RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 BCAR3O75815 825 aa19.55■□□□□ 0.72
MCF2L-205ENST00000397017 CSB-PGBD3P0DP91 1061 aa19.55■□□□□ 0.72
MCF2L-205ENST00000397017 E9PSI1 815 aa19.55■□□□□ 0.72
MCF2L-205ENST00000397017 EMILIN1Q9Y6C2 1016 aa19.54■□□□□ 0.72
MCF2L-205ENST00000397017 NECTIN2Q92692 538 aa19.53■□□□□ 0.72
MCF2L-205ENST00000397017 ABTB2Q8N961 1025 aa19.53■□□□□ 0.72
MCF2L-205ENST00000397017 THUMPD2Q9BTF0 503 aaKnown RBP19.53■□□□□ 0.72
MCF2L-205ENST00000397017 PANK1Q8TE04 598 aa19.53■□□□□ 0.72
MCF2L-205ENST00000397017 RTL5Q5HYW3 569 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-205ENST00000397017 TNRQ92752 1358 aa19.52■□□□□ 0.72
MCF2L-205ENST00000397017 ANKLE2Q86XL3 938 aa19.52■□□□□ 0.72
MCF2L-205ENST00000397017 PROSER2Q86WR7 435 aaPredicted RBP19.51■□□□□ 0.71
MCF2L-205ENST00000397017 WASLO00401 505 aaPredicted RBP19.51■□□□□ 0.71
MCF2L-205ENST00000397017 ZFYVE16Q7Z3T8 1539 aa19.5■□□□□ 0.71
MCF2L-205ENST00000397017 SKAP1Q86WV1 359 aa19.5■□□□□ 0.71
MCF2L-205ENST00000397017 NEO1Q92859 1461 aa19.48■□□□□ 0.71
MCF2L-205ENST00000397017 SHROOM2Q13796 1616 aa19.48■□□□□ 0.71
MCF2L-205ENST00000397017 SULT6B1Q6IMI4 303 aa19.47■□□□□ 0.71
MCF2L-205ENST00000397017 C20orf194Q5TEA3 1177 aa19.47■□□□□ 0.71
MCF2L-205ENST00000397017 RIMS2Q9UQ26 1411 aa19.47■□□□□ 0.71
MCF2L-205ENST00000397017 ATAD2Q6PL18 1390 aa19.46■□□□□ 0.71
MCF2L-205ENST00000397017 FYB1O15117 783 aa19.46■□□□□ 0.71
MCF2L-205ENST00000397017 SLC4A10Q6U841 1118 aa19.46■□□□□ 0.71
MCF2L-205ENST00000397017 PRDM15P57071 1507 aaPredicted RBP19.45■□□□□ 0.7
MCF2L-205ENST00000397017 EXOSC9Q06265 439 aaKnown RBP19.44■□□□□ 0.7
MCF2L-205ENST00000397017 DCTN1Q14203 1278 aa19.44■□□□□ 0.7
MCF2L-205ENST00000397017 PPP6R1Q9UPN7 881 aa19.44■□□□□ 0.7
MCF2L-205ENST00000397017 FOXO3O43524 673 aa19.44■□□□□ 0.7
MCF2L-205ENST00000397017 ERICH6BQ5W0A0 696 aa19.44■□□□□ 0.7
MCF2L-205ENST00000397017 LTKP29376 864 aa19.43■□□□□ 0.7
MCF2L-205ENST00000397017 WWC1Q8IX03 1113 aa19.43■□□□□ 0.7
MCF2L-205ENST00000397017 UPF2Q9HAU5 1272 aaKnown RBP19.43■□□□□ 0.7
MCF2L-205ENST00000397017 PARD3Q8TEW0 1356 aa19.43■□□□□ 0.7
MCF2L-205ENST00000397017 MLH3Q9UHC1 1453 aa19.42■□□□□ 0.7
MCF2L-205ENST00000397017 GPRASP1Q5JY77 1395 aa19.42■□□□□ 0.7
MCF2L-205ENST00000397017 COL17A1Q9UMD9 1497 aaPredicted RBP19.41■□□□□ 0.7
MCF2L-205ENST00000397017 HSPA2P54652 639 aa19.41■□□□□ 0.7
MCF2L-205ENST00000397017 ATF3P18847 181 aa19.39■□□□□ 0.7
MCF2L-205ENST00000397017 ZNF428Q96B54 188 aa19.39■□□□□ 0.69
MCF2L-205ENST00000397017 ZNF330Q9Y3S2 320 aaPredicted RBP19.39■□□□□ 0.69
MCF2L-205ENST00000397017 PLEKHH1Q9ULM0 1364 aa19.38■□□□□ 0.69
MCF2L-205ENST00000397017 ACEP12821 1306 aa19.38■□□□□ 0.69
MCF2L-205ENST00000397017 IPO8O15397 1037 aaKnown RBP19.38■□□□□ 0.69
MCF2L-205ENST00000397017 KCNA6P17658 529 aa19.37■□□□□ 0.69
MCF2L-205ENST00000397017 ZNF692Q9BU19 519 aaPredicted RBP19.37■□□□□ 0.69
MCF2L-205ENST00000397017 MIS18AQ9NYP9 233 aa19.37■□□□□ 0.69
MCF2L-205ENST00000397017 SMG6Q86US8 1419 aaKnown RBP19.36■□□□□ 0.69
MCF2L-205ENST00000397017 USHBP1Q8N6Y0 703 aa19.36■□□□□ 0.69
MCF2L-205ENST00000397017 CROCC2H7BZ55 1655 aa19.36■□□□□ 0.69
MCF2L-205ENST00000397017 EIF2S2P20042 333 aaKnown RBP19.36■□□□□ 0.69
MCF2L-205ENST00000397017 TMPOP42166 694 aaKnown RBP19.36■□□□□ 0.69
MCF2L-205ENST00000397017 CALD1Q05682 793 aaKnown RBP19.36■□□□□ 0.69
MCF2L-205ENST00000397017 SLFN5Q08AF3 891 aa19.36■□□□□ 0.69
MCF2L-205ENST00000397017 YTHDC2Q9H6S0 1430 aaKnown RBP19.36■□□□□ 0.69
MCF2L-205ENST00000397017 ZC3H6P61129 1189 aaKnown RBP19.35■□□□□ 0.69
MCF2L-205ENST00000397017 ZKSCAN2Q63HK3 967 aa19.35■□□□□ 0.69
MCF2L-205ENST00000397017 SPINK5Q9NQ38 1064 aaPredicted RBP19.35■□□□□ 0.69
MCF2L-205ENST00000397017 PTPRTO14522 1441 aa19.35■□□□□ 0.69
MCF2L-205ENST00000397017 USP35Q9P2H5 1018 aa19.35■□□□□ 0.69
MCF2L-205ENST00000397017 A0A1W2PP64 1363 aa19.35■□□□□ 0.69
MCF2L-205ENST00000397017 KDM5DQ9BY66 1539 aa19.34■□□□□ 0.69
MCF2L-205ENST00000397017 HSP90AA1P07900 732 aaKnown RBP19.33■□□□□ 0.69
MCF2L-205ENST00000397017 DUSP27Q5VZP5 1158 aa19.33■□□□□ 0.68
MCF2L-205ENST00000397017 MAGI2Q86UL8 1455 aa19.33■□□□□ 0.68
MCF2L-205ENST00000397017 KDM5CP41229 1560 aa19.33■□□□□ 0.68
MCF2L-205ENST00000397017 MS4A1P11836 297 aa19.32■□□□□ 0.68
MCF2L-205ENST00000397017 HSP90AB2PQ58FF8 381 aa19.32■□□□□ 0.68
MCF2L-205ENST00000397017 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
MCF2L-205ENST00000397017 FAM83GA6ND36 823 aa19.32■□□□□ 0.68
MCF2L-205ENST00000397017 LMOD3Q0VAK6 560 aa19.32■□□□□ 0.68
MCF2L-205ENST00000397017 NLRP2Q9NX02 1062 aa19.32■□□□□ 0.68
MCF2L-205ENST00000397017 PLXNC1O60486 1568 aa19.32■□□□□ 0.68
MCF2L-205ENST00000397017 PRKCSHP14314 528 aaPredicted RBP19.32■□□□□ 0.68
MCF2L-205ENST00000397017 ABCA9Q8IUA7 1624 aa19.31■□□□□ 0.68
MCF2L-205ENST00000397017 HECW2Q9P2P5 1572 aa19.31■□□□□ 0.68
MCF2L-205ENST00000397017 MCM10Q7L590 875 aa19.31■□□□□ 0.68
MCF2L-205ENST00000397017 NGEFQ8N5V2 710 aa19.31■□□□□ 0.68
MCF2L-205ENST00000397017 DZIP1LQ8IYY4 767 aaKnown RBP19.3■□□□□ 0.68
MCF2L-205ENST00000397017 STK31Q9BXU1 1019 aa19.3■□□□□ 0.68
MCF2L-205ENST00000397017 TRPM2O94759 1503 aa19.3■□□□□ 0.68
MCF2L-205ENST00000397017 ASXL1Q8IXJ9 1541 aa19.3■□□□□ 0.68
MCF2L-205ENST00000397017 EIF2AK4Q9P2K8 1649 aaKnown RBP19.3■□□□□ 0.68
MCF2L-205ENST00000397017 ANKRD36BQ8N2N9 1353 aa19.3■□□□□ 0.68
MCF2L-205ENST00000397017 TSPYL4Q9UJ04 414 aa19.29■□□□□ 0.68
MCF2L-205ENST00000397017 SPRYD3Q8NCJ5 442 aa19.29■□□□□ 0.68
MCF2L-205ENST00000397017 AEBP1Q8IUX7 1158 aa19.29■□□□□ 0.68
MCF2L-205ENST00000397017 BCORL1Q5H9F3 1711 aa19.28■□□□□ 0.68
MCF2L-205ENST00000397017 METP08581 1390 aa19.28■□□□□ 0.68
MCF2L-205ENST00000397017 RWDD1Q9H446 243 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-205ENST00000397017 POLKQ9UBT6 870 aa19.28■□□□□ 0.68
MCF2L-205ENST00000397017 TEFQ10587 303 aa19.28■□□□□ 0.68
MCF2L-205ENST00000397017 C1orf115Q9H7X2 142 aa19.28■□□□□ 0.68
MCF2L-205ENST00000397017 PHF8Q9UPP1 1060 aa19.27■□□□□ 0.68
MCF2L-205ENST00000397017 CLTCL1P53675 1640 aa19.27■□□□□ 0.68
MCF2L-205ENST00000397017 IQGAP3Q86VI3 1631 aa19.27■□□□□ 0.68
MCF2L-205ENST00000397017 PPIP5K1Q6PFW1 1433 aa19.27■□□□□ 0.68
MCF2L-205ENST00000397017 ABCC3O15438 1527 aa19.26■□□□□ 0.67
MCF2L-205ENST00000397017 CCDC9Q9Y3X0 531 aaKnown RBP19.26■□□□□ 0.67
MCF2L-205ENST00000397017 SLC4A3P48751 1232 aa19.25■□□□□ 0.67
MCF2L-205ENST00000397017 NOB1Q9ULX3 412 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms