RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 KIF1BO60333 1816 aa24.02■■□□□ 1.44
HOXC6-202ENST00000394331 ABCA6Q8N139 1617 aa24.02■■□□□ 1.44
HOXC6-202ENST00000394331 PLEKHG5O94827 1062 aa24.01■■□□□ 1.43
HOXC6-202ENST00000394331 MAPK8IP3Q9UPT6 1336 aa24.01■■□□□ 1.43
HOXC6-202ENST00000394331 NRXN1Q9ULB1 1477 aa24.01■■□□□ 1.43
HOXC6-202ENST00000394331 ERVK-7P63135 1459 aa24.01■■□□□ 1.43
HOXC6-202ENST00000394331 SBNO2Q9Y2G9 1366 aa24■■□□□ 1.43
HOXC6-202ENST00000394331 MCM4P33991 863 aa24■■□□□ 1.43
HOXC6-202ENST00000394331 RGS3P49796 1198 aa24■■□□□ 1.43
HOXC6-202ENST00000394331 ZNF521Q96K83 1311 aa23.99■■□□□ 1.43
HOXC6-202ENST00000394331 PPRC1Q5VV67 1664 aaKnown RBP23.99■■□□□ 1.43
HOXC6-202ENST00000394331 PRDM4Q9UKN5 801 aa23.99■■□□□ 1.43
HOXC6-202ENST00000394331 PLEKHH1Q9ULM0 1364 aa23.99■■□□□ 1.43
HOXC6-202ENST00000394331 GOLGA2Q08379 1002 aa23.98■■□□□ 1.43
HOXC6-202ENST00000394331 SLKQ9H2G2 1235 aaPredicted RBP23.98■■□□□ 1.43
HOXC6-202ENST00000394331 MYH16Q9H6N6 1097 aa23.98■■□□□ 1.43
HOXC6-202ENST00000394331 DUSP27Q5VZP5 1158 aa23.97■■□□□ 1.43
HOXC6-202ENST00000394331 IFT172Q9UG01 1749 aa23.96■■□□□ 1.43
HOXC6-202ENST00000394331 TERF1P54274 439 aa23.96■■□□□ 1.43
HOXC6-202ENST00000394331 ADGRB3O60242 1522 aa23.95■■□□□ 1.42
HOXC6-202ENST00000394331 MLH3Q9UHC1 1453 aa23.95■■□□□ 1.42
HOXC6-202ENST00000394331 GRPEL1Q9HAV7 217 aa23.94■■□□□ 1.42
HOXC6-202ENST00000394331 CD109Q6YHK3 1445 aa23.94■■□□□ 1.42
HOXC6-202ENST00000394331 POGZQ7Z3K3 1410 aa23.94■■□□□ 1.42
HOXC6-202ENST00000394331 CFAP74Q9C0B2 1584 aa23.94■■□□□ 1.42
HOXC6-202ENST00000394331 ERBB4Q15303 1308 aa23.93■■□□□ 1.42
HOXC6-202ENST00000394331 SETBP1Q9Y6X0 1596 aa23.93■■□□□ 1.42
HOXC6-202ENST00000394331 NOS1P29475 1434 aa23.93■■□□□ 1.42
HOXC6-202ENST00000394331 MAP7D2Q96T17 732 aa23.93■■□□□ 1.42
HOXC6-202ENST00000394331 MYO3AQ8NEV4 1616 aa23.92■■□□□ 1.42
HOXC6-202ENST00000394331 NGEFQ8N5V2 710 aa23.92■■□□□ 1.42
HOXC6-202ENST00000394331 CHGAP10645 457 aaKnown RBP23.92■■□□□ 1.42
HOXC6-202ENST00000394331 CARD14Q9BXL6 1004 aa23.91■■□□□ 1.42
HOXC6-202ENST00000394331 MROH2AA6NES4 1674 aa23.91■■□□□ 1.42
HOXC6-202ENST00000394331 RPGRIP1LQ68CZ1 1315 aa23.91■■□□□ 1.42
HOXC6-202ENST00000394331 NPATQ14207 1427 aa23.91■■□□□ 1.42
HOXC6-202ENST00000394331 TRAK2O60296 914 aa23.9■■□□□ 1.42
HOXC6-202ENST00000394331 SLFN5Q08AF3 891 aa23.9■■□□□ 1.42
HOXC6-202ENST00000394331 TBC1D32Q96NH3 1257 aa23.9■■□□□ 1.42
HOXC6-202ENST00000394331 OSCARQ8IYS5 282 aa23.89■■□□□ 1.42
HOXC6-202ENST00000394331 TBC1D2Q9BYX2 928 aa23.89■■□□□ 1.42
HOXC6-202ENST00000394331 C14orf93Q9H972 538 aaKnown RBP23.89■■□□□ 1.42
HOXC6-202ENST00000394331 GGT6Q6P531 493 aa23.88■■□□□ 1.41
HOXC6-202ENST00000394331 UPF2Q9HAU5 1272 aaKnown RBP23.88■■□□□ 1.41
HOXC6-202ENST00000394331 SEC24BO95487 1268 aa23.88■■□□□ 1.41
HOXC6-202ENST00000394331 NINLQ9Y2I6 1382 aa23.87■■□□□ 1.41
HOXC6-202ENST00000394331 DDX11L8A8MPP1 907 aa23.87■■□□□ 1.41
HOXC6-202ENST00000394331 TRMT2AQ8IZ69 625 aaKnown RBP23.87■■□□□ 1.41
HOXC6-202ENST00000394331 TRIM44Q96DX7 344 aaPredicted RBP23.87■■□□□ 1.41
HOXC6-202ENST00000394331 CHMP5Q9NZZ3 219 aa23.87■■□□□ 1.41
HOXC6-202ENST00000394331 FRMPD1Q5SYB0 1578 aa23.86■■□□□ 1.41
HOXC6-202ENST00000394331 CCDC146Q8IYE0 955 aa23.86■■□□□ 1.41
HOXC6-202ENST00000394331 HECW2Q9P2P5 1572 aa23.85■■□□□ 1.41
HOXC6-202ENST00000394331 APAF1O14727 1248 aa23.85■■□□□ 1.41
HOXC6-202ENST00000394331 RBM10P98175 930 aaKnown RBP23.85■■□□□ 1.41
HOXC6-202ENST00000394331 POLR3AO14802 1390 aaPredicted RBP23.84■■□□□ 1.41
HOXC6-202ENST00000394331 TRAK1Q9UPV9 953 aa23.83■■□□□ 1.41
HOXC6-202ENST00000394331 E9PSI1 815 aa23.82■■□□□ 1.4
HOXC6-202ENST00000394331 AAMPQ13685 434 aa23.82■■□□□ 1.4
HOXC6-202ENST00000394331 CGNL1Q0VF96 1302 aa23.82■■□□□ 1.4
HOXC6-202ENST00000394331 KIAA1211Q6ZU35 1233 aa23.81■■□□□ 1.4
HOXC6-202ENST00000394331 ARXQ96QS3 562 aa23.81■■□□□ 1.4
HOXC6-202ENST00000394331 GZF1Q9H116 711 aaPredicted RBP23.81■■□□□ 1.4
HOXC6-202ENST00000394331 ABCC3O15438 1527 aa23.81■■□□□ 1.4
HOXC6-202ENST00000394331 PPLO60437 1756 aa23.8■■□□□ 1.4
HOXC6-202ENST00000394331 OFD1O75665 1012 aa23.8■■□□□ 1.4
HOXC6-202ENST00000394331 NKTRP30414 1462 aaKnown RBP23.8■■□□□ 1.4
HOXC6-202ENST00000394331 ADGRB1O14514 1584 aa23.8■■□□□ 1.4
HOXC6-202ENST00000394331 IGHDP01880 384 aa23.79■■□□□ 1.4
HOXC6-202ENST00000394331 NEO1Q92859 1461 aa23.79■■□□□ 1.4
HOXC6-202ENST00000394331 NSD3Q9BZ95 1437 aa23.78■■□□□ 1.4
HOXC6-202ENST00000394331 MORC1Q86VD1 984 aa23.78■■□□□ 1.4
HOXC6-202ENST00000394331 SMAP1Q8IYB5 467 aaPredicted RBP23.78■■□□□ 1.4
HOXC6-202ENST00000394331 PUS7Q96PZ0 661 aaKnown RBP23.78■■□□□ 1.4
HOXC6-202ENST00000394331 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.77■■□□□ 1.4
HOXC6-202ENST00000394331 PDE3AQ14432 1141 aa23.77■■□□□ 1.4
HOXC6-202ENST00000394331 VGFO15240 615 aaPredicted RBP23.76■■□□□ 1.39
HOXC6-202ENST00000394331 MTERF4Q7Z6M4 381 aaKnown RBP23.76■■□□□ 1.39
HOXC6-202ENST00000394331 PPP1R9BQ96SB3 815 aa23.75■■□□□ 1.39
HOXC6-202ENST00000394331 SLC12A5Q9H2X9 1139 aa23.75■■□□□ 1.39
HOXC6-202ENST00000394331 NCOA3Q9Y6Q9 1424 aa23.75■■□□□ 1.39
HOXC6-202ENST00000394331 PTMSP20962 102 aa23.75■■□□□ 1.39
HOXC6-202ENST00000394331 CCDC173Q0VFZ6 552 aa23.75■■□□□ 1.39
HOXC6-202ENST00000394331 TMEM132EQ6IEE7 984 aa23.75■■□□□ 1.39
HOXC6-202ENST00000394331 SPINK5Q9NQ38 1064 aaPredicted RBP23.74■■□□□ 1.39
HOXC6-202ENST00000394331 QRICH2Q9H0J4 1663 aa23.74■■□□□ 1.39
HOXC6-202ENST00000394331 ZSCAN30Q86W11 494 aa23.73■■□□□ 1.39
HOXC6-202ENST00000394331 ZC3H13Q5T200 1668 aaKnown RBP23.72■■□□□ 1.39
HOXC6-202ENST00000394331 RIPK4P57078 832 aa23.72■■□□□ 1.39
HOXC6-202ENST00000394331 CAMSAP1Q5T5Y3 1602 aa23.72■■□□□ 1.39
HOXC6-202ENST00000394331 CLUAP1Q96AJ1 413 aa23.71■■□□□ 1.39
HOXC6-202ENST00000394331 EVC2Q86UK5 1308 aa23.71■■□□□ 1.39
HOXC6-202ENST00000394331 SKOR2Q2VWA4 1001 aaPredicted RBP23.71■■□□□ 1.39
HOXC6-202ENST00000394331 RAPGEF3O95398 923 aa23.7■■□□□ 1.39
HOXC6-202ENST00000394331 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
HOXC6-202ENST00000394331 FGD1P98174 961 aa23.7■■□□□ 1.38
HOXC6-202ENST00000394331 CFAP65Q6ZU64 1925 aaKnown RBP23.69■■□□□ 1.38
HOXC6-202ENST00000394331 WWC1Q8IX03 1113 aa23.69■■□□□ 1.38
HOXC6-202ENST00000394331 ZNF692Q9BU19 519 aaPredicted RBP23.69■■□□□ 1.38
HOXC6-202ENST00000394331 RUNDC1Q96C34 613 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms