RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 NBPF8Q3BBV2 869 aa22.99■■□□□ 1.27
CSHL1-204ENST00000392824 TIMELESSQ9UNS1 1208 aa22.99■■□□□ 1.27
CSHL1-204ENST00000392824 DLC1Q96QB1 1528 aa22.97■■□□□ 1.27
CSHL1-204ENST00000392824 KNDC1Q76NI1 1749 aa22.96■■□□□ 1.27
CSHL1-204ENST00000392824 ROCK2O75116 1388 aaKnown RBP22.96■■□□□ 1.27
CSHL1-204ENST00000392824 KIAA1210Q9ULL0 1709 aa22.94■■□□□ 1.26
CSHL1-204ENST00000392824 MST1RQ04912 1400 aa22.94■■□□□ 1.26
CSHL1-204ENST00000392824 BRINP3Q76B58 766 aa22.94■■□□□ 1.26
CSHL1-204ENST00000392824 MINK1Q8N4C8 1332 aaPredicted RBP22.93■■□□□ 1.26
CSHL1-204ENST00000392824 NUTM2FA1L443 756 aa22.93■■□□□ 1.26
CSHL1-204ENST00000392824 NALCNQ8IZF0 1738 aa22.92■■□□□ 1.26
CSHL1-204ENST00000392824 HIRIP3Q9BW71 556 aaPredicted RBP22.92■■□□□ 1.26
CSHL1-204ENST00000392824 C1orf167Q5SNV9 1468 aa22.91■■□□□ 1.26
CSHL1-204ENST00000392824 ESCO1Q5FWF5 840 aa22.9■■□□□ 1.26
CSHL1-204ENST00000392824 CARD11Q9BXL7 1154 aa22.9■■□□□ 1.26
CSHL1-204ENST00000392824 ORAI2Q96SN7 254 aa22.89■■□□□ 1.25
CSHL1-204ENST00000392824 ROBO1Q9Y6N7 1651 aa22.89■■□□□ 1.25
CSHL1-204ENST00000392824 CENPJQ9HC77 1338 aaPredicted RBP22.87■■□□□ 1.25
CSHL1-204ENST00000392824 CDC42BPGQ6DT37 1551 aa22.87■■□□□ 1.25
CSHL1-204ENST00000392824 WASLO00401 505 aaPredicted RBP22.86■■□□□ 1.25
CSHL1-204ENST00000392824 GPRASP1Q5JY77 1395 aa22.85■■□□□ 1.25
CSHL1-204ENST00000392824 TRPM1Q7Z4N2 1603 aa22.85■■□□□ 1.25
CSHL1-204ENST00000392824 EIF3AQ14152 1382 aaKnown RBP22.84■■□□□ 1.25
CSHL1-204ENST00000392824 RALGAPBQ86X10 1494 aa22.81■■□□□ 1.24
CSHL1-204ENST00000392824 DDX17Q92841 729 aaKnown RBP22.81■■□□□ 1.24
CSHL1-204ENST00000392824 CDK19Q9BWU1 502 aa22.81■■□□□ 1.24
CSHL1-204ENST00000392824 FOXO3O43524 673 aa22.79■■□□□ 1.24
CSHL1-204ENST00000392824 PHF8Q9UPP1 1060 aa22.79■■□□□ 1.24
CSHL1-204ENST00000392824 ARHGEF28Q8N1W1 1705 aaKnown RBP22.79■■□□□ 1.24
CSHL1-204ENST00000392824 LRRC59Q96AG4 307 aaKnown RBP22.78■■□□□ 1.24
CSHL1-204ENST00000392824 NPHP3Q7Z494 1330 aa22.78■■□□□ 1.24
CSHL1-204ENST00000392824 ANKARQ7Z5J8 1434 aa22.77■■□□□ 1.24
CSHL1-204ENST00000392824 SRPK2P78362 688 aaKnown RBP22.76■■□□□ 1.23
CSHL1-204ENST00000392824 NUDT16Q96DE0 195 aaKnown RBP22.76■■□□□ 1.23
CSHL1-204ENST00000392824 ADGRB2O60241 1585 aa22.76■■□□□ 1.23
CSHL1-204ENST00000392824 AHDC1Q5TGY3 1603 aaPredicted RBP22.75■■□□□ 1.23
CSHL1-204ENST00000392824 JCADQ9P266 1359 aa22.75■■□□□ 1.23
CSHL1-204ENST00000392824 PHLPP1O60346 1717 aa22.74■■□□□ 1.23
CSHL1-204ENST00000392824 FMN2Q9NZ56 1722 aa22.74■■□□□ 1.23
CSHL1-204ENST00000392824 PMFBP1Q8TBY8 1022 aa22.74■■□□□ 1.23
CSHL1-204ENST00000392824 EVC2Q86UK5 1308 aa22.74■■□□□ 1.23
CSHL1-204ENST00000392824 SOS2Q07890 1332 aaPredicted RBP22.73■■□□□ 1.23
CSHL1-204ENST00000392824 PRR36Q9H6K5 1346 aa22.73■■□□□ 1.23
CSHL1-204ENST00000392824 PSME1Q06323 249 aa22.72■■□□□ 1.23
CSHL1-204ENST00000392824 CABP2Q9NPB3 220 aa22.72■■□□□ 1.23
CSHL1-204ENST00000392824 XPCQ01831 940 aaPredicted RBP22.71■■□□□ 1.23
CSHL1-204ENST00000392824 KRT28Q7Z3Y7 464 aa22.71■■□□□ 1.23
CSHL1-204ENST00000392824 CCDC61Q9Y6R9 512 aa22.71■■□□□ 1.23
CSHL1-204ENST00000392824 TULP4Q9NRJ4 1543 aa22.71■■□□□ 1.23
CSHL1-204ENST00000392824 NGDNQ8NEJ9 315 aaKnown RBP22.7■■□□□ 1.22
CSHL1-204ENST00000392824 ST20-MTHFSA0A0A6YYL1 179 aa22.69■■□□□ 1.22
CSHL1-204ENST00000392824 SLC24A1O60721 1099 aa22.69■■□□□ 1.22
CSHL1-204ENST00000392824 COL16A1Q07092 1604 aaPredicted RBP22.68■■□□□ 1.22
CSHL1-204ENST00000392824 SPATA31A6Q5VVP1 1343 aa22.66■■□□□ 1.22
CSHL1-204ENST00000392824 NHSL1Q5SYE7 1610 aa22.66■■□□□ 1.22
CSHL1-204ENST00000392824 QRICH2Q9H0J4 1663 aa22.65■■□□□ 1.22
CSHL1-204ENST00000392824 USP47Q96K76 1375 aa22.64■■□□□ 1.22
CSHL1-204ENST00000392824 SBNO2Q9Y2G9 1366 aa22.64■■□□□ 1.22
CSHL1-204ENST00000392824 PLEKHG3A1L390 1219 aa22.64■■□□□ 1.21
CSHL1-204ENST00000392824 KIF1AQ12756 1690 aa22.63■■□□□ 1.21
CSHL1-204ENST00000392824 ATP7BP35670 1465 aa22.63■■□□□ 1.21
CSHL1-204ENST00000392824 NUTM2BA6NNL0 878 aaPredicted RBP22.63■■□□□ 1.21
CSHL1-204ENST00000392824 NUTM2EB1AL46 878 aaPredicted RBP22.63■■□□□ 1.21
CSHL1-204ENST00000392824 NUTM2AQ8IVF1 878 aaPredicted RBP22.63■■□□□ 1.21
CSHL1-204ENST00000392824 USP32Q8NFA0 1604 aa22.62■■□□□ 1.21
CSHL1-204ENST00000392824 CABP1Q9NZU7 370 aa22.62■■□□□ 1.21
CSHL1-204ENST00000392824 DISP3Q9P2K9 1392 aa22.62■■□□□ 1.21
CSHL1-204ENST00000392824 PXDNQ92626 1479 aa22.61■■□□□ 1.21
CSHL1-204ENST00000392824 LMOD2Q6P5Q4 547 aa22.61■■□□□ 1.21
CSHL1-204ENST00000392824 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
CSHL1-204ENST00000392824 PNPLA6Q8IY17 1366 aa22.61■■□□□ 1.21
CSHL1-204ENST00000392824 ACEP12821 1306 aa22.6■■□□□ 1.21
CSHL1-204ENST00000392824 SPATA31A3Q5VYP0 1347 aa22.6■■□□□ 1.21
CSHL1-204ENST00000392824 MEX3CQ5U5Q3 659 aaKnown RBP22.6■■□□□ 1.21
CSHL1-204ENST00000392824 TESK2Q96S53 571 aa22.6■■□□□ 1.21
CSHL1-204ENST00000392824 RGPD8O14715 1765 aaPredicted RBP22.6■■□□□ 1.21
CSHL1-204ENST00000392824 PPIP5K1Q6PFW1 1433 aa22.59■■□□□ 1.21
CSHL1-204ENST00000392824 PAK3O75914 559 aaPredicted RBP22.59■■□□□ 1.21
CSHL1-204ENST00000392824 TMF1P82094 1093 aa22.58■■□□□ 1.21
CSHL1-204ENST00000392824 SBNO1A3KN83 1393 aa22.58■■□□□ 1.21
CSHL1-204ENST00000392824 ATAD2Q6PL18 1390 aa22.58■■□□□ 1.21
CSHL1-204ENST00000392824 EIF4G2P78344 907 aaKnown RBP eCLIP22.57■■□□□ 1.2
CSHL1-204ENST00000392824 PUS7Q96PZ0 661 aaKnown RBP22.57■■□□□ 1.2
CSHL1-204ENST00000392824 POLR3AO14802 1390 aaPredicted RBP22.55■■□□□ 1.2
CSHL1-204ENST00000392824 TMC1Q8TDI8 760 aa22.55■■□□□ 1.2
CSHL1-204ENST00000392824 MED1Q15648 1581 aaPredicted RBP22.55■■□□□ 1.2
CSHL1-204ENST00000392824 TNS3Q68CZ2 1445 aa22.54■■□□□ 1.2
CSHL1-204ENST00000392824 ARHGEF10O15013 1369 aa22.53■■□□□ 1.2
CSHL1-204ENST00000392824 SHPRHQ149N8 1683 aa22.53■■□□□ 1.2
CSHL1-204ENST00000392824 HAP1P54257 671 aaPredicted RBP22.53■■□□□ 1.2
CSHL1-204ENST00000392824 CDCA8Q53HL2 280 aa22.53■■□□□ 1.2
CSHL1-204ENST00000392824 ZNF692Q9BU19 519 aaPredicted RBP22.53■■□□□ 1.2
CSHL1-204ENST00000392824 ITSN1Q15811 1721 aa22.52■■□□□ 1.2
CSHL1-204ENST00000392824 PLEKHG5O94827 1062 aa22.52■■□□□ 1.2
CSHL1-204ENST00000392824 ADAMTS2O95450 1211 aa22.52■■□□□ 1.2
CSHL1-204ENST00000392824 HSPA5P11021 654 aaKnown RBP22.5■■□□□ 1.19
CSHL1-204ENST00000392824 SLC12A5Q9H2X9 1139 aa22.48■■□□□ 1.19
CSHL1-204ENST00000392824 LRP6O75581 1613 aa22.48■■□□□ 1.19
CSHL1-204ENST00000392824 TOPAZ1Q8N9V7 1692 aa22.47■■□□□ 1.19
CSHL1-204ENST00000392824 HDGFL2Q7Z4V5 671 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms