RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 CABP1Q9NZU7 370 aa7.2□□□□□ -1.26
RFFL-202ENST00000394597 DIAPH1O60610 1272 aaKnown RBP7.2□□□□□ -1.26
RFFL-202ENST00000394597 TNRQ92752 1358 aa7.2□□□□□ -1.26
RFFL-202ENST00000394597 MLH3Q9UHC1 1453 aa7.2□□□□□ -1.26
RFFL-202ENST00000394597 ATAD2Q6PL18 1390 aa7.19□□□□□ -1.26
RFFL-202ENST00000394597 PNISRQ8TF01 805 aaKnown RBP7.19□□□□□ -1.26
RFFL-202ENST00000394597 APAF1O14727 1248 aa7.19□□□□□ -1.26
RFFL-202ENST00000394597 ZNF692Q9BU19 519 aaPredicted RBP7.19□□□□□ -1.26
RFFL-202ENST00000394597 MTHFSP49914 203 aa7.19□□□□□ -1.26
RFFL-202ENST00000394597 CCDC184Q52MB2 194 aa7.19□□□□□ -1.26
RFFL-202ENST00000394597 WAPLQ7Z5K2 1190 aa7.19□□□□□ -1.26
RFFL-202ENST00000394597 ADAMTS8Q9UP79 889 aa7.19□□□□□ -1.26
RFFL-202ENST00000394597 PSME1Q06323 249 aa7.18□□□□□ -1.26
RFFL-202ENST00000394597 ZMYM3Q14202 1370 aa7.18□□□□□ -1.26
RFFL-202ENST00000394597 RRP7AQ9Y3A4 280 aaKnown RBP7.18□□□□□ -1.26
RFFL-202ENST00000394597 LMOD3Q0VAK6 560 aa7.18□□□□□ -1.26
RFFL-202ENST00000394597 RUNDC1Q96C34 613 aa7.18□□□□□ -1.26
RFFL-202ENST00000394597 CHMP4BQ9H444 224 aaKnown RBP7.18□□□□□ -1.26
RFFL-202ENST00000394597 PDE4CQ08493 712 aa7.17□□□□□ -1.26
RFFL-202ENST00000394597 EIF2AK4Q9P2K8 1649 aaKnown RBP7.17□□□□□ -1.26
RFFL-202ENST00000394597 DISP3Q9P2K9 1392 aa7.17□□□□□ -1.26
RFFL-202ENST00000394597 CDC42BPBQ9Y5S2 1711 aa7.17□□□□□ -1.26
RFFL-202ENST00000394597 E9PSI1 815 aa7.17□□□□□ -1.26
RFFL-202ENST00000394597 YEATS2Q9ULM3 1422 aa7.17□□□□□ -1.26
RFFL-202ENST00000394597 CCDC61Q9Y6R9 512 aa7.17□□□□□ -1.26
RFFL-202ENST00000394597 PROSER2Q86WR7 435 aaPredicted RBP7.16□□□□□ -1.26
RFFL-202ENST00000394597 SPRYD3Q8NCJ5 442 aa7.16□□□□□ -1.26
RFFL-202ENST00000394597 TESK2Q96S53 571 aa7.16□□□□□ -1.26
RFFL-202ENST00000394597 GOLGA6L22H0YM25 854 aa7.16□□□□□ -1.26
RFFL-202ENST00000394597 IPO8O15397 1037 aaKnown RBP7.16□□□□□ -1.26
RFFL-202ENST00000394597 NUDT16Q96DE0 195 aaKnown RBP7.16□□□□□ -1.26
RFFL-202ENST00000394597 ZFYVE16Q7Z3T8 1539 aa7.16□□□□□ -1.26
RFFL-202ENST00000394597 FRAT2O75474 233 aaPredicted RBP7.16□□□□□ -1.26
RFFL-202ENST00000394597 PTMAP06454 111 aaKnown RBP7.16□□□□□ -1.26
RFFL-202ENST00000394597 LTV1Q96GA3 475 aaPredicted RBP7.16□□□□□ -1.26
RFFL-202ENST00000394597 FAM13BQ9NYF5 915 aa7.16□□□□□ -1.26
RFFL-202ENST00000394597 PLXNC1O60486 1568 aa7.16□□□□□ -1.26
RFFL-202ENST00000394597 MAGI2Q86UL8 1455 aa7.16□□□□□ -1.26
RFFL-202ENST00000394597 ATF3P18847 181 aa7.16□□□□□ -1.26
RFFL-202ENST00000394597 ABCA9Q8IUA7 1624 aa7.15□□□□□ -1.26
RFFL-202ENST00000394597 KDM5DQ9BY66 1539 aa7.15□□□□□ -1.26
RFFL-202ENST00000394597 RIMS2Q9UQ26 1411 aa7.15□□□□□ -1.26
RFFL-202ENST00000394597 CSB-PGBD3P0DP91 1061 aa7.15□□□□□ -1.26
RFFL-202ENST00000394597 PMFBP1Q8TBY8 1022 aa7.15□□□□□ -1.26
RFFL-202ENST00000394597 AMOTL2Q9Y2J4 779 aa7.15□□□□□ -1.26
RFFL-202ENST00000394597 NPATQ14207 1427 aa7.15□□□□□ -1.27
RFFL-202ENST00000394597 NSD3Q9BZ95 1437 aa7.15□□□□□ -1.27
RFFL-202ENST00000394597 WASLO00401 505 aaPredicted RBP7.15□□□□□ -1.27
RFFL-202ENST00000394597 NLRP6P59044 892 aa7.14□□□□□ -1.27
RFFL-202ENST00000394597 A0A0G2JS52 829 aa7.14□□□□□ -1.27
RFFL-202ENST00000394597 RIPK4P57078 832 aa7.14□□□□□ -1.27
RFFL-202ENST00000394597 PUS7Q96PZ0 661 aaKnown RBP7.14□□□□□ -1.27
RFFL-202ENST00000394597 HECW2Q9P2P5 1572 aa7.14□□□□□ -1.27
RFFL-202ENST00000394597 ESCO1Q5FWF5 840 aa7.13□□□□□ -1.27
RFFL-202ENST00000394597 GPRASP1Q5JY77 1395 aa7.13□□□□□ -1.27
RFFL-202ENST00000394597 CROCC2H7BZ55 1655 aa7.13□□□□□ -1.27
RFFL-202ENST00000394597 PTPRTO14522 1441 aa7.13□□□□□ -1.27
RFFL-202ENST00000394597 EXOC6Q8TAG9 804 aa7.13□□□□□ -1.27
RFFL-202ENST00000394597 TCP11L2Q8N4U5 519 aa7.12□□□□□ -1.27
RFFL-202ENST00000394597 ABTB2Q8N961 1025 aa7.12□□□□□ -1.27
RFFL-202ENST00000394597 SMC4Q9NTJ3 1288 aa7.12□□□□□ -1.27
RFFL-202ENST00000394597 CHMP4AQ9BY43 222 aa7.12□□□□□ -1.27
RFFL-202ENST00000394597 TSPOAP1O95153 1857 aa7.12□□□□□ -1.27
RFFL-202ENST00000394597 RRP1P56182 461 aaKnown RBP7.12□□□□□ -1.27
RFFL-202ENST00000394597 CFAP65Q6ZU64 1925 aaKnown RBP7.12□□□□□ -1.27
RFFL-202ENST00000394597 PLA2R1Q13018 1463 aa7.12□□□□□ -1.27
RFFL-202ENST00000394597 NINLQ9Y2I6 1382 aa7.12□□□□□ -1.27
RFFL-202ENST00000394597 HMOX1P09601 288 aa7.12□□□□□ -1.27
RFFL-202ENST00000394597 NUTM2GQ5VZR2 741 aa7.12□□□□□ -1.27
RFFL-202ENST00000394597 TPM2P07951 284 aa7.11□□□□□ -1.27
RFFL-202ENST00000394597 RBM10P98175 930 aaKnown RBP7.11□□□□□ -1.27
RFFL-202ENST00000394597 SPATA31E1Q6ZUB1 1445 aa7.11□□□□□ -1.27
RFFL-202ENST00000394597 TRPM2O94759 1503 aa7.11□□□□□ -1.27
RFFL-202ENST00000394597 IQGAP3Q86VI3 1631 aa7.11□□□□□ -1.27
RFFL-202ENST00000394597 CDCA7LQ96GN5 454 aa7.1□□□□□ -1.27
RFFL-202ENST00000394597 RIMBP3CA6NJZ7 1639 aa7.1□□□□□ -1.27
RFFL-202ENST00000394597 RIMBP3BA6NNM3 1639 aa7.1□□□□□ -1.27
RFFL-202ENST00000394597 RIMBP3Q9UFD9 1639 aa7.1□□□□□ -1.27
RFFL-202ENST00000394597 BACH2Q9BYV9 841 aa7.1□□□□□ -1.27
RFFL-202ENST00000394597 PLIN1O60240 522 aa7.1□□□□□ -1.27
RFFL-202ENST00000394597 MAP7D2Q96T17 732 aa7.1□□□□□ -1.27
RFFL-202ENST00000394597 UNC13BO14795 1591 aa7.1□□□□□ -1.27
RFFL-202ENST00000394597 PER1O15534 1290 aaPredicted RBP7.09□□□□□ -1.27
RFFL-202ENST00000394597 FAM161AQ3B820 660 aa7.09□□□□□ -1.27
RFFL-202ENST00000394597 KLHL34Q8N239 644 aa7.09□□□□□ -1.27
RFFL-202ENST00000394597 ITPRIPQ8IWB1 547 aa7.09□□□□□ -1.27
RFFL-202ENST00000394597 STK31Q9BXU1 1019 aa7.09□□□□□ -1.27
RFFL-202ENST00000394597 NSD2O96028 1365 aa7.09□□□□□ -1.27
RFFL-202ENST00000394597 YTHDC2Q9H6S0 1430 aaKnown RBP7.09□□□□□ -1.27
RFFL-202ENST00000394597 TULP1O00294 542 aaPredicted RBP7.09□□□□□ -1.27
RFFL-202ENST00000394597 PRKAR2BP31323 418 aa7.09□□□□□ -1.27
RFFL-202ENST00000394597 RWDD1Q9H446 243 aaPredicted RBP7.09□□□□□ -1.27
RFFL-202ENST00000394597 COL17A1Q9UMD9 1497 aaPredicted RBP7.09□□□□□ -1.27
RFFL-202ENST00000394597 TET3O43151 1660 aa7.09□□□□□ -1.27
RFFL-202ENST00000394597 CLUAP1Q96AJ1 413 aa7.09□□□□□ -1.28
RFFL-202ENST00000394597 TBX22Q9Y458 520 aa7.09□□□□□ -1.28
RFFL-202ENST00000394597 SMG6Q86US8 1419 aaKnown RBP7.09□□□□□ -1.28
RFFL-202ENST00000394597 GNAI1P63096 354 aa7.08□□□□□ -1.28
RFFL-202ENST00000394597 ANKRD36BQ8N2N9 1353 aa7.08□□□□□ -1.28
RFFL-202ENST00000394597 ELL2O00472 640 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms