0.53
RAPGEF4-201ENST00000397081 ATF7IPQ6VMQ6 1270 aa18.37■□□□□ 0.53
RAPGEF4-201ENST00000397081 GRPEL1Q9HAV7 217 aa18.37■□□□□ 0.53
RAPGEF4-201ENST00000397081 WDR63Q8IWG1 891 aa18.36■□□□□ 0.53
RAPGEF4-201ENST00000397081 NGEFQ8N5V2 710 aa18.36■□□□□ 0.53
RAPGEF4-201ENST00000397081 PLEKHG5O94827 1062 aa18.36■□□□□ 0.53
RAPGEF4-201ENST00000397081 MRE11P49959 708 aa18.36■□□□□ 0.53
RAPGEF4-201ENST00000397081 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
RAPGEF4-201ENST00000397081 ATP7AQ04656 1500 aa18.35■□□□□ 0.53
RAPGEF4-201ENST00000397081 ZNF518AQ6AHZ1 1483 aa18.35■□□□□ 0.53
RAPGEF4-201ENST00000397081 MSNP26038 577 aaKnown RBP18.35■□□□□ 0.53
RAPGEF4-201ENST00000397081 KDM5DQ9BY66 1539 aa18.35■□□□□ 0.53
RAPGEF4-201ENST00000397081 TRMT2AQ8IZ69 625 aaKnown RBP18.34■□□□□ 0.53
RAPGEF4-201ENST00000397081 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
RAPGEF4-201ENST00000397081 NUTM2FA1L443 756 aa18.33■□□□□ 0.52
RAPGEF4-201ENST00000397081 TMPOP42166 694 aaKnown RBP18.33■□□□□ 0.52
RAPGEF4-201ENST00000397081 PLCB2Q00722 1185 aa18.33■□□□□ 0.52
RAPGEF4-201ENST00000397081 DIAPH1O60610 1272 aaKnown RBP18.32■□□□□ 0.52
RAPGEF4-201ENST00000397081 MCTP1Q6DN14 999 aa18.32■□□□□ 0.52
RAPGEF4-201ENST00000397081 CFAP65Q6ZU64 1925 aaKnown RBP18.32■□□□□ 0.52
RAPGEF4-201ENST00000397081 POLR1AO95602 1720 aaPredicted RBP18.32■□□□□ 0.52
RAPGEF4-201ENST00000397081 PTMAP06454 111 aaKnown RBP18.32■□□□□ 0.52
RAPGEF4-201ENST00000397081 TNPO1Q92973 898 aaKnown RBP18.32■□□□□ 0.52
RAPGEF4-201ENST00000397081 PRKAR2BP31323 418 aa18.31■□□□□ 0.52
RAPGEF4-201ENST00000397081 ESPNB1AK53 854 aa18.3■□□□□ 0.52
RAPGEF4-201ENST00000397081 RTEL1-TNFRSF6BF6WH68 1400 aa18.3■□□□□ 0.52
RAPGEF4-201ENST00000397081 PIK3C2GO75747 1445 aa18.3■□□□□ 0.52
RAPGEF4-201ENST00000397081 MPNDQ8N594 471 aa18.3■□□□□ 0.52
RAPGEF4-201ENST00000397081 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
RAPGEF4-201ENST00000397081 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
RAPGEF4-201ENST00000397081 CHD1LQ86WJ1 897 aa18.29■□□□□ 0.52
RAPGEF4-201ENST00000397081 DNTTIP2Q5QJE6 756 aaKnown RBP18.29■□□□□ 0.52
RAPGEF4-201ENST00000397081 HDGFL2Q7Z4V5 671 aaPredicted RBP18.29■□□□□ 0.52
RAPGEF4-201ENST00000397081 TERF2IPQ9NYB0 399 aa18.28■□□□□ 0.52
RAPGEF4-201ENST00000397081 SSFA2P28290 1259 aa18.28■□□□□ 0.52
RAPGEF4-201ENST00000397081 FBXO31Q5XUX0 539 aaPredicted RBP18.28■□□□□ 0.52
RAPGEF4-201ENST00000397081 CAVIN1Q6NZI2 390 aaKnown RBP18.28■□□□□ 0.52
RAPGEF4-201ENST00000397081 ANTXR1Q9H6X2 564 aa18.27■□□□□ 0.52
RAPGEF4-201ENST00000397081 ZFYVE16Q7Z3T8 1539 aa18.27■□□□□ 0.51
RAPGEF4-201ENST00000397081 UBE2Q2Q8WVN8 375 aa18.27■□□□□ 0.51
RAPGEF4-201ENST00000397081 RBM10P98175 930 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms